KEGG   Solea solea (common sole): 131464439
Entry
131464439         CDS       T10853                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131464439 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssoe03041]
    131464439 (sf3a1)
Spliceosome [BR:ssoe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    131464439 (sf3a1)
 Complex B
    131464439 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    131464439 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2 Phage_p2_ORF12
Other DBs
NCBI-GeneID: 131464439
NCBI-ProteinID: XP_058492896
LinkDB
Position
8:2144860..2149623
AA seq 780 aa
MSPGPVQIVQPEPNNKIDAPVEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNLNDPYHSYYRHKVNEFKEGKGQEPSAAVPKVMQQAMLQAQQLPQ
KVIQEAVIPKEPPSEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQ
FDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKKEAENPKEVMDQVRYRVEWAKFQE
RERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQERY
EKYGESEEVEMEVESEDEDDVREDRGSGHPSQPDQDTQVQDMDEGSDDEDMGMKAPLPPD
NPMPPPLPPTPDQVIIRKDYDPKASKPQPSIIATDEYLISPITGEKIPASKMQEHMRIGL
LDPRWLEQRDRVIKERQIEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEI
QKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSKPNDI
HHQPPMPSSMPKPNPPMNSMPRPPLSMAPPVRTTLLSAVPVLPRPPGSPVVRLGPGQVLS
SVPHAPMMSAPRINVVPMPPSAPHIMAPRPPPMVVPTAFVPAPPVPQPPSSAPAPPSHPP
PPHDDEPVSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFTVPL
TDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGSVIHLALKERGGRKK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgtcgcccgggcctgtccagatagttcagccggagcccaacaataagattgatgcacca
gtagaggaaaccccagctactaagccaattgttggcatcatatatccgcctcctgaggtc
agaaacatagttgacaagacagccagctttgttgccaggaatggtcccgagtttgaagca
agaattcgtcaaaatgagatcaacaatccaaaattcaatttcctcaacctcaatgaccca
taccattcctactaccgtcacaaggttaatgaatttaaagagggcaaaggacaggaaccc
tctgcagcagtgcccaaggttatgcagcaggccatgctgcaagcccagcagctgcctcaa
aaagtaattcaggaggcagtgattcccaaagaacctccttctgagtttgagttcattgca
gaccctccgtcaatctcagcatttgacctggatgttgtcaaactcactgcccagtttgtt
gctcgcaatggccgccagttcctcactcagctcatgcagaaagaacagaggaactaccag
tttgactttctgcggccgcagcacagcctttttaattatttcaccaaactggttgagcag
tacactaagatactcatccctcccaaaggcctattaaccaagctgaagaaggaggctgag
aatccaaaagaggttatggaccaggtacgataccgtgttgagtgggcaaagttccaggag
cgtgagagaaagaaggaagaggaggaaagagagaaagaaagggtggcatatgcccaaatt
gattggcatgactttgtagtggtcgaaactgtggatttccagcccaatgaacaaggccac
ttccctccaccaaccacaccagaggagcttggtgctcgtatcctcatccaagagcgctat
gagaagtatggagagagtgaggaggtggagatggaggttgagagtgaagatgaagatgat
gtgagagaggacagaggcagtgggcatccctcacagcctgatcaagacacacaagttcag
gacatggacgagggatctgatgacgaggatatgggcatgaaggctcctctgccaccagac
aatccaatgccacctccattgcctccaactccagaccaggttatcatccgcaaagactat
gaccccaaagcctccaagcctcagccttcaatcattgccacggatgagtacctcatctca
cccattactggcgagaagatcccagccagtaagatgcaagagcacatgcgaattggtctg
ctggatccacgctggctggagcaaagagatcgtgttatcaaagagaggcagatagaagat
gaagtctatgctcctggtttggatattgagagcagcctgaaacagctggctgagaggcgt
actgatatttttggtgtggaagagactgctattggtaagaagattggtgaagaggaaatc
cagaagccagaggaaaaggtcacttgggatggccactctggaagtatggctcgtacacag
caggcagcacaggccaacattaccctgcaagagcaaattgaagccattcacaaagccaaa
gggctcgtcggagaggatgataccaaggagaaaattggcccaagcaaaccaaatgatatt
catcaccagcctcccatgccctcctctatgccgaaaccaaatcctcccatgaattcaatg
ccccgtccacccctatctatggcacctccagtgcgcaccactcttctgtctgctgtacct
gtacttccaaggccgcctgggtccccggtggtgcgccttggaccaggacaagttttaagc
tcagtcccccacgctcccatgatgtctgcgccccgtatcaatgtggttcccatgccacca
tcagcaccccacatcatggccccaagaccacctcccatggttgttccaactgcatttgtt
ccggctccaccagtgccacaaccaccaagctctgctcctgcaccgccttctcacccacct
ccacctcacgacgacgagccggtcagtaagaaaatgaagaccgaggacaacctcattcca
gaggaggagttcctgcgcagaaataagggccccgtggcagttaaagtacaggttcccaac
atgcaggacaagacggaatggaagctaaatggccaagtgctgaatttcactgtccctctc
acagaccaggtgtcggttattaaagtcaaaatccatgaagccacaggcatgccagcagga
aaacagaagttacaatacgagggcatttttatcaaggattccaactctttggcttactac
aatatgaacaacggttcagtcatccacttggcactgaaggagagaggtggacgaaagaag
tga

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