Solea solea (common sole): 131467527
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Entry
131467527 CDS
T10853
Symbol
pdgfba
Name
(RefSeq) platelet-derived growth factor beta polypeptide a isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04010
MAPK signaling pathway
ssoe04020
Calcium signaling pathway
ssoe04510
Focal adhesion
ssoe04518
Integrin signaling
ssoe04540
Gap junction
ssoe04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131467527 (pdgfba)
04020 Calcium signaling pathway
131467527 (pdgfba)
09133 Signaling molecules and interaction
04518 Integrin signaling
131467527 (pdgfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131467527 (pdgfba)
04540 Gap junction
131467527 (pdgfba)
09142 Cell motility
04810 Regulation of actin cytoskeleton
131467527 (pdgfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssoe04052
]
131467527 (pdgfba)
00536 Glycosaminoglycan binding proteins [BR:
ssoe00536
]
131467527 (pdgfba)
Cytokines and neuropeptides [BR:
ssoe04052
]
Cytokines
Growth factors (RTK binding)
131467527 (pdgfba)
Glycosaminoglycan binding proteins [BR:
ssoe00536
]
Heparan sulfate / Heparin
Growth factors/receptors
131467527 (pdgfba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
131467527
NCBI-ProteinID:
XP_058497475
LinkDB
All DBs
Position
10:complement(25011394..25033411)
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AA seq
547 aa
AA seq
DB search
MRSWVLVVLLAALSAARLRPGSSEGDPLPPSLVDLVRNSPISSVDDLKLLLEQETNAIEE
EEDEHDILTNHTHGRYTRSLVEAQPAEPASCKVRTEVMEVTRSMLDRRNANFLLWPSCVE
VQRCSGCCNTRFQQCVPVVTSSRYLQVIKIQYINKKAHYEKAIISVEDHVTCRCQSSSSS
SSSSSLPVTHPNPPQPAPQQTPPSSHLPLPRTVHPAPPKTHTSKADLHRHDDLKHNQQRY
RPEERDPVARQWQQGSYTQLVHWTQPRAPTHVQSGVHQPIAGVLGSVGSWPSEARGEHSV
MGSKQQVGHGSGYDGSKEEGSMHAASSGGEVHHPDHAQRQQQAVQHQQRQQYQYHHQQYN
HGGAEDQELRTQYRLNGPQSDSASPPSIPTKPPTSGQYPTLPLTTRQKDTVTSQKNIEVT
THTQTLTEEVIQKGVGEREESGSTVSGDSTVAERPSEGKETDSKLTIDDGPFTEEERRQK
LLAMVQSDQDKQTHLHPQRPKPTAQSTGAPSSASAHQAPLRPASHRRRRKHRKRISKAAI
RAMIMSW
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtcctggtggtgctgttggctgcgctgtcagcggctcgtctgcggccc
ggcagctctgagggcgatcctctccctccgtcgctggtcgacttggtgaggaactcaccc
atctcctctgtagacgacttgaagctgctgctggagcaggagaccaatgcaatagaagag
gaagaagatgagcacgatattctcacaaaccacacccatggcagatacactagaagtctt
gtggaggcgcagccagcggagccggcaagctgtaaagttcggacagaggtgatggaggtg
accaggtccatgctagaccgccgcaacgccaatttcctgctgtggccgtcctgcgttgag
gtgcagagatgttctggctgctgcaacacaaggttccagcagtgcgtccccgtggtcacg
tccagcagatatctgcaggtgataaagatccagtacattaataaaaaagcccactatgaa
aaagccataatctccgtggaagatcatgtcacctgcaggtgccagtcctcttcgtcctct
tcatcgtcctcgtcccttcccgtcacccaccccaatcctcctcaacctgcaccacaacag
actccaccgtcttcccacctgccccttccccgcaccgttcaccctgctccacccaagact
cacacctccaaggccgacctccatcgccacgacgacctgaagcacaaccagcagcgctac
cgtccggaggagcgcgacccggtggccaggcagtggcaacaaggcagctacacccagctg
gtgcactggacgcaacctcgggcgcccacgcacgtacagtcaggtgtgcaccaacccatc
gccggggtgcttgggtctgtgggtagctggccatctgaggcaaggggggagcacagtgtc
atgggaagtaagcagcaggtcgggcatgggagtggctatgacgggagcaaggaggaaggc
agcatgcacgcggcaagcagtggcggcgaggtgcatcatcctgaccacgcccagaggcag
cagcaggcagtgcagcatcaacagagacagcagtaccagtatcatcaccaacagtataac
catggaggagcggaggaccaggagctgaggacgcagtatcgactcaacggcccccaatca
gacagtgcctccccacccagcatcccgaccaagccgcccacatcaggacaataccccacc
ctccctctgaccacacgccagaaagacacagtgaccagccagaaaaatatagaggtcaca
actcacacacagactttgactgaagaagtcattcaaaaaggagtgggcgagagagaggaa
agtggctcaactgttagcggggactcgactgtggccgagcgccccagtgaagggaaggaa
acagactctaagttgaccatagatgatggtccttttacagaggaggagaggagacagaaa
cttctagcgatggtacagagcgaccaggataaacaaactcatctccatccacaaagacca
aagccgacagcacagtccactggggctcccagctcagcctctgcacaccaggccccctta
cgcccggcctcgcatcgccgcaggaggaaacaccgcaaacgcatcagcaaagcagccatc
agagcaatgatcatgagctggtaa
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