Solea solea (common sole): 131467582
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Entry
131467582 CDS
T10853
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04137
Mitophagy - animal
ssoe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131467582 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
131467582 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131467582 (zgc:136908)
03009 Ribosome biogenesis [BR:
ssoe03009
]
131467582 (zgc:136908)
04131 Membrane trafficking [BR:
ssoe04131
]
131467582 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssoe04147
]
131467582 (zgc:136908)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131467582 (zgc:136908)
Ribosome biogenesis [BR:
ssoe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131467582 (zgc:136908)
Membrane trafficking [BR:
ssoe04131
]
SNARE
SNARE associated proteins
Others
131467582 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131467582 (zgc:136908)
Exosome [BR:
ssoe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131467582 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_33
CDC48_2
AAA_2
AAA_22
TIP49
RNA_helicase
Vps4_C
AAA_14
NPHP3_N
AAA_28
Parvo_NS1
ATPase_2
nSTAND3
Mg_chelatase
AAA_7
DUF815
ATPase
AAA_18
IstB_IS21
NACHT
AAA_17
ABC_tran
AAA_24
TsaE
ResIII
Sigma54_activat
NB-ARC
Viral_helicase1
PhoH
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
131467582
NCBI-ProteinID:
XP_058497554
LinkDB
All DBs
Position
10:complement(20864584..20873927)
Genome browser
AA seq
806 aa
AA seq
DB search
MRGSGGADSKGEDFSTAILKQKQRPNRLVVDEVINEDSSIVSLSQNKMEELQLFRGDTVV
LRGRKQRQTVCIVLTDDTCADERIRMNRVTRSNLRVRLGDVISIHACPDIKYGKKIHVLP
IDDTIEGLTGSLFEVFLKPYFLEAYRPVHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVMYCEGEPIKREDEEENLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLADDVDLERIAMDTHGHVGADLAALCSEA
ALQAIRKKLILIDLEDESIDADLLNSMAVTMDDFKWALSQSNPSALRETVAEVPQVTWVD
IGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGSAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRTAILN
ANLRKSPVARDVDLEYLSNITDGFSGADLTEICQRACKLAIREAIEAEIKAERQRQNRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
TEGQGSSSGSGRSNLYREEGDDDLYQ
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggctcaggaggagcagactcaaagggagaggatttctccaccgccatcctaaag
cagaagcagagacccaacagactcgtcgtggatgaagtcatcaatgaagacagcagcatt
gtcagcctgtcacagaataagatggaggagctgcagctcttccggggggacacagtggtg
ttgagagggcggaaacaacggcagacagtgtgcatcgtcctaactgacgacacctgtgcg
gatgaacggatccggatgaatcgcgtgacgcgtagtaacctgcgcgtccggcttggtgat
gtcatcagtatccatgcctgccctgatatcaagtatggaaaaaagattcatgttctcccc
atagatgacaccattgaaggcctgactgggagcctctttgaggttttcctcaaaccgtac
tttctggaggcttaccggcccgtacacaaaggtgacatcttcctggtgagggggagcatg
cgagcagtggagttcaaggtggtggaaacagaccccagccctcactgcatcgtcgcccca
gacactgtcatgtactgtgagggagagccaatcaaaagagaggacgaagaggagaaccta
aatgacatcggctacgatgacatcggaggctgtcgaaagcagctcgctcagatcaaagag
atggttgaacttcctctcagacacccgggtctcttcaaggcgataggagttaagcccccc
agaggcatcctgctgtacggccctgcagggacaggaaagaccctggtggcccgagctgtc
gccaatgaaaccggtgccttctttttcctcatcaatgggcctgagatcatgagcaaactg
gcgggagagtcggagagcaacctaagaaaggcgtttgaggaagcggagaaaaacgctcca
gccatcatcttcattgatgagttggatgcaatcgctcccaagagagagaagacccacggt
gaggtagagcggcgtatcgtgtcccagctcctgaccctgatggacggcctaaagcaaaga
gctcatgtggttgtcatggcagcaacaaaccggcctaacagcattgaccctgctctgaga
cgctttggcaggtttgatcgtgagattgacattggaatcccagattcgaccggcagactg
gagatcctgcagatccacaccaaaaacatgaaactggctgatgatgtcgatctagagagg
atcgccatggacacccatggtcatgtgggcgctgacctggcggctctgtgctcagaagct
gctttgcaggccattcgcaagaagttgattctcatagacctggaggatgaatccattgat
gctgacctgctcaactcaatggctgtcacgatggacgacttcaaatgggcgctgagtcag
agcaacccatcagctctgagagagactgttgcagaggttcctcaggtcacttgggtggac
atcggaggactggacgaggtcaagagagagctacaagagcttgttcagtaccctgttgag
tatccggacaaattcctgaagtttgggatgacaccgtcccgaggcgtgttgttctacggt
cctccgggctgcgggaaaacccttctggctaaagccattgccaacgagtgccaagcaaac
tttgtctccattaaaggtcctgagatgctcaccatgtggtttggagagtcagaggccaat
gtcagggacgtgttcgataaggccagacaggcagcgccctgcatcttgtttttcgatgaa
ttagactccattgctaaatccagaggcggcagtgctggggacgcaggtggcgcagccgac
agagtcatcaaccagatcctcaccgagatggacggcatgtctgacaaaaagaacgttttc
atcattggtgccaccaacagacctgacatcatagactcagccatcctgagacctggccgt
ttggaccagctcatctacatcccactcccagacaaaccgtctcgcaccgccatcctaaat
gccaacctacggaaatctcctgttgcacgtgacgtggatctggagtacctgtccaacatc
acagacggtttctccggagctgacctgacagagatctgccagcgagcctgtaagctggcc
atccgtgaggcgatcgaggctgagatcaaggctgagcgtcagaggcagaacagaccagga
attcccatggatgaggatttcgatccagtccctgagatcagaaaggaccactttgaagag
gcgatgcgatttgcccgtcgctctgtcagtgacaacgacatccgaaaatatgagatgttt
gctcaaacgctgcagcagagccgaggttttggaaatttcaggtttccctctgctactggg
actgaaggtcaggggtcaagctctgggtcaggaaggtcaaacctgtacagagaagaaggt
gatgatgatctgtatcagtga
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