Solea solea (common sole): 131465299
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Entry
131465299 CDS
T10853
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131465299 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssoe04515
]
131465299 (vcam1b)
04090 CD molecules [BR:
ssoe04090
]
131465299 (vcam1b)
04091 Lectins [BR:
ssoe04091
]
131465299 (vcam1b)
Cell adhesion molecules [BR:
ssoe04515
]
Immunoglobulin superfamily
VCAM
131465299 (vcam1b)
CD molecules [BR:
ssoe04090
]
Proteins
131465299 (vcam1b)
Lectins [BR:
ssoe04091
]
I-type lectins (Siglecs)
131465299 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Ig_C17orf99
ICAM1_3_5_D2
DUF7712
Rv3627c_N
Motif
Other DBs
NCBI-GeneID:
131465299
NCBI-ProteinID:
XP_058493812
LinkDB
All DBs
Position
9:25612688..25618909
Genome browser
AA seq
820 aa
AA seq
DB search
MSPFMCSSSSFITAVLLMSSSCVQSLRVDVFPRMPLFALGEHHQLICSLHDCPTMPSFSW
SLLEDRPLTASISTNGTRSVMTFDPVLPEHEGALLCRTVCGTEKKQIITNVRLFSFPSAP
VIRGPNQLRLGVESTLTCQLSDVYPAELLNLTWSTGDRILQSTLGEPGSSSVQSELKFTP
QNQDSVLRINCRATLDLLELPEETRSRESSASFRIVYAPVVKWISESTLVMAGSPLTLSC
LTEGNPEPSVHWTVRTAEGGTLPGRRGQQLVFTPVSLSNTGTYECEARNSEGHVSAAVNV
TVHAPPTNTSITVSAGEDVVEGQQLDFTCHSEGAPPTTLVLRREGVELHRTNPTSSTLSF
RLSSALVEDSAHYQCEATNQYGSQLVSRSVRVKVHPLQVQVSPHVSHAEVGAVLVLTCRA
SGCLRPLTLTWRRTQQEDGTVLQRTQQEDGLSLLQLKDLDLQDQGGYSCEAECDSVFRTR
TTWVQVYSFVSDPTVKNPGPVLLGQEAVLQCDVISVFSNNQLRIQWLMENITLSSQSFSL
SESLHNVSSVLQYHVQVDRPVLTCRAELLTQDGDVLKFRTTSVPLHVHYAPRRTSIMVSP
GEDVVEGQQVDITCHSDGAPPTTLVLKREGVELHRTDPASSMLSFSLSYALLEDSAHYQC
EASNQYGSQLVSTSISVKAPPRNTTVLVLPSTVVQEGQNVTVCCWTISSPPSTMILKKLT
NGTEMFSFNGTFLLVNVSTRDSGLYQVNVTNALGHQVQVFRINVITERSSAPLPASLSVV
VIVSVCVVVVVASSALLLDHLRRSRKTGFYQLPQSPPPTA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctttcatgtgcagcagcagcagcttcatcacagctgtgttgctgatgtcgtcg
tcgtgtgttcagagtctccgcgtcgacgtatttcccagaatgcctctgttcgcactgggc
gagcatcatcagctgatctgttctcttcacgactgtcccacgatgccgagcttctcatgg
tcgctgctggaggaccgccccctgaccgcctccatcagcaccaacgggactcggtcggtg
atgacctttgacccggtgctgccagagcatgagggggcgctgttgtgcaggacggtttgt
ggaacagagaagaagcagatcatcaccaatgtccggcttttctctttcccatcagccccg
gtgatcagggggccgaaccagctgaggctgggggtggagtcaacattgacctgccaattg
tctgatgtttacccagcggagctgctaaacctcacctggtctaccggggacagaatcctg
cagagtacgcttggagaacctggatccagttcagtccagtctgagctcaagttcactcct
cagaaccaggactctgtattgaggatcaactgcagggccaccctggatctgctagaactg
ccagaggagaccaggagcagagagagcagcgcctcctttaggatcgtatatgctccagtt
gtgaagtggatctcagagtctacattggtgatggcgggttcgcccctcacgctctcatgt
ttgacggagggaaacccagaaccgagtgtccactggaccgtcaggacagcggagggcggg
actcttcctggacgtagaggacaacagctggtcttcaccccggtcagtctgtccaacacc
ggaacctacgagtgtgaggccagaaacagtgagggacacgtgagcgccgctgtcaacgtg
accgttcacgctccacccaccaacacatcaatcacagtgagtgcaggtgaggatgtggtg
gaaggtcagcagctggacttcacctgccactcagagggagctccgcccaccacactggtg
ctgaggagagaaggggtggagcttcatagaactaaccccacctcttccacactctccttc
cgactttcatctgcacttgtagaagactccgcccactaccagtgtgaagccacgaaccag
tacggttctcagctggtgtccagatccgtcagggtcaaagtccaccctttgcaggtgcag
gtgagtccacatgtctcacacgcagaggttggtgcagttctggtcctgacctgcagagcc
tctggatgtctacgccccctcaccctcacctggaggaggacgcagcaggaggacgggact
gtcctccagaggacgcagcaggaggacggactgtctctactccagctgaaggacctggac
ctccaggatcaggggggttacagctgtgaggctgagtgtgactccgtcttcaggaccaga
accacctgggtccaggtctactcgtttgtttctgacccgactgtgaagaaccccggtcct
gtcctgctgggtcaggaggcggtccttcagtgtgatgtcatcagtgtgttttcaaacaat
cagctcaggatccagtggctgatggagaacatcacactgtcgtcacagtccttcagctta
tctgagtctctgcacaacgtctcgtctgtcctacagtaccacgtccaagtggaccgaccc
gttctgacctgcagggcggagctactgacgcaggacggagacgtgttgaagttcaggacc
accagtgtccctctacatgtccactatgctccgaggagaacgtccatcatggtgagtcca
ggtgaggacgtggtggagggtcagcaggtggacatcacctgccactctgacggagctccg
cccaccacattggtgttaaagagggaaggggtagagcttcacaggactgaccccgcctcc
tcaatgctctccttcagtctctcatatgccctgctggaagactccgcccactaccaatgt
gaagcctccaaccaatatggatcccagctggtgtccacctccatcagtgtcaaagctcct
cccagaaacaccacagtgctggttctgccgtccactgtggtccaggagggtcagaacgtc
accgtgtgctgttggaccatcagttctccaccatccaccatgattctgaagaaactgacc
aacggaaccgagatgttctccttcaacggaaccttcttactggtcaacgtcagcaccaga
gactctggtctgtaccaggtcaacgtaaccaatgcgctgggacaccaggtccaagtgttc
aggatcaatgtcatcacagagagaagctccgcccctcttcctgcgagcctcagcgtggtc
gtcatcgttagtgtctgtgttgtggtggttgtagcatcatctgctctgctgctggaccac
ctgagaagatccaggaagacagggttctatcagctgcctcagtctcctccacccactgcc
tga
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