Entry |
|
Symbol |
lrba
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Name |
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
|
KO |
K24181 | lipopolysaccharide-responsive and beige-like anchor protein |
|
Organism |
ssoe Solea solea (common sole)
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Brite |
KEGG Orthology (KO) [BR:ssoe00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ssoe04131]
131467306 (lrba)
Membrane trafficking [BR:ssoe04131]
Endosome - Lysosome transport
Others
Others
131467306 (lrba)
Endosome - Golgi transport
131467306 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
131467306 (lrba)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
10:complement(4108336..4274283)
|
AA seq |
2968 aa
MASEETAVPPPADGKDGRSGTMAHNPGVPIRGIRMKFAVLVGLVEVGEVSNRDIVETVFN
LLVGGQFDLEMNFIIQEPDSIVCMVELLDKCEPTCQAEVWSIFTAVLKKSVRNLQACTDV
GLIQQILQRIATTDSMIADLLVDTLGVLASYSITVKELKLFFSKLQGQEGQWPRHAVKLL
SVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKDK
PYLYCFRTSKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHVYNRW
KNSEISCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQMGSVYLFGEAL
SPAQILAIYQLGPGYQGTFKHKAESDLLFAEHHKTLLYDGKLSSSIAFTYNPRATDAQLC
LESSPKDNLSIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYRQPSSL
ELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIVLAF
SRYLSNLQNGILLLKQLCDHILFNPVIWIHAPAKVQLTLYTYLATEFISTVTIYNAIRRV
GTVLQVMHTLKYYYWVVNPHDRSGVIPKGLDGPRPNHKEILSLRAFLLLFVKQLIMKDYG
VKDDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPGSLVQAFDQRNGIRVIYKLLASK
SEAIRVQALKVMGYFLKHLPPKRKSDVMLSHGLFSLLTERLMLHSSQFSMTTYNVLFEIL
TEQICTQVIHKQHPDPDSTVKILNPHILKVIAALLKNAPPSPESMEVRRFFLSDMIKLFN
NSRENRRSLLQCSVWQEWMLSLCFITPRNSEEQKITEMVYAIFRILLYHAIKYEWGGWRV
WVDTLSITHSKVTFEQHKENLSRMFSQYQRHDSAGSPNAIRTVSGVSQSSETLDCVNGSS
AEEAAPSTVIELRVDELSLTSPESASSPIVTPSQLETVDQRGHAAITVSNILARSEDDEK
KLCQGSSRDGSGDGHEIEVTTTQADTETQSQETDKQEAVTVSSADDDDDGLQTSATDSSE
TVDTKAVEVVGDSCTPPASGDAQTPADDEKRESEHNKGESSNSMTEDSLNEGDAEPAVVS
KPDVETDQMPPETEACQENRVLGGASIHNEDLVDMSSVSDQIHPSDVDGSQEESSFTSAA
AGEEGQVLKEDVEKHADDEGNKSDQDGKELKTSEEKDENITKDGESEASTLEQTSPVETS
EQNVTEASKEKVEDDQSSTIEETVTSDQQPTTDTTLPSVDAAEGTDSTSARQPSETSGTT
GEETLASAPESSTTTVSSSDTQKKPDSVSQTKEIKIARLDVSNVALDTERLELKGTTPTT
EMSQGQSAAAAAAAAAAAAAAAAAAAAAGSSSGQPTREGSTSAPRSTMFRIPEFRWSHMH
QRLLTDLLFSIETDVQMWRSHSTKTILDFVNSSENVVFVHNSIHLISQVVDNLIMACGGI
LPLLSAATSSSHELENIEPSQGLTVEASVTFLQRLINLVDVLIFASSLNFTEIEAEKNMS
SGGILRQCLRLVCAMAVRNCLECQQALCKHGTECTARNYAATPSAAIGASKSVSAQSPVD
AVTGGMSPVQDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDI
LEPHNDKKHPQRSQSSRSTDNIATAGGLEVENGVSLRRYDSGIGDDHTSTAASEAELSSS
SAAHGPDAISEALSTLSSEVRPALPSDSKGKNVKDILRSLVSAPGDDILVDPSLLPPAFL
GSVDDAAREQSISFDRSVIVAPKKAGMASLPSMSTPVPAVTAASVSAGTPMDSVAVVSSG
DASESISAEAAASGGQVPGSSSLPSVPPLSPVTQNTAPNMSISERLEHALEKAAPLLREI
FVDFAPFLSRTLLGSHGQELLIEGTSLMCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAF
IELVNEGRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKHAEFESNCAQYAADKRDEEKM
CDHLIRAAKYRDHVTATQLIQKIVNILTDKHGAWGKSSISRPREFWRLDYWEDDLRRRRR
FIRNPFGSAHSEATLKAAAEHVADISASEEDILKGKQSIRSHALGNQNSESETSLDVDDD
TLSSLDEKDLENLTGPVNLSTGAQLVAPAVVVKGTLSITASELYFEVDEDEPGFKAIDPK
ILTYTEGLHGKWLFTEIRAIFSRRYLLQNTALEVFLANRTAVMFNFPDAATVKKVVHSLP
RVGVGTNFGLPQTRRISLATPKQLFKASNMTQRWQRREISNFEYLIFLNTISGRTFNDLN
QYPVFPWVITNYDSEELDLTLPSNFRDLSKPIGALNPKRAAFFSDRYESWEDDQVPKFHY
GTHYSTASFTMMWLLRIEPFTTFFLNFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELI
PEFYYLPEMFVNANSYNLGVMEDRTRVSDVELPPWAKSPEDFVRINRLALESEFVSCQLH
QWIDLIFGYKQQGPEATRALNVFYYLTYEGAVNLSSITDPMLREAVESQIRSFGQTPCQL
LIEPHPPRSSAMQVYLLLQTPMMFTDQMQQDVIMVLKFPSNSPVTHVAANTQPGLTSPAI
ITVTANRIFAVNKWHGLAGHQGSTVQDQQYQLPVEIDPLIASYVGSHRRQISDLLDQSIQ
ISSQGFVITADNRFILLCGFWDKSFRVYSTDTGKLTQIVFGHRDVVTCLARSESYIGGDC
YVLSGSRDATLLLWYWNGKHSSIGESLGTEFTTPRAILTGHDCEVTCATVCAELGLVISG
CREGPCLIHSMNGDLLRTLEVPEQCTRPRLIQASTEGHCMVYYDKGHFCLFTVNGKLLGH
MEIEDSIKAMLLSRDGQYLLTGGDGGVVSVWQVHSLKQLFTYPGCDAGVRSMAISHDQRC
IITGMASGSIVLFYNDFNRWHHEYQTRY |
NT seq |
8907 nt +upstreamnt +downstreamnt
atggctagcgaggagacagcagtgccgccgccagctgatgggaaggacgggagatctggc
accatggcacacaaccccggggtgcccatcagggggatccggatgaagttcgccgtgctc
gttggcttggtggaagttggggaagtttccaaccgagacattgtggagactgtgttcaac
ctgttggttggtggccagtttgacctggagatgaacttcattatccaggagccggatagc
atagtgtgcatggtggagttgctggataagtgtgagcccacctgtcaggcggaggtctgg
agcattttcactgccgtcctcaagaagagtgtccgcaacctgcaggcgtgcacagatgtg
ggcctcatccagcagattctccagcgtatagccaccacagacagcatgatcgcagacctg
cttgtggacacgttgggtgtgctcgccagctacagcatcaccgtaaaggagctgaagctt
ttcttcagcaagcttcaggggcaggaaggccagtggcctcgtcatgcagttaagcttttg
tcagtgctgaagtacatggctcacagaaatggccccgactcctttttcagcttcccagga
aaaaatgcagctgcgatagcgctgcctcccatagcaaagtggccataccagaatggcttc
acattccacacgtggctccgcatggatcctctcaacaacatcaatgtagacaaagacaag
ccgtacctctactgtttccgcaccagtaaaggcctaggttactctgcgcactttgtgggc
ggctgtttgatagtgacctcattaaaatccaagggaaaaggattccagcactgtgtaaaa
tacgacttcaaaccacagaagtggtacatggtgacccttgttcatgtctacaaccgctgg
aaaaacagtgaaatcagctgctacgtgaacggggaactggcttcctttggagacattgcc
tggttcgtcaacaccagtgacacgtttgacaagtgtttcctgggatcgtccgagacggca
gatgccaaccgtgtgttctgtgggcagatgggatcggtttacctgtttggagaggctctc
agtcctgctcagatcctggccatctatcagctgggtccaggttaccagggcacgttcaag
cacaaagctgagagtgacctgctgtttgcagagcatcataagaccttactgtatgacggc
aaactgtcctctagtatcgccttcacctacaacccccgcgccacagatgctcagctctgc
ctcgagtcctcccctaaggacaacctctccatttttgtccattcccctcatgcactcatg
cttcaggacgtgaaggctgtggtgactcactctgtccagagtggtatacactcgattggc
ggcgtgcaggtcctctttcctttgtttgcacagttggattatcgccagccttccagcctt
gagctggacacttctgtctgctgcactttgctgtcctttgtgatggagctgttgaagaac
tcggtggcgatgcaagaacaggtcctggcctgtaaaggcttcctcgtcattggctacact
ttggagaagtcttccaaggtgcatgtgacgcggcccgtcctggacattgtgctggccttt
tccagataccttagcaacctgcaaaatggcatcttgctgctcaagcagctgtgtgaccac
attctgtttaaccccgtcatctggatccacgcccctgccaaggtgcaactgactctctac
acttacctggcgacagagttcatcagcacagtgaccatctacaatgccattcgcagagtg
ggcactgtgctccaggtcatgcatacactgaagtactactactgggttgtcaacccacat
gaccgcagtggggtcattcccaaaggcctagatggtccgaggccaaaccacaaggagatc
ctgtctctgcgagcgtttctgctgctgtttgtcaaacaactcatcatgaaggattatgga
gtcaaagacgacgagctccagagtatcctcaactacctcctcaccatgcacgaggacgac
aatctcatggatgtactgcagttgctggtggctttgatgtctgaacacccagggtcgttg
gtccaggcttttgaccagcgcaatgggattcgtgtgatttacaagcttttggcctcaaaa
agtgaagcaatacgagtgcaggcactcaaagtaatgggctactttctgaaacacttgcct
ccaaagaggaaatctgatgtcatgctgagtcacggcctcttctccctgctcactgaacgc
ctgatgctgcactcgagccagttctccatgacaacctacaatgtgctctttgagatcctc
acagagcagatctgcactcaagtgatccataaacagcatccggaccccgactccacagtg
aagattctcaacccacatattctgaaggtaatagctgctctgctgaagaacgctcccccg
tctcccgagagcatggaggtgcgcaggttttttctgtcagacatgatcaaactgttcaat
aacagccgagagaaccgcaggagccttctgcagtgctcagtgtggcaggagtggatgctc
tctctgtgcttcatcaccccgcgaaacagcgaggagcagaaaatcacggagatggtgtac
gccatcttccgtatcctgctctaccacgccatcaaatatgagtggggtggctggcgtgtc
tgggtggacaccctgtccatcacccattccaaggtgaccttcgagcagcacaaggagaat
ctgtctcgcatgttcagtcagtaccagcgacacgattctgcaggctctcccaacgcgatc
cgaaccgtctctggtgtgagccaaagctctgagaccttggattgtgttaatggatcatct
gcagaggaggcggccccttccactgtcattgagctccgagtggacgaactgtccctgaca
tctcctgagtcggcgtccagtcccattgtcacccctagtcaactggagactgtcgatcaa
aggggacacgcagccatcactgtgtccaacatcctggcaaggtctgaggacgatgagaag
aaattgtgtcaagggtcttccagagacggctcaggcgatggacatgagatagaagtaacc
acaacacaagcagatacagaaacacagagccaagagacggataaacaggaagctgtgacc
gtgtcctccgctgatgatgatgatgatggtctgcaaacatctgccactgactcgtctgaa
acagtggacacaaaagcagtggaggtcgttggagactcctgtactccacctgcaagtggt
gatgcacaaacaccagcagatgatgagaaacgtgagagtgaacacaacaaaggtgagtca
tcaaactccatgacagaagactctttaaatgaaggagatgcagaaccagcagtggtttca
aaaccagatgttgagactgatcaaatgcctcccgagaccgaagcctgtcaagagaatcgc
gtgctgggcggagcttccatccacaatgaagacctggtggacatgtcatctgttagtgac
cagatccacccgagtgatgttgacggaagccaagaggagtcctcttttacgtctgctgct
gctggagaggaaggccaagtattaaaggaggacgtcgagaaacacgcagatgatgaaggt
aataaaagcgatcaggatggaaaggagcttaaaacaagtgaagaaaaagacgagaacatc
acaaaagacggagagagtgaagcctccacgttggagcaaacgtctccagtagaaacatct
gaacaaaatgtgacagaagcatccaaagaaaaagttgaagatgatcagtcttctaccatc
gaggaaaccgttacttcagatcagcagcccaccacagacaccacattaccatctgtagac
gctgcagagggaacagactcgacctcagctcgtcagccttcggagaccagtggcaccact
ggagaggaaaccttggccagtgctccagaaagcagcaccaccactgtctccagctctgac
actcaaaagaaaccagactctgtcagtcagaccaaagagattaaaatcgccagactggat
gtgtctaatgtggccttagacaccgagagacttgaactgaagggcaccactccgacaaca
gaaatgagccaaggccagtcagcagcagcagcagcagcagcagcagcagcagcagcagca
gcagcagcagcagcagcagcagcaggaagttcttcaggtcagccgaccagagagggcagc
acctcggctccccgctccaccatgtttcgtatcccagagttccgatggtcccacatgcat
caacgcctcctcactgacctgttgttctctatcgagacagacgtccagatgtggaggagt
cactccacaaagacaattctggactttgtgaacagcagcgagaacgtcgtgtttgtccac
aacagcatacacctcatctctcaggtggtggacaacctcatcatggcttgtggaggcatt
ttgcctctgctgtctgcggccacctcctcctctcatgaactggagaacattgagccatcc
cagggtctgacagtggaggcttcagtcaccttcttacagcgcctcatcaacctggtggat
gttctcatctttgcaagctccctcaacttcacagagatcgaggcagagaaaaacatgtcg
tcgggaggcatcctccgacagtgcctgcgtcttgtgtgtgcaatggcagtgagaaactgt
ctggagtgtcagcaagccctatgtaagcacggcacggaatgcacagcacgcaactacgca
gccacgcccagcgctgcgattggagcgtccaagtctgtgtctgcgcagagtcccgttgac
gcagtgacaggtggaatgtctccagtccaagacctggaccgactgctgcaggacatggac
atcaaccgccttagggctgtcgtcttcagagatattgaggacagtaagcaggcgcagttt
ctggctcttgccgtagtgtacttcatctcggtcctcatggtgtccaagtaccgtgacatc
ctggagccgcacaatgataagaaacaccctcagcgctcccagtcttccaggagcacagac
aacatcgccactgccggtggactggaagtggaaaacggcgtctctctccggcggtatgac
tccggcatcggcgatgaccacacctcgaccgcggcgagcgaggcagagctgtcgtcgtcc
agcgcggcgcatggcccggacgccatctcggaggccctgtccacgctgtcctctgaggtc
agacccgcgctgccctctgattcaaagggcaagaatgtgaaggacattctgcgcagccta
gtcagtgctccgggtgatgacatcctggtggacccaagtctgctgccgcctgcgttccta
ggcagcgtggacgacgcggcccgagaacagtccatttcctttgatagaagtgtcatcgtt
gcacctaagaaagcaggcatggcgtcattgccgagcatgtccactcccgtcccagcagtg
actgctgcctctgtgtccgctgggacacctatggacagcgtcgctgtggtgtcttctggt
gacgcctccgagagcatctctgcagaagctgcagcttcaggcggccaggttccaggcagc
tctagcctgccatctgtccccccactctcccctgtgacccagaacacagcccccaatatg
agtatctcggagcgtttggagcatgctctggagaaggcggctcctctgctgagagagatt
ttcgtggactttgcccccttcctctctcggaccctgctgggcagccacggacaagagctc
cttattgagggcacaagcctgatgtgtatgaagtccagcagctcggtagtggagctcgtc
atgcttctgtgttcacaggaatggcagaactccatccagaagaacgcaggccttgccttt
atcgagttggtcaacgaaggcagactgttgagtcacaccatgaaagaccacctggttcga
gtggccaatgaagctgaatttattctcagccgacagagagctgaagacatccacaaacat
gcagaatttgagtctaactgtgcccagtacgcggccgacaagcgagatgaggagaaaatg
tgtgaccacctcatccgagcggccaagtaccgcgaccatgtgacagccacgcagctcatc
cagaagatcgtcaacatcctgaccgacaaacacggagcctggggaaagtcttccataagc
cggccgagggagttctggcgcctggactactgggaggacgatttaaggcggcgacgccgt
ttcatcaggaacccctttggatccgctcactcagaggcgacgctcaaagccgcggccgaa
cacgtggctgatatcagtgcatccgaggaagatattctcaaaggcaagcagtccatcagg
agtcatgctctgggaaatcagaactcggagagtgagacatcacttgacgtggatgatgac
actctgtccagtttggacgagaaggacctggagaatttaacaggcccagtaaacctgagc
accggcgcgcagctggtggctccggctgttgtggtgaaaggaactctgtccatcaccgcg
tccgagctctacttcgaggtggacgaggacgagccgggcttcaaggccatcgatccgaag
attctaacctatactgaaggccttcatggaaaatggctgttcacagagatccgcgccatc
ttttccagacgctacctgcttcagaatactgctctggaagtctttctggccaacaggacg
gcagtcatgttcaatttcccagatgctgccaccgtgaagaaggtggtccacagtcttcct
cgtgtcggggtgggcacgaactttgggcttccacagaccaggagaatctccctggccaca
ccaaagcagctgttcaaagcatccaacatgacccagcgctggcagcgtcgggaaatctcc
aactttgagtacctcatcttcctcaacacaatctctggtcgcacctttaatgaccttaac
cagtaccctgtcttcccatgggttatcaccaactatgactcagaagaacttgacctcact
ctacccagcaacttcagagatctgtctaagcccattggtgctctgaatcctaagagagca
gcattcttttcagaccggtatgagtcctgggaggatgatcaggtaccaaagttccactat
ggcacccactactccaccgccagcttcaccatgatgtggctactccgcattgagcccttc
accaccttcttccttaacttccaaggaggaaagtttgaccatgccgaccgcaccttctct
tcagtgtcacgggcctggaggaactgccagagagacacgtctgatgttaaggagctgatc
ccagagttctactaccttcctgagatgtttgtcaatgccaacagttacaacctgggggtg
atggaagatcgcaccagggtctctgacgtggagctgccgccctgggccaagagcccggag
gattttgttcgaatcaatcgcctggctctggagagtgagtttgtgtcctgccagctccac
cagtggatcgatctgatcttcggctacaaacagcagggacctgaagccaccagagccctg
aatgttttctattatctgacctatgaaggtgcagtcaacctcagctccatcactgatcca
atgctcagagaggctgtggaatctcaaatcaggagttttggacagacgccctgccagttg
ctcatcgagccacacccaccccgaagctcagccatgcaagtgtatcttctcctgcagacc
ccgatgatgtttacggaccagatgcagcaggacgttatcatggtgctcaagttcccatcg
aactctcccgtgacccacgtagcagccaacacccagccaggtctgacgtcaccggccatc
atcactgtcaccgccaaccgcattttcgcggtcaacaaatggcacggtttggcaggtcat
cagggctcaacggtgcaggaccagcagtaccaacttcctgtggagattgacccgctcata
gcgagttacgtcggcagtcaccggcgtcagatctcagacctgctggatcagagcattcag
atcagctcgcagggcttcgtcatcacagccgacaacagatttattcttctgtgcggattc
tgggacaagagcttccgggtttactccactgacacaggcaaactgactcagatagtgttt
ggccaccgtgacgtggtgacgtgtctggcgcgctccgagtcgtacatcggaggagactgc
tacgtcctgtcaggctccagagatgccaccctgctgctgtggtactggaacggaaagcac
agcagcatcggagagagcctcggcacagagtttaccacaccgcgggccatcttgactggc
catgactgtgaagtgacgtgtgctaccgtgtgcgcggagctgggtctggtcatcagcggc
tgcagagagggtccttgtctgatccattccatgaatggggaccttctgaggaccctggag
gtcccagagcagtgcactcggccccgtctcatccaggcgtccaccgagggacactgcatg
gtctattacgacaagggacacttttgtctcttcaccgtcaacggcaaactcctgggacac
atggagatagaagacagcatcaaggccatgcttctgagtcgtgacggtcagtacttgctg
acggggggagatggaggagtcgtgtcagtctggcaggtccacagtctcaagcagctcttc
acgtatcctggctgtgacgcgggagtccgatccatggccatctcacatgaccaaaggtgc
atcatcaccggcatggcgtctggaagcatcgtgctcttctacaacgacttcaacaggtgg
caccacgagtaccagaccaggtactga |