Solea solea (common sole): 131466908
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Entry
131466908 CDS
T10853
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131466908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131466908
03009 Ribosome biogenesis [BR:
ssoe03009
]
131466908
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131466908
Spliceosome [BR:
ssoe03041
]
Complex A
U1 snRNP components
U1 related factors
131466908
Complex B
131466908
Ribosome biogenesis [BR:
ssoe03009
]
Eukaryotic type
Pre-60S particles
Helicases
131466908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
131466908
NCBI-ProteinID:
XP_058496479
LinkDB
All DBs
Position
10:16320321..16328399
Genome browser
AA seq
637 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGGGSRGGPPAGKFGNPGERLRKKHWNLDELPKF
QKNFYQEHPDVTHRPVQEVEQYRRNKEVTVKGRDCPKPMVKFHEASFPSYVMDVIGKQNW
TEPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLA
PTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC
GKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFL
KDYVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRC
DELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVI
NYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQM
AEDRGGRGRGGRGGYKDDRRDRYSGGGRSNFGGSSYRDRDSDRGFGNGPKPAFGGSKAQN
GGSYGGNSGNSGGSYGNSNYSNSNGQGNFGAPANQVGAFGNQSFQGPPQFGAMQRAAQNG
MNHPPFAFNSQQPPPQAQQPPPPPPMGPYPMPPPFPQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcttttcagacagggatcgtggcagagatagagggtatggtggaggaccccct
cgttttggtggtggtggtggtggtggaggcagcaggggtggacctcctgcaggaaagttt
ggcaaccctggtgagaggctgcgaaagaagcattggaaccttgatgaacttccaaagttt
cagaagaatttctaccaggaacacccagatgtcacccacagaccagttcaagaagttgag
cagtaccgcagaaacaaagaagttacagtcaaagggagagattgccccaaaccaatggtt
aaattccatgaagcatcatttccaagctatgtcatggatgtaattggaaaacaaaactgg
accgaaccaactccgattcagtctcaggggtggccagttgccctcagtggcaaagatatg
gttggcattgctcaaactgggtctgggaaaactcttgcataccttctgcctgcaattgta
cacatccaacatcagccattcttggagcatggagatggaccaatttgcttagtgctggca
ccaacccgtgagctggctcagcaggtgcagcaagtggcagctgagtatggcagggcctcc
cgtcttaagagcacctgcatctatggtggtgcacccaaaggaccacagatcagggacctt
gagaggggtgttgagatttgcattgctactcctggtcgtctcattgacttcctggagtgt
ggtaagactaatttgcgtcgttgcacctatctggtgttggatgaagctgaccgcatgctg
gacatgggatttgaacctcaaatccgcaagatagttgaacaaatcaggccagaccgccag
actctgatgtggagcgccacctggcctaaggaagttcggcagctggctgaggacttcctg
aaggactatgtccagatcaacattggagcactgcagctcagtgccaatcacaacatcctg
cagatagttgatgtttgcaatgacatggagaaggaggacaaactgatccgtttgctggag
gagataatgagtgaaaaggagaacaagaccattatttttgtggagacgaaaaggcgttgt
gatgaactcactaggaggatgagaagagatgggtggccagcaatgggaattcatggagac
aagagccagcaggagagggactgggtccttaatgagttcagatatggcaaagctccaatc
ctcattgctacagatgtggcctcccggggtttagatgtggaggatgtgaaatttgtcatc
aattatgactaccctaactcctccgaggattatatccaccgcattggacgcactgcccga
agtcaaaaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaagccagt
gacctgatctctgtgctccgcgaggctaaccaggccataaaccccaagctgatccagatg
gcagaggacagaggaggtcgcggaagggggggaagaggtggctacaaggatgaccgccgc
gataggtattctgggggtgggaggagcaactttggtggtagtagctacagggatagggac
agtgatagagggttcggcaatgggccgaaacctgcctttggtggcagtaaggcccaaaat
ggtggcagctatggaggcaacagtggtaactctggtggcagctatggcaatagcaattat
agcaacagcaacggacagggtaatttcggtgctccggcaaatcaggtgggtgcctttggt
aaccaaagctttcagggcccccctcagttcggggccatgcagagggccgctcagaatggc
atgaaccacccgccattcgcattcaactctcagcaaccaccaccacaggctcaacagcct
ccaccccctccaccaatggggccctaccccatgccaccacctttcccacagtag
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