Solea solea (common sole): 131466982
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Entry
131466982 CDS
T10853
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131466982 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131466982 (exosc9)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131466982 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
131466982
NCBI-ProteinID:
XP_058496620
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All DBs
Position
10:10821167..10826957
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AA seq
433 aa
AA seq
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MKETPLSNCERDFLLKAIEEKKRLDGRQTYDYRKIKIKFGTDYGCCFVDLGLTRVMAQVS
GELVAPKESRPNEGIMFFNIELSPMAAPTFEQGRQSELSVKLNRQLERCLRNSKCIDTES
LCVVSGEKVWQIRVDVHMLNHDGNLMDAASIAAITALCHFRRPDVSIQGDEVTVYSPEER
DPIPLSIYHMPISVSFSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHREICSIQSSGGI
MLLKEQVMRCSKIASVKVSEITELVVKALENDKKARKAGEKCGFAESLPQERITALKVGK
TPVEVMDVTEQANDIVQKAEVSPQTVPSPLVPVPGVGQVGQGQQTTWGLEEEEEEEEEVD
QEEEEESDDSTEQDKKVTKMEEEDSRGDVVEISDSEEEEVVILHPETADKALKNTGSSLH
QKGAAPSKQKRKK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagactcctctgtccaactgtgagcgggactttctgctaaaagccatcgaggag
aagaagcgtctggatggacgacagacctacgactacaggaaaataaagatcaagtttggc
acagactatggatgctgctttgtggatctggggttaaccagggtcatggctcaggtgtcc
ggggaactggtggctccaaaagaaagtcgaccaaatgagggaatcatgttcttcaacatt
gagctgtcgccaatggccgcaccaacgtttgaacagggcagacagtctgagttatcagtg
aagctcaacagacagctggagagatgcttgaggaactccaagtgcattgatacagagtcc
ctttgtgtggtatctggagagaaggtgtggcagatcagagtggacgtacacatgttgaat
cacgatgggaacctgatggatgctgccagcattgccgctattacagctctgtgccatttc
agacgccccgatgtcagcatccagggagatgaagtcacagtgtacagtccagaggagaga
gaccctattcccctgagtatctaccacatgcccatcagtgtcagcttctctttcttccag
caagggacgtatctgctggtggacccctgtgagcgggaggagcgggtgatggacggtctg
ctgatgatcgccatgaacaaacacagagaaatctgctccatccagtcgagcggtggcatc
atgctgctgaaggaacaggttatgagatgcagtaaaattgccagcgtcaaagtgtctgaa
atcacagaactagttgtcaaagccctggaaaatgacaagaaagccaggaaggcgggcgaa
aagtgtggctttgcagaatctcttcctcaggagcgaatcacagctctgaaagtgggcaag
actccagtggaggtgatggatgtgaccgaacaagccaatgacatcgtccagaaagctgag
gtctcgcctcagacagtaccatctccactggtgcctgtccctggtgtcgggcaggtgggg
caggggcagcagaccacctggggcctagaggaagaagaagaggaggaggaagaggtagac
caagaggaagaggaggaaagtgacgacagcactgaacaggacaagaaagtaacaaagatg
gaagaggaagacagcagaggagatgttgttgaaatatcagacagtgaagaggaggaagtg
gtcattcttcacccagagactgctgacaaggctctcaaaaacacaggatccagtttgcac
cagaagggggcagcaccttccaagcaaaaacggaaaaaatga
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