Solea solea (common sole): 131464652
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Entry
131464652 CDS
T10853
Symbol
smarcb1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03082
ATP-dependent chromatin remodeling
ssoe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131464652 (smarcb1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131464652 (smarcb1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssoe01009
]
131464652 (smarcb1a)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoe03021
]
131464652 (smarcb1a)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131464652 (smarcb1a)
Protein phosphatases and associated proteins [BR:
ssoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131464652 (smarcb1a)
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131464652 (smarcb1a)
SWI/SNF complex
131464652 (smarcb1a)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131464652 (smarcb1a)
PBAF complex
131464652 (smarcb1a)
SWI/SNF complex
131464652 (smarcb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
131464652
NCBI-ProteinID:
XP_058493245
LinkDB
All DBs
Position
8:complement(29257100..29263850)
Genome browser
AA seq
374 aa
AA seq
DB search
MMALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVEERKK
IVESSHDHGYTQLATSVTLLKASEVEEILEGNDEKYKAISISTEPPAYLREQKAKRNSQW
VPTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQSEVLVPIRL
DMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESYPTD
SILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTI
AYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRN
TRRMRRLANTAPAW
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgctgagtaaaacgtttggacaaaaaccggtgaaattccagctggaggaggac
ggagacttttacatgatcggatcagaggtgggaaactacctgcgcatgttcagaggttct
ctgtataaaagatatccgtcattatggaggaaactggcctcagtagaagagcgaaagaaa
atcgtggagtcgtcacacgatcacggctacactcagctcgccaccagtgtgactctgctg
aaggcgtccgaggtcgaggagatccttgaaggaaacgatgagaaatacaaagctatttcc
atcagcactgaacctccggcctacctcagggaacagaaggcaaagaggaacagtcagtgg
gttcccacgctgcccaacagttctcaccacctggacgcagttccctgctccaccaccatc
aaccgcagccgactgggccgagacaagaagaggacgttcccactgtgctttgatgaccac
gatccagcggtgatccacgagaacgccactcagtccgaagtcctggtcccgatccgtctg
gacatggagatcgaaggacagaagctcagagacgcgttcacctggaacatgaacgagaag
ctcatgacgcccgagatgttcgctgagatcctctgtgacgacctggacctcaacccgctg
accttcgtccccgccatcgcgtccgccatcagacagcagatcgagtcttaccccacagac
agtatcctggaggagcagacggaccagagggtcatcatcaagctgaacatccacgtgggg
aacatctcgctggtggaccagtttgagtgggacatgtcggagcgggagaactctccagag
aagtttgccctgaagctctgctccgagctgggcctgggcggagagttcgtcaccaccatc
gcctacagcatccgcggtcagctgagctggcaccagaggacctacgccttcagtgaaaac
cctctgcccaccgtggagatcgccatcagaaacacgggcgacgcagaccagtggtgcccc
ctgctggagacgctgacagacgcagagatggagaagaagatcagagaccaggacagaaac
accaggagaatgaggcgactggcgaacacggctcctgcgtggtag
DBGET
integrated database retrieval system
