Solea solea (common sole): 131468433
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Entry
131468433 CDS
T10853
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131468433 (ddx20)
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131468433 (ddx20)
Spliceosome [BR:
ssoe03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
131468433 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
CENP-B_dimeris
AAA_19
Motif
Other DBs
NCBI-GeneID:
131468433
NCBI-ProteinID:
XP_058498643
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All DBs
Position
11:complement(26090212..26097814)
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AA seq
740 aa
AA seq
DB search
MAASVKKAAHDINSRQRTEDVLLSDNIDFASLLLSAAVLDGLSAAGFNKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENPATQVLVLAPTREIAVQIHSVVMAIGC
SMEGLQCHVFIGGRPVSQDKPHLKRCHIAVGSPGRIKQLIELGMLSTSSIRLFVLDEADK
LLEEGSFQEQINSIFSSLPVNKQMLALSATYPESLAQYLTRYMREPTFVRLNPGDLGLRG
VKQYYRLVQCNASPHRVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQQLADILSSKGLP
AACISGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCGLNLSVLPSVMEAGLMDEPCDWDVCT
QASTPASFSKVRTEKKKQTKLPAAAAAVSASEVTVEQRPRTLRRGAHGEGDAKNKSVSPT
QAALTRQQLQDALPKISALSSFKSRTSTLMTFEEAERDFQTFITTGLGRSVEIVREFRGR
DDDGNEERHSEYVTLHDDGSQTVTQPPPVSAPSSSEEEEITADLNHTGGENGATTQLPEP
KTSPKSGPEIHHPSSSQSQRREPEPSVRTKTRNNQERRNEPRKSKEESERRQFSEKTSRK
PKRDRDDEEEEEEEEEEDEEEEEEWSAEGYWRACYRAWSDYYASMSPFQQRGHHSYYSGA
HSWMAAYRMNSVYVEELMKH
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgtgaagaaggcagcgcacgacatcaacagtcgtcagcggactgaagac
gtccttctgtcggacaacattgacttcgcttctctgctgctttctgccgcggtgctggac
ggactgtccgccgcgggattcaacaaaccgtcgccgatacaactgaaggcgatcccgctg
ggccgctgtggcctcgatttgatcgtgcaggcgaagtctggtacgggaaagacgtgcgtg
ttcagcaccatcgccctggactccctggtcctggagaatcctgccactcaggttctcgtg
ttggctcccacgcgtgagatcgcggtgcagatccactcagttgtcatggcgatcggctgc
tccatggagggtctgcagtgtcacgtgtttattggaggtcgacctgtgagtcaggacaaa
cctcacctgaagaggtgtcacatcgccgtgggttcacctggtcgtattaagcagctcata
gagttggggatgttgtcgaccagcagcatcagactgtttgttctggacgaggccgacaag
ctgctggaggagggaagtttccaggagcagatcaactccatcttctcttctctgcctgtg
aacaaacagatgctggcgctctctgccacttacccagaatcccttgcacagtacctaacg
cgctacatgagagagccgacctttgtgagactgaaccccggtgacctcggcctcagaggt
gtgaagcagtactacaggctggtgcagtgtaatgcgtcgcctcacagagtgtttgaggag
aaggttcagcatcttctggaactgttcagcaaaatcccctttaaccaagcactggtgttt
tctaacctacacacacgagctcagcagctggcagacatcttgtcctctaaaggtttacct
gctgcttgtatttcaggtggactgagtcaggaccagagactggaggccatgtctaaactg
aagcagtatcagtgcagagtcctcatctccactgacctgacgtccagaggcatcgacgca
gacaaagtgaacctggtgataaacttggacgttcctcaggactgggaaacctacatgcac
aggattggacgagcgggacgcttcggtactcagggtttggccgtgacctactgttgccat
ggcgaagaggagaacaagatgatggccatagctcagaagtgtggccttaatctgtctgtg
ttaccatcggtgatggaggcggggctgatggatgaaccatgtgactgggacgtctgcact
caagcttccactccagcctccttttctaaggtcaggacagagaagaagaagcagacgaag
cttcctgctgctgctgctgctgtttcagcctctgaagtcacagtggaacaaagaccgcgc
actctgaggagaggagcacacggggaaggagacgctaaaaacaagtctgttagtccaact
caggcggcgttgactcgacaacagctgcaggacgctttaccaaagatctctgctctcagc
tccttcaagagtcgcacgtcaacactcatgacctttgaggaagcagagagggatttccag
accttcatcaccacaggtttggggaggtcggtggagatcgtcagggagttcagaggtcga
gacgacgacggcaacgaagaacggcactcggagtacgtcacgcttcacgacgacggctca
caaactgtgacgcaacctcctccagtttctgctccctccagctctgaggaggaggagata
acggcagatttaaatcacactggaggagagaatggagcaacgacgcaacttcccgaaccc
aaaacgagtcccaagtctggaccagagatccatcatccatcttcatctcagagccagaga
cgagaacctgaaccgagcgtcagaacaaagaccagaaacaaccaggagagaagaaacgag
ccgaggaagagcaaagaggagagcgagagacgccagttctcagagaagacgagtagaaaa
ccaaagagggacagagatgatgaggaggaggaggaggaagaagaagaagaagacgaagaa
gaagaagaagagtggagcgctgaaggttactggagagcctgttaccgagcgtggagcgac
tactatgcgtccatgtctcctttccaacagcgaggtcatcacagctactacagcggcgct
cacagctggatggcagcgtatcgaatgaactccgtgtacgtggaagaactcatgaagcac
tga
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