Solea solea (common sole): 131468631
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Entry
131468631 CDS
T10853
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131468631 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131468631 (mbd4)
03400 DNA repair and recombination proteins [BR:
ssoe03400
]
131468631 (mbd4)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
131468631 (mbd4)
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
131468631 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
131468631
NCBI-ProteinID:
XP_058499099
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All DBs
Position
11:3189766..3194104
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AA seq
472 aa
AA seq
DB search
MHPIDSDVIQLETSGDRNNQSKEDKEDLCHINTTMPTGWIREVRQRRGGKTAGKLDVYIT
SPQGQRFRSRSSLHAFLLKNVEDNLDISLFSFTASKDDVTAASQMLPTQIRKGRTKKKRA
NKQEETTENLDPPPNESTRASSSRRRTPEADVKSADDTNHVSDVFPEETDKTMESCVQDA
VVQDDVILQRSHQRAGLRGKLLQTTPSVKRKPTSTDHEDKQGDAQSSIPTLNVHPATDSD
SEGERGEKMKNVHSKGGDEPNSEQETDADSRINVEDKVLLPDVPVNSCTPVRDTQNRPKS
LDDKRKTSPYFSGKLSNDGLSPPRRKVFKKWTPPRSPFNLVQETLFHDPWKLLVATIFLN
RTTGKVAIPVLWQFFDQYSSAELTREADWKPISELMQPLGLYELRAKTLIRFSDEYLTKQ
WRYPIELHGIGKYGNDSYRIFCVGEWRDVTPEDHMLNKYHAWLWENHETLGI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccatagacagtgacgtcatccagctggagaccagtggagacagaaacaaccaa
agtaaagaagacaaagaggatttgtgccacattaacaccacgatgcccaccggctggatc
agagaggttcggcagaggcgaggaggcaagacagcaggcaaactggacgtgtatattaca
agtcctcaagggcagaggttccggtcaaggtcatccctgcacgctttcctcctcaaaaat
gtagaagacaacttggacataagcctcttcagtttcaccgcatccaaggatgatgtcacc
gcagcgtcacaaatgcttcccacccaaatcagaaaggggagaacaaagaaaaagcgtgct
aataaacaagaggagacgacagaaaacctggatccacctccaaatgaatctacaagagcc
tcttcctcccgcagaagaactccagaagcagatgtaaagagtgcagatgatactaatcat
gtcagtgatgtttttccagaggaaactgataagactatggagtcctgtgtacaagatgca
gtcgtgcaggatgacgtgatactgcagaggagtcatcagagagccgggctgagaggaaaa
cttctacaaacgactccatctgtcaaacgaaaacccacttccactgatcacgaggacaaa
cagggagacgcacagtcgtctattcctactctgaatgttcaccccgccactgacagtgac
agcgagggtgaacgaggtgaaaaaatgaaaaatgttcacagcaaaggtggcgacgagcct
aattctgaacaggagaccgacgccgacagtcgtataaatgtggaagacaaggtgttgtta
cctgacgtccctgtgaacagctgcacgccagtgagagacactcaaaataggcccaagagc
ttggatgacaaacggaaaacgagcccttatttcagtgggaaactctcaaacgatggactt
agccctcccaggagaaaggtcttcaagaagtggacgcccccccgttctccctttaatctg
gtacaagaaacactcttccatgacccgtggaagctcctggttgccacaattttcctaaac
cggaccactggtaaagttgccattccagtgctgtggcagtttttcgaccagtactcgtct
gcagaactgacccgtgaggccgactggaagcccatatctgaactcatgcaaccacttggc
ctctatgagctcagagccaaaacactcatccgcttctcagatgaatatctaactaaacag
tggcgttaccccatcgagctgcacgggattgggaaatacggcaatgactcctataggatc
ttctgtgtgggagagtggagagatgtgacccccgaggatcacatgttaaacaaatatcac
gcctggctgtgggagaaccacgaaactcttggaatctga
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