Solea solea (common sole): 131465145
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Entry
131465145 CDS
T10853
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03030
DNA replication
ssoe03410
Base excision repair
ssoe03420
Nucleotide excision repair
ssoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131465145 (rfc4)
03410 Base excision repair
131465145 (rfc4)
03420 Nucleotide excision repair
131465145 (rfc4)
03430 Mismatch repair
131465145 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoe03032
]
131465145 (rfc4)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131465145 (rfc4)
03400 DNA repair and recombination proteins [BR:
ssoe03400
]
131465145 (rfc4)
DNA replication proteins [BR:
ssoe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131465145 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
131465145 (rfc4)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
131465145 (rfc4)
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131465145 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
131465145 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
AAA_lid_RFC1
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
DUF815
Gp44_lid
Mg_chelatase
ResIII
AAA_28
AAA_19
SLFN-g3_helicase
RuvB_N
Cdc6_lid
AAA_24
AAA_14
AAA_5
AAA_7
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
131465145
NCBI-ProteinID:
XP_058493503
LinkDB
All DBs
Position
9:complement(24231368..24236589)
Genome browser
AA seq
360 aa
AA seq
DB search
MQAFLKGATVQSVRPQKDKTTAGSSAEKKIKALPWVEKYRPKCVDDVAYQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRHRVLELNASDERGIQVVREKVKN
FAQLTVAGRRSDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLAICDKEKLKFTKESVAALVKVSDGDLRKAITFL
QSAARLSADKQITEQTVIEIAGVVPPKMIDNLLQICFKGTFEKLEVTVRDMVDEGYAATQ
ILSQLHEAIIEQELSDRQKSAITEKMAVVGKCLTDGADENLQLLSLCSVIMQQSTQTHNN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggagcgacagttcagtctgttcgaccacagaaagacaaaaca
acagcaggaagcagcgctgagaagaaaatcaaggctcttccctgggtggagaagtacaga
cccaagtgtgtggacgacgtggcgtatcaggaggaggtggtggccgtgctgaagaaatct
ctggaaggagcagatctacccaacttgctcttctatggtcctcctggaacaggaaagacc
tcgaccatcttagctgctgccagagaactttacggtccagagttgtatagacacagagtc
ctggagctcaatgcctctgatgaacgagggattcaggtggtcagagagaaggtcaagaac
tttgctcaactcactgtggcaggaagacgatcagatgggaaaccttgtcctccgtttaag
atcatcatcctggacgaggcggactccatgacggcgccggctcaggctgctctcagaaga
accatggagaaagaatcacgcaccacacgcttctgtctcatctgtaactacatcagcagg
atcattgaacctttgacctccagatgctccaagtttcgcttcaaacctttagccaatcag
atccaagaggagcgtctgctcgccatctgtgacaaagagaagctcaagttcaccaaagag
agtgtggcggcgttggtgaaagtatcagacggagatctgaggaaagccatcaccttctta
cagagcgctgctcgactcagtgctgacaaacagatcacagagcagactgtcatagaaatt
gccggggtcgtccctccaaagatgatcgacaacctgctgcagatttgcttcaaaggaacg
tttgagaaactggaggtgaccgtgagggacatggtggacgaaggctacgccgccacacag
atcctgagtcagctgcacgaagccatcatcgagcaggagctgagcgacagacagaagtcg
gccatcacggagaagatggcggttgtaggaaagtgtttgacggacggagctgacgagaat
ctgcagctgctgagtctctgctcggtcatcatgcaacagtcgacacagacgcacaacaac
tga
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