Solea solea (common sole): 131468547
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Entry
131468547 CDS
T10853
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03013
Nucleocytoplasmic transport
ssoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131468547 (ddx19a)
03015 mRNA surveillance pathway
131468547 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131468547 (ddx19a)
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131468547 (ddx19a)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131468547 (ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
131468547
NCBI-ProteinID:
XP_058498914
LinkDB
All DBs
Position
11:8676015..8682365
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AA seq
487 aa
AA seq
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MSQNSWAQAVDVQETTALSVQLDSSKKVQGLYGGRYKRGDVNANIVLEKKENGGRTKDSD
SVDPAEQSLLYKLIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNMGF
NRPSRIQENALPMMLAQPPQNLIAQAQSGTGKTAAFSLAMLSHVDPANKWTQCLCIAPTY
ELALQIGHVIEQMGKFYPDVQLAYAIRGNRMERGIKLQQQIVIGTPGTVLDWCTKFKHID
PKKITMFVLDEADVMIATQGHRDQSFRIHRQLPKDCQMLLFSATFEDSVWKFAEKVVPDP
NIIKLKREEETLDTIKQFYVVCKQEEDKFIALCNLYGCLTIAQAMIFCHTRRMAAWLAAN
LTQEGHQVALLSGEMTVEQRAAVIERFRDGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DINGNAHNETYLHRIGRTGRFGRKGFAVNMVDSEHSMDIIHQIEMHFNRKIIEIDTSNLE
EMEKLFS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaactcgtgggcgcaggctgtcgatgtccaggagaccacagctctatcagtg
cagttggactcttccaaaaaagtacagggtttgtatggaggacgttacaagagaggagac
gtaaacgcgaacattgtcctggagaaaaaagaaaatggaggcaggaccaaagacagcgat
tcggtggacccggctgaacaatccctgctatacaaactgatccgccgctctctggtgcgg
aacagaaaccaggtggaggtccttcagagggacccaacctcccctctctactcggtcaag
acgtttgaggagctgagactgaaacctgagctgttgaagggtgtgtacaacatgggcttt
aacagaccgtccagaatccaggagaatgcattgcccatgatgctggcacagccacctcag
aatctgattgcacaggctcagtccggcacaggtaaaactgctgcgttttctctggccatg
ctcagtcatgtagacccagccaataagtggactcagtgcctgtgcattgcaccaacatat
gagctcgcgctgcagatcggtcatgtcatcgagcaaatgggaaaattttatccagacgtg
caacttgcatatgccattcgtggcaacagaatggagcgaggcatcaagctacaacagcag
attgtcattggaacaccaggcacagtcctcgactggtgcaccaagttcaagcacatcgac
cccaagaagatcaccatgtttgtgctggacgaagcggatgtgatgattgccacgcagggt
catcgtgaccagagctttcgaatccatagacagctaccaaaggactgccaaatgctcttg
ttctctgcaacatttgaggactctgtgtggaagtttgcagagaaagtggttccagaccca
aatatcatcaagctgaaacgtgaagaggagacgctggacacaatcaaacagttctacgtg
gtctgcaagcaggaggaggacaagttcattgctctttgcaatctctacggatgtcttacc
attgcacaggcaatgatcttctgccacactcgcaggatggctgcttggctagctgcaaac
ctgactcaagagggccaccaggtggcattgctgagtggagaaatgaccgtggagcaaaga
gctgctgtcattgaacgcttccgtgatggcaaggagaaggtgctcgttaccacgaatgtg
tgctctagaggtattgatgttgagcaggtgtcacttgtggtcaactttgacctgccggtg
gacattaatggaaatgcccacaatgagacataccttcaccggattggccggactggacgc
tttggcagaaaaggatttgctgtcaacatggttgacagtgaacacagcatggacatcatc
caccagattgagatgcatttcaacaggaaaatcatagaaattgacaccagcaatcttgaa
gaaatggaaaagctgttcagttga
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