Solea solea (common sole): 131467023
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Entry
131467023 CDS
T10853
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131467023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoe03021
]
131467023
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131467023
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131467023
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
131467023
Chromatin remodeling factors
BAF complex
131467023
PBAF complex
131467023
GBAF(ncBAF) complex
131467023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
131467023
NCBI-ProteinID:
XP_058496682
LinkDB
All DBs
Position
10:complement(18363347..18383028)
Genome browser
AA seq
1692 aa
AA seq
DB search
MSTPDPPPIGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQAGP
SGYGQDSMHSLHKPMESLHEKSMSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYH
SPLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSASTPLDVPSGDQHTLGSGNRPGP
PGSSGPGPSPGPSLGPSISTLGSGLEPGGPTGPGGPGGPTPFNQNQLHQLRAQIMAYKML
ARGQPLPDHLQMAVQGKRPMPGMQQQQPMPSLAPGPGGGPAGPGPGPGPMGSGYSRAHGM
MGPNMPPPGPSGTPTGIQGQNPNGPPKSWPEGPLVNAAAPSNTPQKLIPPQPTGRPSPAP
PSVPPAASPVMPPQTQSPGQPVQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQ
ARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALD
PKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITG
KIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQ
QTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGQTPALGPDGEIKVQTLTGIL
PLQPLDETSQMSDLPVKVIHVDSGNILTGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDSE
EEEEEEEEEEEPQPSSTAVEEKKKITDPDCEDVSEVDVRHIIENAKQDVDDEYSGAAFAR
GLQSYYSVAHAVTEKVEKQSSLLINGQLKQYQVKGLEWLVSLYNNNLNGILADEMGLGKT
IQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVP
QLRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRR
VLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKMPNISLSLQVDLN
EEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVL
LTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGADLYR
ASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGM
LLKTFNEPESEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQN
EVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQD
EVWGQEVCLRINEEDEVPDDETVNQMIARSEDEFDQFMRMDLDRRREEARNPRRKPRLME
EDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKQAIEEGTLE
EIEEEVRHKKTTRKRKRDRDIDLPGPSSSSGGRGRGDKDDDGKRQRKRGRPPAEKLSPNP
PALTKKMRKIVDAVIKYKDSTSGRHLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIR
SHRYRSLGDLERDVMLLFQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEES
EDEEEEQDEGSESETRSVKVKIRLGRKDKGADRGKGRSRRTGRTRAKPVVSDDDSEDEQE
EERSPSATDEES
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaccagatcctccccccattggaggcaccccacgcccaggtccttcccctggt
ccaggtccctcccctggggcaatgctaggccccagccctggaccctccccaggctcctct
catagtatgatgggccccagcccgggtcctccatcctctggacactcccaggcaggaccc
tctggatatggccaggacagcatgcactctctgcacaaaccaatggaaagcctgcatgag
aagagcatgagtgaggagagccgcttcagtcagatgaagggactgtctatgagacagggc
gggcacagtgggatgggccccccacccagccctctggaccaacactcacaaggctaccac
tctccattaggtggctctgaccattccagtcctgtcccgtctaatggtcctccttctggt
cctctaatgccatcatcctcctcttcctcctcctctggtggccctggctctgcctctaca
cctttagatgttccaagtggagatcagcacacacttggttccggtaatcgtcctggtcca
ccaggtagctctggcccaggaccgagccctggacccagtcttggacccagcatctccacc
cttggatctggccttgaacctgggggtcctactggccctggaggtcctggtggaccaact
cccttcaaccagaaccaactccaccaactcagagcccaaatcatggcttataagatgctg
gctcgggggcagcccctaccagaccacctacagatggctgtccaagggaagaggccgatg
cctgggatgcagcagcaacagcccatgcctagtctggctcctgggcctggaggtggtcct
gcaggaccaggaccagggcctggcccaatgggctcaggctacagtcgagcacatggtatg
atgggtcctaacatgcctccaccaggcccatcagggaccccaactggaatacagggacaa
aacccaaatggaccacccaagtcctggcctgaaggtcctttggtaaatgcagcagcccct
tcaaacacaccacaaaagctgatccccccacaacccactggccgaccctctcctgcgccc
ccttccgttccccctgctgcctccccagtaatgcctccgcagacacagtcccctggtcag
ccagtacaacctactcccatgatgccttaccatgccaagcagaatcgcattacccccatt
caaaaaccctgcggcctcgacccagtggagatactgcaggagagggagtacaggttacag
gctcgtatcactcatcgtatcgctgaactggagaacctgcctggttctcttgccggtgat
ttacgtaccaaagcaacaattgagcttaaagctcttcgactgcttaacttccagagacag
ctgcgtcaagaggtggtggtgtgcatgcgccgtgacacagctctggagacggccctcgat
cccaaggcctacaagcgtagcaagcgtcagtctctgcgagaggcccgcatcacagagaaa
ctggagaaacagcagaagattgagcaagagcgcaaacgccggcagaagcatcaggaatac
ctcaacagcatcctccagcacgccaaagacttcaaagagtaccaccgctcgataacaggc
aaaattcagaaactgaccaaagccgtggccacctaccacgccaacactgagcgagagcag
aagaaggagaatgagcgtatcgagaaagagaggatgaggaggctcatggccgaggatgag
gagggctaccgtaaactgattgaccagaagaaggacaaacgtctggcctatctgctgcag
caaactgacgagtatgtcgccaacctcactgagctggtccgagctcacaaggccgcacag
gctctcaaagaaaagaagaagaagaagaagaaaaagaagaagttggagaacgctgaaggt
cagactcctgccttgggccctgatggagagataaaagtccagacgttaactggcatcctc
cccctgcagcctctggatgaaacaagtcagatgagtgacctgcctgtgaaggtcatccat
gtggacagtggaaacatcctgacaggggtggatgcacctaaagctggacagttggacact
tggctggagatgaaccctggctatgaggtggctccccgttcggacagtgaagacagcgaa
gaggaggaagaggaagaggaggaggaagaagagccgcagccttcgtcgactgcagtggag
gagaagaagaaaataacggaccctgactgtgaggacgtgtcggaagtagatgttcgacac
atcattgaaaatgcgaagcaggacgtggatgatgagtatagtggcgcagcctttgctcga
gggctacagtcttattactcagtggctcatgctgtgacagagaaggtggagaaacagtcc
agtttgttaataaatggacaacttaaacagtatcaggttaaaggtctggagtggctcgtt
tccctctacaacaacaacctgaatgggatcctggcagacgagatgggtttgggaaagacc
atccagaccatcgctctcatcacttacctcatggagcacaagcgtctcaatggaccctac
ctcatcattgtacccctctcaactctttctaactgggtgtacgagtttgacaaatgggca
ccaacagttgtcaaagtgtcctacaagggatctcctgctgccagaagagccttcgttccc
cagctacgtagtggaaaatttaacgttttgctcaccacctacgagtacatcatcaaggat
aaacaagtactagccaagatacgttggaagtacatgatcgttgatgagggccaccgtatg
aagaaccaccactgtaaactaacccaggttctgaacactcactaccttgccccacggcga
gtccttttgacagggacaccattgcagaacaagttgcccgagctctgggcactgctcaac
ttcctcctgcctaccatcttcaagagttgtagcacgttcgagcagtggttcaacgctccc
tttgccatgactggagagaagatgccaaatatttctctttctcttcaggtggatcttaac
gaagaggagaccatcttgatcatccgccgtctccacaaagtgcttcgccccttcttgctg
cgcaggttaaagaaggaagtggaggcgcagcttccagagaaggtggagtacgtgatcaag
tgtgacatgtcctctcttcagagagtgttgtacagacacatgcaggccaagggagttctt
cttactgacggatcagagaaagataagaagggtaaaggaggcacaaagacgctgatgaac
accatcatgcagctaaggaagatctgcaaccacccttacatgttccagcagatagaggaa
tccttttctgaacatttaggattctctggtgggatagtccagggagctgacctgtatcgg
gcatcgggaaagtttgaggtgttggatcgtatcctgcccaaactgagagcgacaaaccac
aaagttctgctcttctgtcagatgacttcactcatgaccattatggaggactactttgcc
taccgcagcttcaagtacctgcgtctagatggcaccacaaaggcggaagacagagggatg
ttactaaagacgttcaatgaaccagaatcagagtactttatcttcctcctgagtacaaga
gctggaggtctaggcctcaacctgcagtctgctgacaccgtggtcatcttcgactccgac
tggaacccacatcaggatctgcaggctcaggacagagctcaccgtattggtcaacagaat
gaggtgcgtgtgctccgtctctgtactgtcaacagcgtggaggagaaaatcttggccgct
gccaagtacaaattgaacgtggaccagaaagtcatccaggcaggcatgtttgatcagaag
tcttccagccacgagcgtagggccttcctacaggccatcctggagcatgaggagcaagac
gaggtctggggacaagaagtgtgtctacgcataaatgaggaggacgaggttccagatgat
gagacggtcaaccagatgatcgcgaggagtgaggacgagtttgaccagttcatgcgtatg
gacctagaccggcggcgagaggaggctcgaaatccgcggagaaaacctcgtctgatggag
gaggatgagctgcccacttggatcatgaaagatgacgccgaggtggagcggctgacctgc
gaggaggaggaggagaaaatgtttggacgagggtctcggcagcgaaaagaagtggactac
agcgactctctgaccgagaagcagtggctcaagcaggcaatagaggagggtacactggag
gagattgaggaagaggtacgacacaaaaagacgacccgcaagaggaagagagatcgtgac
atagatcttcccggtccctcctcctcgtcggggggacgaggacgaggggacaaagacgat
gacgggaagagacagaggaagagggggcgacctcctgctgagaaactttccccaaatcca
cctgcactcacaaagaagatgaggaagattgtggacgctgtcatcaaatacaaagacagc
accagtgggcgtcacctgagtgaagtgttcatccagctgccgtcacggaaagagctgccc
gagtactacgagctgatccgcaagcctgtggacttcaggaagatcaaggagaggattagg
agtcatcgctaccggagtctgggtgacctggagagagacgtcatgctgctcttccagaac
gctcagaccttcaacctggaaggatcgctgatttatgaagactccatcgtcctccagtcg
gtgttcaccagtttgaggcagaagatcgagaaggaggaggaaagtgagggggaggagagc
gaagatgaagaggaggagcaggacgaaggatcggagtctgaaactcgctcagtgaaagtg
aagatccgtctggggaggaaggataaaggtgcagatcgggggaagggacgcagcagacgg
acaggacgcaccagagccaagcctgtcgtcagtgacgacgactctgaggacgagcaggaa
gaggagcgatcccccagtgctactgatgaagagtcttaa
DBGET
integrated database retrieval system
