Solea solea (common sole): 131465545
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Entry
131465545 CDS
T10853
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03320
PPAR signaling pathway
ssoe04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
131465545 (rxrgb)
03320 PPAR signaling pathway
131465545 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131465545 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssoe03310
]
131465545 (rxrgb)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
131465545 (rxrgb)
Nuclear receptors [BR:
ssoe03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
131465545 (rxrgb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
131465545
NCBI-ProteinID:
XP_058494311
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Position
9:complement(8861092..8889891)
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AA seq
465 aa
AA seq
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MWHPVSSPATGGSSAREISYSHYSTGPMSAAHTHPPPMGGMVGHPSVISTSRHLPSPMST
MGSQMNGLASPYPVITSSLGSPSVSLPSTPNMNFGPLGSPQMNSMNSVSSSEDIKPPPGL
QNMGNINYQSTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDS
KECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGRERGENEVESTSSFNEDMPVDK
ILDAELAVEPKTETYSEGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQ
VILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccctgtatcatcacctgcaactggaggaagctctgcgagggagataagttac
agtcactactcaacagggccaatgagcgcggcccacacccacccgcctcccatgggcggc
atggtgggacacccgtcggtcatcagcacttccaggcacctgccgtcccccatgtccacc
atgggctcacagatgaacggcctggcctcaccttaccctgttattacatcatctttgggt
tcaccctctgtatcactgccatccacgcccaacatgaactttggaccactcggcagtcca
cagatgaactctatgaacagtgttagcagctcggaggacatcaagcctccaccaggtcta
cagaacatgggaaacatcaactaccagagtacaagccccgggggaatgtcaaagcacatc
tgcgccatttgtggggaccgctcctcaggaaagcactatggtgtgtacagctgtgaggga
tgcaagggctttttcaaaaggactgtccggaaagatctcacttacacgtgtcgagacagc
aaggaatgcctcatcgacaaacgccagcggaatcgctgtcagtactgccgctaccagaag
tgcctggccatgggcatgaagagagaagcggtgcaggaagagaggcagcgtggcagggag
cgaggggagaatgaggtggaatctaccagcagtttcaacgaggacatgcctgtggacaag
atcctggatgctgaactcgccgtggagcccaaaacagagacatacagcgaaggcagcccg
ggaaactcgaccaacgacccggtcaccaatatctgccaagcagcagacaagcagctcttc
actttggtggagtgggcgaaaaggatcccgcacttctccgaactccccctcgacgatcag
gttattctactacgagcaggctggaacgagctgctcattgcctcattctcgcatcgctca
gtcactgttaaagatggcatcctattggcaacaggcctacatgtccacagaagcagcgcc
cacagtgctggagtaggctccatctttgatagggtcctaacagagttggtatccaaaatg
aaagacatgcagatggacaagacagagctcggttgccttcgagccatcgtcctcttcaac
ccagacgcaaaaggtctttcaaacccaccagaggtcgagggactgagggaaaaagtctat
gcttcacttgagtcgtatacaaaacagaaatacccagaccagcctggcaggtttgctaaa
ctgctgctccgcctgccggccctgcgctccatcggcctcaagtgcctggagcatctgttc
ttcttcaagctgatcggggacacgcccatcgacaccttccttatggagatgctggaggcc
cctcatcagatcacatga
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