Solea solea (common sole): 131465128
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Entry
131465128 CDS
T10853
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03460
Fanconi anemia pathway
ssoe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
131465128 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
131465128 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131465128 (her6)
03400 DNA repair and recombination proteins [BR:
ssoe03400
]
131465128 (her6)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
131465128 (her6)
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
131465128 (her6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
131465128
NCBI-ProteinID:
XP_058493476
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Position
9:12194049..12195811
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AA seq
277 aa
AA seq
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MPADIMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMNYPSQHQHQHQLPSTAGPAHPSFGQSV
VQIPNSSPQVLPMNAVSCKGGSSPASLPSDATKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANNAGTPVPVPAAVSPGAPSGNTDSVWRPW
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatattatggaaaagacctcgtcctccccggtcgctgcaaccccggcaagc
atgaacacaacccccgataaacccaagacagcctcggagcacagaaagtcatccaagcct
attatggaaaaaaggagaagagccagaatcaacgagagtctgggtcagctcaagacactc
atcctggatgcgctgaaaaaagatagctccagacactccaaactagagaaggcagacatc
ctggagatgacggtgaagcatctgcggaaccttcagagagctcagatgaccgctgctctg
aacacagatcccacagtcttgggaaaatatcgtgccggtttcagcgagtgcatgaacgaa
gtcacacggttcttatccacctgcgaaggtgtcaacactgaggtcaggacgcggttgctc
ggtcacctggctaactgcatgacccagatcaacgccatgaactatcccagtcagcatcag
caccagcaccagctgccctccaccgcggggcccgcacacccgtccttcggccagtcagtg
gttcagatccccaactcgtccccgcaggtcctgccaatgaacgcggtctcctgtaaagga
ggctcgtcgcctgcgagtttaccctcagacgctaccaaagtgtacggtggcttccagatt
gtgcctgcaacggacggacagttcgctttcctcatacccaatgcggcgttcgcgccaaat
ggccccgtaatccccgtatacgccaacaacgccggcacgccggtgccagtgccggctgcg
gtgtctcccggagccccgtcaggcaacacagactcagtgtggagaccgtggtga
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