Solea solea (common sole): 131466388
Help
Entry
131466388 CDS
T10853
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131466388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131466388
03009 Ribosome biogenesis [BR:
ssoe03009
]
131466388
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131466388
Spliceosome [BR:
ssoe03041
]
Complex A
U2 snRNP components
U2 related factors
131466388
Complex B
131466388
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
131466388
Ribosome biogenesis [BR:
ssoe03009
]
Eukaryotic type
90S particles
Helicases
131466388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_25
Cas3-like_C_2
SRP54
Flavi_DEAD
AAA_29
nSTAND3
nSTAND_NTPase5
AAA_7
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
131466388
NCBI-ProteinID:
XP_058495558
LinkDB
All DBs
Position
10:complement(5318615..5325991)
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDHSTSKKRSDGRDRDRDRDREDRSRDRDRDRDRDRDRDRDRDLKPSSVP
SNSMAAAVGIQPLKQMAVHQQINPFTNLPHTPRFYEILKKRLQLPVWEYKESFSDIITRH
QSFVLVGETGSGKTTQIPQWCVDMVRGLPGPKRAVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRADLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDCLLFLTGQEEIDEACKRIKREVDDLGPDVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRAL
CTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYEMGNFPQCEAKRQLERIVAKLDTKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacatcgcttggatttaggcgacgatcactccaccagtaagaagaggtct
gatggaagagaccgagatcgtgacagagaccgcgaggaccgctccagggacagggatcga
gatagggatcgtgacagggacagagaccgggacagagacctgaagccttctagcgtgccc
tctaacagcatggcagctgcagtgggcatacaacccctcaaacagatggcggtgcaccag
cagattaatccgtttaccaatttaccgcacacaccacgtttttatgagatcctgaaaaag
aggttacagcttcctgtgtgggagtacaaggagagcttcagcgacatcattacacgtcac
cagagctttgtccttgtcggagaaactggctctggaaaaacgacacagatccctcagtgg
tgcgtggacatggtgagaggtttgcctggtcctaaacgagcagtggcctgtactcagccc
agaagagtggcagccatgagtgtggctcaaagagtggcagacgaaatggacgtgatgctc
ggacaggaagtcggttactctatccgatttgaggactgtagctctgccaagactatattg
aagtacatgacagatggtatgttattaagagaggctatgaatgacccactgctggagcga
tatggtgtgatcattttggatgaggcccacgagcgaactttggccacagatatcctgatg
ggagttctcaaggaggtggtgcgtcaaagagcggatctgaaggtgattgtcatgagtgcc
acgctagatgctggaaagttccaggtttacttcgacaactgtcccctgctgactattcct
gggcgtacgcaccctgtggagatcttctacacccctgaaccagagcgagattaccttgag
gcagcaatccgtactgtcattcagattcatatgtgtgaggaagaggagggtgactgcctc
ctcttcctcaccggtcaagaggaaattgacgaggcctgcaagcgaatcaagcgtgaggtt
gatgaccttggacctgacgttggagacattaaaatcattccactgtattccacgctgcca
ccacagcagcagcaaaggatcttcgagccgcctcccccgaggaagcccaatggtgcaata
ggaagaaaggtcgtcgtgtcaacaaacattgctgaaacctctctaacaattgatggtgtg
gtgttcgtcattgatcctggatttgctaaacagaaggtctacaatcctcgtatccgagtt
gagtctttgcttgtcaccgccatcagtaaagcttctgcccagcagagggcgggacgagct
ggcagaacacgtccaggaaaatgtttccgcctctacacagagaaggcctacaaaacagag
atgcaggataacacatatccagagattcttcgatccaacctgggatctgttgtgctgcag
ctgaaaaagcttggtattgacgacctggtgcattttgatttcatggatcccccagctcct
gaaacattaatgagggccctggaactgctgaattacctcgctgctctcaatgatgatggt
gacctgacggagctaggctccatgatggcggagtttcccctggacccccagctggctaag
atggtcattgccagctgcgagtttaactgctctaatgagatcctttccattactgccatg
ttgtcagtcccacagtgttttgtccgccccacggaggctaagaaggcagctgacgagtcc
aagatgaggtttgctcacattgacggagaccacttgacgctgctcaacgtctaccatgcc
ttcaaacaaaaccatgaatctaaccagtggtgctatgacaactttgtcaactaccgttca
ctgatgtctgctgacaacgtgcggcaacagctgtcgaggatcatggaccgattcagcctg
ccccgtcggagcacagagttcaccagcagagattactacatcaacatccgccgggcgctc
tgcaccggcttcttcatgcaggtggctcatctggagcgcacaggtcattacctcacggtg
aaagacaaccaagtggtccagctgcacccgtctactgtgctggaccacaagcctgaatgg
gtgctctacaacgagtttgtcctcaccaccaagaactacatccgcacttgcacagacatc
aagccagagtggctggtgaagatcgctccccagtactatgaaatgggtaacttcccacaa
tgtgaagctaaaagacagctggagcgaatcgttgccaaattggatactaaggaatattct
cagtactga
DBGET
integrated database retrieval system
