Solea solea (common sole): 131466638
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Entry
131466638 CDS
T10853
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
131466638 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssoe04121
]
131466638 (trim25)
Enzymes [BR:
ssoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131466638 (trim25)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
131466638 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-B_box
ANCHR-like_BBOX
Wx5_PLAF3D7
Motif
Other DBs
NCBI-GeneID:
131466638
NCBI-ProteinID:
XP_058496013
LinkDB
All DBs
Position
10:1216789..1227852
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AA seq
651 aa
AA seq
DB search
MAADAPQLSLMSLEDELTCSICLSPFSCPVTIPCGHNFCRDCLLASWEDVYCCPQCRCHF
PTKPELKKNTVLSTVVETFTLRSSKSEAEEEKEAEEEEEEEVETVVRCDTCMMTEASHTC
LTCMASFCEEHLRPHRENPVFRLHQLSQPLSDLSHRICSEHHKLMELFCIGHVRPICSLC
LQQVHKGCSFTTPEEQRMLKESDLKNKLDLLDGRIVKNQSIVCQMSSMQDKLKDDAATKK
EAVVAEYQLLRDMLIQDENAALSAVDREMDSGQIKLGVLTKKFTENINHMSAAQDQINGL
LAQSYTLKFLQTSYTLPSAVNFDPYTPRVNLDSKKVLAIQDFCAAFKEHLTEVLQQPVEA
RVQLLKSGKKTASGFPPVSFGAFQTSEPGPETKAGTKKKNQSKRKSDSALKEAKPNEAAE
QLKKLAASMENLWEDPVKTKAKGRPAAPQPSQKPETSKITPNITCHEKRSVLLNFGRALN
FDRKTAHKRISLTEEFTKASVLEELENYPNCPQRFNVCSQVLTSQGFSRGCHYWEVRLSC
NNFIGLGLAHKAIDRVGPNSRLGRNAQSWCVEWFNVKLSAWHNSVETVLVNPSPKRVGVL
LDCDAGRATFYNVADRAYPFHTFVLPVSEAVFPAFWMFSSGSSISLCKLLA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgcgcctcagctgagtctcatgagtctcgaggacgagctcacctgcagc
atctgtctgtcccccttcagctgtcccgtcaccatcccctgtggacacaacttctgccgc
gactgtctcctcgcctcctgggaggacgtgtactgctgtcctcagtgtcgctgtcacttc
cccaccaagcctgagctgaagaagaacaccgtcctcagcaccgtggtggagaccttcacg
ctcaggtccagcaagagtgaggcggaggaggagaaggaggctgaggaggaggaggaggag
gaggtggagaccgtcgtccgctgtgacacctgcatgatgacggaggcgagtcacacctgt
ctcacgtgcatggcctctttctgtgaggagcacctgcgtcctcaccgggagaacccggtg
ttccgtctccaccagctgagccagcccctcagtgacctgtctcaccgcatctgctcagag
catcacaagctgatggagctcttctgcatcggccatgtgcggcccatctgcagcctctgc
ctgcagcaggtgcacaagggctgctccttcacgactcctgaggagcagaggatgctcaaa
gagtctgacctgaagaataagctggatttgctggatgggaggattgttaaaaatcaatct
attgtatgtcaaatgagcagcatgcaggataaactgaaggacgacgcggccacaaagaag
gaagcggtggtggccgagtatcagctgttgcgcgacatgttgatccaagacgagaacgcc
gcgctgagcgccgtggatcgagagatggacagcggtcagatcaaactcggggttctcacc
aagaagttcacggagaacattaatcacatgagcgccgctcaagaccagatcaacggtctg
ctcgctcagtcctacacgctcaagttcctgcagacttcgtataccctgccgtccgccgtc
aactttgacccttacacccctcgagtcaacctggactccaagaaggtgctggcaatccag
gacttttgtgctgcttttaaggagcatctgactgaggtgttgcaacagcctgtggaggcc
agagtgcagctgcttaagtcaggtaaaaaaacagcctcgggatttcctcctgtcagtttt
ggagccttccagacatcagagccaggtccagagaccaaggccggcacgaagaagaagaac
cagagtaagagaaagtctgattctgctttaaaagaagcaaaacctaacgaagctgctgaa
caattgaaaaaactagccgcttcaatggaaaacctgtgggaggatcctgtaaaaaccaaa
gccaaggggcgtcctgctgcaccgcaacccagccagaaaccagaaacttcaaaaattact
ccaaacatcacgtgtcacgagaaaagaagtgtacttctgaattttggcagagctttaaat
tttgaccgaaagacggcccacaagcgcatctcgctgacggaggagtttacgaaggcgtcc
gtgttggaggagctcgagaactaccccaactgccctcagcgcttcaacgtgtgctcgcag
gtgctcacctcgcagggcttctcccgagggtgccactactgggaagtgcgcctgagctgc
aacaacttcatcggcctcggtttggcgcacaaagccatcgaccgcgtcggtcccaacagt
cgcttgggccgcaacgcgcagtcctggtgcgtggagtggtttaacgtgaagctgtcggcg
tggcacaacagcgtggagaccgttctggtcaatcccagtccgaagcgcgtcggcgtgctg
ctggactgcgacgcgggcagagctacgttctataacgtggcagatcgagcgtatcccttc
cacacctttgtgctgcccgtgtctgaagcagtgtttccagctttctggatgttctccagc
ggttcgtccatctctctgtgtaagcttctggcgtga
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