KEGG   Solea solea (common sole): 131467662
Entry
131467662         CDS       T10853                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    131467662 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssoe03021]
    131467662 (taf5l)
   03036 Chromosome and associated proteins [BR:ssoe03036]
    131467662 (taf5l)
Transcription machinery [BR:ssoe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     131467662 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     131467662 (taf5l)
Chromosome and associated proteins [BR:ssoe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     131467662 (taf5l)
    STAGA complex
     131467662 (taf5l)
    TFTC complex
     131467662 (taf5l)
    SAGA complex
     131467662 (taf5l)
    SLIK complex
     131467662 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_IFT140_1st RMC1_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st Tricorn_2nd PROPPIN PEP5_VPS11_N WD_LRWD1 WD40_like Beta-prop_IP5PC_F Nbas_N AAA_3 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 131467662
NCBI-ProteinID: XP_058497673
LinkDB
Position
10:complement(29547830..29552412)
AA seq 600 aa
MKRGRTEQIQYSVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCVNIVSAA
PCQSDPQQYETQFSRLRSFLSETEIPWAKEVSSVLYPLFVYLHLDMVRCGLKGAVDGFYS
RFHGAFLQDGEQRATVEQLRHVLTAQDVVANPKLSAFLEHKYVIHLTEPAYGYLLRYLQS
EDNSALCRALSTHLQLEVTDSRRTDYQLYGAAGGATVTPNSASSWAGVDGAEGGEGVEVP
AGIPQSETALEALQDCIKKVREGPPSLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDC
STVKLWSLLARKLKAKAHRADVSRIHLACDVLEEEVDEEDVCGSEIKTLRGHSGPVFRTC
FLTDSSGLLSCSEDTTVRYWDLGSFTNTALYRGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYAMRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLTFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDVRNSHCGTPADGSSSELVGLYTGNASNILKVQFMACNLLLVTGTAQEKTEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcggggtcgcactgagcagatccagtactccgtggctcagtacctgaagaggagg
cagtatgtggacactgacggctccctgaagggagccaaactcttccagtcagcggaggaa
atggctgccagcctcacagtgcagacggagtcgggttgtgtcaacatcgtctctgctgct
ccctgtcaatcagatccacagcagtatgagactcagttctccagactgcgctccttcctg
tcagagacggagattccctgggcgaaggaggtgagcagtgtcctctacccgctctttgtc
tacctccacctggacatggtgcgctgtggcctgaagggggcagtagacggtttctacagt
cgtttccacggcgccttccttcaggacggcgagcagcgggccaccgtggagcagctccgc
cacgtcctcaccgctcaggacgtcgtggccaatcccaagctgagcgctttcctggagcac
aagtatgtgattcacctgacggagccggcctacggctacctgctgcgctacctgcagagc
gaggacaacagcgccctctgcagggccctcagcacacacctgcagctggaggtcaccgac
tccaggcgaacggactaccagctgtacggagccgcgggcggggccaccgtcacaccaaac
tccgcctcctcctgggcgggtgttgacggtgcggagggcggggagggagtggaggtccct
gccgggatcccgcagagcgagacggccctggaggcgctgcaggactgcatcaagaaggtc
cgcgaaggcccgccctcgctcaccaccgtgtgtttctacgccttccaccacacggagcag
atgctgaacacggccgaggtgtcggccgacagccggctgcttgccgcgggcttcgactgc
tccacggtgaagctgtggagtctcctcgccagaaaactcaaggccaaagctcatcgggcc
gacgtgtcgcgcatacacctggcctgcgacgtcctggaggaggaggtggacgaggaggac
gtctgcggcagcgagataaagactctgcgaggtcacagtggccccgtcttccgcacctgc
ttcctgacggacagctccggcctcctgtcctgctctgaggacaccaccgtccgctactgg
gacctgggcagcttcaccaacacggcgctctaccggggccacgcctacccagtgtgggac
gtggacgtcagcccctgcagcctctacttcgccagcggctcccacgaccgcactgcccgc
ctctggaccttttcccgcacgtacgcgatgcgtctctacgccggccacctcgccgacgtc
gactgtgtcaagttccacccaaactccaactacctggccaccggctccacggacaaaact
gtgcggctgtggagcacccagcagggggcgtctgtgcgcctcttcactggccaccgcggc
cccgtgctctctctgactttctcacctaacggtaagtacttggcatcggcgggcgaggac
cagcgggtgaagctgtgggacttggcgtccgggacgctgttcaaggacttgcgtggacac
acagacagcgtcaccagcctgtctttcagcccggacagcagcctggtggcatcgtcctcc
atggacaactcggtgcgggtgtgggacgtccgtaactcccactgtgggacgccggccgac
ggctcgtccagtgaactggtgggactgtacacgggcaacgccagcaacatcctcaaagtc
cagttcatggcctgtaacctgctgctggtgacggggacagcacaggagaagacggagcag
tag

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