KEGG   Solea solea (common sole): 131467619
Entry
131467619         CDS       T10853                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    131467619 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssoe03021]
    131467619 (taf5)
   03036 Chromosome and associated proteins [BR:ssoe03036]
    131467619 (taf5)
Transcription machinery [BR:ssoe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     131467619 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     131467619 (taf5)
Chromosome and associated proteins [BR:ssoe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     131467619 (taf5)
    STAGA complex
     131467619 (taf5)
    TFTC complex
     131467619 (taf5)
    SAGA complex
     131467619 (taf5)
    SLIK complex
     131467619 (taf5)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st TFIID_NTD2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_SPT8 Tricorn_2nd Beta-prop_DCAF12 LisH_PAC1 WD_LRWD1 VPS8_N PEP5_VPS11_N Beta-prop_WDR35_TULP_N PROPPIN DUF7165 Beta-prop_WDR11_2nd Beta-prop_RIG_1st Beta-prop_ELP1_1st RAB3GAP2_N LisH_TPL
Other DBs
NCBI-GeneID: 131467619
NCBI-ProteinID: XP_058497612
LinkDB
Position
10:22710673..22715532
AA seq 751 aa
MAAVQGGLVDADNEKDIKTEPPSDGWVNNNANDGKVLSASPGSSATAGSNKPAAATTATA
AGTPEDQQTLLAVLQFLRKNNLSESVEILRREAGLPENSLEAKAGDSSGTGGADTDAGDS
SSLLSRVTVSSSARAPSPKKATAGEDQPDVNVVLSAYSQQGDPALYDVYYSGLKKFIETV
LDCHRAELSQVFYPLFVHMYLELVYNNHESEAKAFFAKFSGDQECYYEDDLRILSSLSKK
EHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGIPRS
KSQIDAMSGSLAGEGRREANKTKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKD
SMGSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKKIRLGPDNLPSICFYTFLN
AYQGLTAVDFTDDSSLIAGGFADSTVRVWSITPKKLRKVKSAADLNVIDKESDDVLERIM
DEKTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLLTFTCLVGYKGHNYPV
WDTHFSPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYLATGSSD
RTIRLWDVLNGNSVRIFTGHKGPIHTLAFSPNGKFLASGATDGRVLLWDIGHGLMITELK
GHTDTIYSLKFSRDGEILASGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQEL
LLGTYMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq 2256 nt   +upstreamnt  +downstreamnt
atggcggccgtacaaggtggtctggtcgacgcggataatgagaaagacataaaaacggaa
ccaccaagcgatggatgggtaaataacaatgcgaacgacggcaaagtgctctccgcgtcg
cccggctccagcgctacggctgggagcaacaaaccggcggcggcgacgacggcaacggcg
gcgggaaccccggaggaccagcagacgctgttggcggtcctgcagttcctcagaaagaac
aacctgagcgagtctgtcgaaatactacgccgtgaagcgggtctaccggagaattcactg
gaagcgaaggcgggagactcgtctgggactggaggtgcggacacagatgccggtgattca
agctctcttctcagccgggtgaccgtctcatcctcagccagagcaccgtcgccgaaaaaa
gctacagctggggaggatcagccagatgtgaatgtggtgctgtcagcttacagccagcag
ggagacccagctctgtatgatgtttactacagtggcctgaagaagttcatagaaaccgtt
ttggactgtcacagggcagagctgtcacaggtcttctacccgctgtttgtgcacatgtat
ctggagttggtgtacaacaatcatgaaagcgaggccaaggctttttttgcaaagttcagt
ggggaccaggagtgctattatgaagatgacttgcgtattttgtccagcctttcaaagaag
gagcacatgaggggcaatgaaactctccttgatttccgcacaagcaaatttgtcctgcgc
atctcccgtgattcttaccagcttctgaagagacatctgcaggagcggcagaacaaccag
atctggaatattatccaagaacacctctacattgacatttttgatggcattccacgcagc
aagagccagattgatgccatgtccggcagcttggctggagagggaagacgagaagccaat
aagaccaaggtttactatggattactgaaggagcctgagattgagcttccccttgatgat
gaggatgaggaggcagagaacgaggaggggaaacccaagaagaagaaaccaaaaaaggac
agtatgggctccaaaagcaaaaaacaggatccaaatgcaccctctcaaactaggatacct
ctgccggaattaaaggattcagacaaactagataaaatcatgtacatgaaagaagcgacc
aagaagatccgtctaggaccagataacctcccgtccatctgcttctacactttcctaaat
gcataccagggtttgactgcagtggacttcacagatgactccagtctgattgcaggaggc
ttcgctgattccacagtgcgggtgtggagcatcacaccaaagaaactccgcaaggtcaaa
tctgcagcagacttgaacgtgattgacaaagaatctgatgatgtgctggagaggatcatg
gatgagaagacggccagtgagtcaaagatcctctacggacacagtggtccagtatatggc
atcagcttcagcccggacagaaactacctattatcaagttctgaagatggtactgtcagg
ctgtggagtcttttaacatttacttgtctagtgggctacaagggccacaattacccagtg
tgggacacccacttttctccccatggctactattttgtctctggaggacatgacagagtt
gcccgtctttgggcgacggatcactaccagcctctacggatattttctggccatctagcg
gacgttacctgcacccgctttcaccccaactccaattatttagcgacggggtcgtctgac
cgcaccatccgcctctgggacgtccttaatggaaactctgtccgtatattcacaggtcat
aagggtcctatccatacactggctttctctccaaatgggaagttcttggcctctggagcc
acagatggaagagttcttctgtgggacattggtcatgggctgatgattacagagctcaaa
ggccatactgataccatctactccctgaagttcagcagggatggcgagatccttgcctct
ggttccatggacaacaccgttcgtctgtgggacgcaacgaaagcatttgatgatttagag
accgatgacttcacagcagctacgggacacattcatctacaagataactcacaggagctg
ctgctgggcacctatatgactaaatcaacacctgtcatacaccttcacttcacccgaagg
aacctactgctggctgctggtgcctacaatccatag

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