Solea solea (common sole): 131466400
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Entry
131466400 CDS
T10853
Symbol
pdcd11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
ssoe Solea solea (common sole)
Brite
Ribosome biogenesis [BR:
ssoe03009
]
Eukaryotic type
90S particles
Other 90S particles
131466400 (pdcd11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131466400
NCBI-ProteinID:
XP_058495573
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Position
10:22717226..22733617
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AA seq
1815 aa
AA seq
DB search
MASLEEDFPRGGSAKKPTKSTIVVQRPEVDNLFQSNEQAETKKRRATIKDDAKNVKKQKT
GKEKDGLTLNTAAKCVEILHAKNVKEGMLMLGCVKEVTDFEVTVSLPCGLQGFLSIKNVS
DSYTKLLSEQLDSTDTEEICSLPHLFYPGMVLRCIVAKLDTAKSGSTSIQLSASPKLVNK
ALNSSSLKAGMILSGCVESVEDHGCIIDIGISGSKAFLSAKAVKDQRNNLDELKVGQYLT
CKVEEVKNEGRVVRLSAGPSTFAQACAESEQGWNLTNLLPGLLVKATIKKVTKHGLIVDF
LSSFTGQVDFLHMEPEQADKYTEGKEVRACVLYLEPSMHLVGLSLRSYLVQPEQRVEPVS
AGGERIGEVVKDCKMTVVHHMSGALLELPDQTLAFVHRNHLKESNEKPNENRVLAKPEHT
CRILDFSVIDQIHFASLRKSVIARPFFRYHDLQPGQVVEGKVSVLLERGMMVHISDHIKG
LVPKNHLSDIILKNPEKKYSEGMKVKCRVLSIDVESRKLYLTRKKALVESSLPLFLTYAD
ARPGRMSHGFIVCIKDFGCIVRFYNNVKGLVPISELGTEAISNPEEIFYVGQVLKTKVLK
CDLEKEKILLSFKAAVEGNTEAAVEPQVDCEVGKPLEAKVLKKSIVGLEVAILPDEIQAV
LPTMHLSDHVSNCLLLWESLQEGDVISNVMCFNKNKRHISLTKKPTVRWSLEEGAVAKDF
SEITVGMQLIGWVKNIMSYGVFVEFPYGLVGLAPKSAMTDKFISDTTVAFQLGQTVIAKV
TNLDEEKRRFLVTLKISEVITPEADAQTRLINGLQERRAVGDMLAMRGNSELRQQLAALT
VGQKLKMTVDTVDGNGATFKSDDLGDATILASKYHVMGVNLTAGQKVTAVVLYVDILSNT
VHVSVLTKLLMKKKSLSEGSKHTVMLQHIDKEFAVISLDDTAQLTVIQTSSHLNEVFLSE
SEKLKGGMILEAEVIEPSFQELQGLPLVSWKRTAPKRLRTTSENQMSSRGHCFGEILQGT
VKTVKPTCIQVTLEDGTTGSVHVSEVMEVDKVSLGSFPTSSVKVGSSVTVRVIGGREASS
QRFLPFSHPKFTYTIPELTLTPSKLDKSVDFKQVTVKDKLSSYKVGDEITCFVSKFNPER
KSLEVTINPGVTGTVDLLAMITDPKNGSHPEKLYKLGQAVRATVVEISSKHRPFVLSLTG
GHKLEEGTVTLGIVTNVQPQVGLLVKLPLGGMGTVAVTELADAYRPNPLAGYSKDQLLRC
FLLESENDKWQLSLRPSRLYPQQDKPAKDPEVLSFDKLKEGEIIRGYVKSVGEQGVFIRL
SRHIIGRAQLQQSTQYFVNSHKVLSTHLPPNTLLTTKILSIDKEEEYVNLSLLPVDTGKP
DVLPESLSLPLRLVGEEKKKHDTKKKKKRTLSESEQKQAESQVPKKKKKAKKSKTDDSDS
GVEVYFREEEDKEEEEPKPEPPKQVTSSSAAPSRLQVAAGFSWDVGLNSLKPASAARDAD
SSDGEEQEESSKPQKKSRHALEQEKMAAEKALVRQETELMDPSLRPEDAAAFERLLLASP
NSSLLWLQYMAHHLQATQIEQARAVAERALKTISFREEQEKLNVWVALLNLENMYGTEES
LKKVFERALQFCEPMPVYQQLADIYAKSSKIKEAEGLYKTMVKRFRQNKEVWLSYGSFLL
QQGQSDAASSLLQRALKSLSTKESVDVIAKFAQLEFRYGDAEKGITMMDKVLTSYPKRTD
LWSVFIDLTIKHGSQKDIRALFDRVIHLSVSVKKIKFFFKRYLEYEKKHGTPQSIQAVKE
KAMEFVEAKGTEAAN
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atggcatcattggaggaggatttccctcgaggagggtcagcaaagaagcccacgaaaagt
acaatagtggtgcagcgacctgaagtggacaatctgttccagtcaaatgaacaagcagaa
acaaagaaaagaagggcaacgatcaaagacgatgccaagaatgtcaagaagcagaaaacg
ggcaaagaaaaagacggcctcactctcaacacagcagccaagtgtgtggaaatcctgcat
gctaagaatgtgaaggagggtatgctgatgctgggctgtgtgaaggaggtcacagacttt
gaggtgaccgtcagtctgccgtgtggtctgcaaggcttcctgagcatcaagaacgtcagc
gactcttacaccaagctgctcagtgaacagctggattccactgacacagaggagatctgc
tccctccctcacctattctaccctggcatggtgttaagatgtatagttgccaaattggac
acggctaaaagcgggtctaccagcatccagctgtcggccagtccgaaattggtcaacaag
gctctcaattcaagctctctgaaagctggcatgatcctgagcggatgtgtggagagtgtg
gaggatcacggctgcatcattgacattggcatcagtgggtccaaagccttcctgtctgca
aaagctgtaaaagaccaacgcaacaacctggacgagctgaaagtgggtcagtatttgact
tgtaaagtggaagaggtcaagaatgaaggacgagtggtccgactttctgccggtccctcg
accttcgcccaagcctgtgctgagtccgagcagggctggaacctcaccaacctgctgcct
ggtcttctggtcaaagctaccatcaaaaaggtgacgaaacatggtctgatcgtggacttc
ctgtcctccttcaccggccaggtggactttctccatatggagccagagcaggcagacaag
tacacagagggaaaggaggtgcgagcctgtgtgctgtacctggagccctccatgcacctg
gtgggtttgagtctgcgcagctacctcgttcagcctgagcaaagagttgagcctgtctct
gctggcggtgaacgcattggtgaggtggtgaaagactgtaaaatgacggttgttcaccac
atgtccggagcgttgctggaactgccggaccaaacgttggcatttgtacacaggaaccac
ctgaaggagtcaaacgaaaaaccaaatgagaacagagtgttggcaaagcctgagcacacc
tgcaggatcctggacttcagtgtcattgaccaaatccactttgcaagtctgcgcaagagt
gtgattgcgaggcctttttttagatatcatgatcttcagcctggtcaggttgtagagggt
aaagtgtcagtcctgctggagcgtgggatgatggtgcatatttctgaccacattaaaggc
ctggtgcctaagaaccacctgtctgacattatcctcaaaaacccagagaaaaagtactcg
gagggcatgaaggtcaaatgtcgggtgctgtcaatagatgtggagagtaggaagctgtat
ctaaccaggaagaaggccctggttgaaagctccctgccgctgttcctcacctatgccgac
gctcgtccgggccgcatgtcccacggttttatcgtctgcatcaaagactttggctgcatc
gttcgtttctacaacaacgtcaagggcctggtgccgatcagtgaactcggcaccgaggcc
atcagtaatcctgaggagatcttctatgttggacaggtgttaaagactaaagttctaaag
tgtgacctggagaaggaaaagatactgctgtcattcaaagctgcagtggagggaaacacc
gaggcagccgtcgagccccaggtcgactgtgaggtgggaaaacctctggaggccaaggtg
ctgaaaaagtcaatcgttggattggaggtcgctatcctccctgacgagatacaagcagtt
ttacccaccatgcacctctctgatcatgtgtccaactgcctgctgctgtgggagagcctg
caggagggagacgtcatctcaaacgtcatgtgtttcaacaagaacaagcgacacatctcc
ctcactaagaagccaacagtgaggtggtccctggaggagggagcggttgccaaggatttc
tcagagatcacagttgggatgcagctgatcggctgggtcaagaacatcatgtcctatggc
gtatttgttgagttcccgtacggcctcgttggtttagcacccaagtcggccatgactgac
aagttcatcagtgacacgacagttgccttccaactgggccagactgtcattgctaaggta
acgaacctcgatgaggaaaagcgccgcttcctggtcacgttgaagatttcagaggtcatc
actccagaggcggacgcccagaccagacttattaatggtctgcaggagagaagagctgtg
ggtgacatgttggcaatgagaggtaacagtgagcttcgccagcagctggctgctctcact
gttggtcagaagctgaagatgaccgtagacactgtggacggcaacggggcaacatttaaa
tctgacgatttgggcgatgctaccatactggccagcaagtaccatgtcatgggcgttaac
ttgactgcaggacagaaagtcaccgcagtcgtcctttacgttgacatcctgtccaacacc
gtccatgtgtctgttctgacgaaactgttgatgaagaagaaatctttaagcgaaggatct
aaacacaccgtgatgttgcagcacatagacaaagagtttgctgtcatctcactggatgac
accgcacagctcactgtgatccaaaccagcagccacctgaacgaggtgttcctctccgag
tcagagaagctgaaggggggcatgattttggaggctgaggtcatagaacccagctttcag
gagctgcaagggctccctctggtgtcatggaaacgcactgcacccaaacgactgcgcacg
acctccgaaaaccagatgagctcccgaggtcactgctttggcgaaatcctgcaggggaca
gtgaagacggtaaagcccacctgcattcaggtgacactagaggacggaaccacgggcagt
gtgcatgtgtcggaggtgatggaggtcgacaaagtgtctctgggttctttcccgacgtcc
tcggtgaaagtgggcagtagcgtcaccgtcagggtcattggaggacgagaagcctcaagt
caaagattcttgccattttctcatcccaaattcacatacaccattcctgagctcacactt
acaccaagcaaactcgataaaagtgtggatttcaaacaagttacagtgaaagacaaactc
agcagctataaggtcggggacgaaattacatgctttgtatcaaagtttaatccagagagg
aagtctttggaggtcacgattaaccctggtgtcaccggcacggttgatcttctagccatg
atcactgacccaaaaaatggcagtcatccagagaaactatacaagctgggccaagcagtc
cgtgccacagtggttgaaattagctccaaacatcgtccctttgtgctgtcactcacaggt
ggccataaactggaggaaggcaccgtgactttgggcatcgtgactaatgttcagccacag
gttggtctcctggtcaagcttcccttgggaggcatgggcactgttgccgtcactgaactg
gccgatgcctacaggccaaaccctctcgccgggtacagcaaggatcagcttctcaggtgt
ttcctcctggagagcgaaaacgacaagtggcagttgtctttacgcccatcaagactgtac
ccacagcaggacaagcccgcaaaagaccccgaggtcttatcttttgacaaactgaaggag
ggcgagatcatcagaggctacgtcaagtctgtgggagagcagggcgtcttcatcaggttg
tctcgacatatcatcggcagagcgcagcttcaacagtccacacagtactttgttaacagt
cacaaagtcctttctacacacctgcctcccaacactctgctcaccacgaagatcctcagt
attgacaaagaggaggagtacgtcaacctctcgcttctccccgtggacactgggaagcca
gacgtcctcccagagtctctcagtctgccgctgcgtctggtcggagaggagaagaagaaa
cacgacactaagaagaagaagaaacgcacactgtctgagagcgaacagaaacaagccgag
tcccaagttcccaagaaaaagaagaaagcaaagaaatccaagaccgacgatagcgacagt
ggagttgaggtgtacttcagagaagaggaggataaggaagaggaagaacccaaacctgag
cctccaaagcaggtgacgagcagctcagcagctccatccagactacaggtggcagcaggt
ttctcgtgggatgtgggtctaaactcccttaaacctgcctctgcagctcgagatgcagac
tccagtgatggagaggaacaggaagaaagcagtaagccccagaagaagtcccgtcatgcg
ctggagcaggagaaaatggcggcagagaaggcgctggtgcgacaggaaacggagctcatg
gatccaagcctgaggccggaagacgccgccgcctttgagcgcctgcttctcgcctccccc
aacagctctctgctttggctccagtacatggctcaccatcttcaggccacgcagatcgaa
caggcccgagctgtggctgagagggctctcaaaaccatctccttcagggaggagcaggag
aagctgaatgtgtgggtggccctgctgaacctggagaacatgtacggcaccgaggagtct
ctgaagaaagtgtttgagcgggcgctgcagttctgtgagccaatgcccgtctaccagcag
ctggccgacatctatgccaagtccagcaagatcaaggaggcggagggcttgtacaagacg
atggtgaagcggttccgtcagaataaagaggtgtggctgagctacggatccttcctgctc
cagcagggtcagagcgacgctgccagttccctcctgcagagggcactgaagagtctgtct
accaaagaaagtgtggatgtgatcgctaagtttgctcagctcgagttccgttacggtgat
gcggagaaaggtatcaccatgatggacaaagtcctgacaagttatcccaaacgcacggat
ctctggtccgtcttcattgacctcacgatcaaacacggatcacagaaggacatcagggcg
ctctttgatcgtgtgatccacctgagtgtttccgtgaaaaagatcaagttctttttcaag
cgctacctggagtacgaaaagaagcacggcaccccgcagagcatccaggcggtcaaagag
aaggccatggagtttgtggaggctaaaggcaccgaggccgcaaactaa
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