Solea solea (common sole): 131468748
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Entry
131468748 CDS
T10853
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssoe01009
]
131468748 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131468748 (hdac6)
04131 Membrane trafficking [BR:
ssoe04131
]
131468748 (hdac6)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131468748 (hdac6)
Enzymes [BR:
ssoe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
131468748 (hdac6)
Protein phosphatases and associated proteins [BR:
ssoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131468748 (hdac6)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
131468748 (hdac6)
Membrane trafficking [BR:
ssoe04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131468748 (hdac6)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
131468748 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
131468748
NCBI-ProteinID:
XP_058499299
LinkDB
All DBs
Position
11:complement(24571958..24582349)
Genome browser
AA seq
1097 aa
AA seq
DB search
MQSGPDHPGSGLKSVRRSPRLSPESSAGRGKELRKGGSSLQEVKRKGRMERNRDEELNNS
LKKLDLSCRSAVGGTGLVFSDIFTHHKNLWEPSHVESPDRVTSIMKELQTQELLSLCVTV
KPREATEQELLLVHTKQYVDVMRSTQTMSESELHTLSDKYDSVYLHPESFQVCVLAVGSV
LQLVDQVMTSELRNGFAVIRPPGHHAQTSEANGYCIFNNVAIAARYAQNTHSVKRVLIVD
WDVHHGQGIQYEFQDDPSVLYFSVHRYEQASFWPHLPESAGGFVGSGQGEGRTMNVAWDK
TQMKDADYITAFQQLLLPVAYEFQPQLVLVSAGFDATVGDEKGQMCVTPQCFHVLTHMLM
SLAEGRLVLALEGGYNLQSTAEGAAACVRALLGGACPPLTPPTAPSFSALKSISESVSAL
CPHWTCLQLLEGVPLADMVVIRATTNDESFQHSGSASSVATTTGLVYDERMMEHLNMWDR
HHPEQPQRIAHIYARHQALGLVHRCTRIPARLATEEELTMCHSERLVQLISSSSLMKSRD
LHRLSEEFNSIFINNQSFSCAQLAVGGCFAAVDAIMSGEVSNGTAIVRPPGHHAETDSAC
GFCFFNTAALAARHAQKISHPAPLRVLILDWDVHHGNGTQHMFEDDDSVLYISLHRYDNG
TFFPSSEDAAPNQVGVGKGLGFNVNVAWSGGRMSDSDYLAAFHHVVMPIATEFNPALVLV
SAGFDAARGDPLGGYHVTPQGYAHLTHLLMSLAGGRVLLILEGGYNLTSISDSMAMCTSV
LLGDTPPALVTPLPPPHHSAVAVINEVIRHHAPYWRSLRINIPASVRASLPTPKHHGRRS
SKGKSRKSEQSKEDKCPASQRGRGDMEEVDTLDQLAQGLASLDISLSSANHSPATSTPVG
GARAKVHLIQEEVICEGERKAESSEGKCDQSQSECQTQMVAATPDSVTVGDETTGGMGAE
PEVEGACGWSKPQMSLELACGGQSPLYVVDPLPWCPHLDAVKPLPPSGINILLPCQDCDS
VAENWICLTCYQVFCGRYVNEHMLTHGCVSEHPLVLSFSDLSAWCYLCESYVHHQILFEA
KNSAHLAKFGEEVPPWS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggaccagatcatccaggatctggactgaagtctgtcaggagatctcctcgt
ctgtctcctgagagcagcgctggtcgaggaaaggagttgaggaaaggaggcagcagcctg
caggaggtgaagaggaaaggaaggatggaaaggaaccgagatgaggagctgaacaacagt
ctgaagaaactggacctgtcctgcagatcagctgttggtgggacaggccttgtcttctct
gacatcttcactcatcacaagaacctatgggagcccagtcatgtggagagtccagacaga
gtgacgtccatcatgaaggagctgcagactcaggagcttctgtctctctgtgtcacagtg
aagcccagagaagctacagaacaagagctgctcctcgtccacacgaaacagtatgtggac
gtgatgaggtcgactcagacgatgtcagagagtgaactacacacactgtctgacaaatat
gactccgtgtatctgcatcctgagtccttccaggtgtgtgtgttggctgtaggttcagtc
ctccagctggtcgatcaggtgatgacctctgaactcagaaatggatttgctgtcatcaga
cctccaggtcaccacgctcagaccagcgaggcaaacggctactgcatcttcaacaacgtg
gcgatcgctgcgcgatatgctcagaacacacactctgttaaaagagtgttgatagtggac
tgggacgtccatcatggtcaggggatccagtacgagttccaggacgaccccagtgtcctg
tacttcagtgtccacaggtacgagcaggcgtctttctggcctcacctgccggagtctgct
ggtgggtttgtgggcagtggacaaggcgaggggcggaccatgaacgtggcctgggacaag
acgcagatgaaagatgctgattacatcactgcttttcaacaactgctgttgcctgtagcc
tacgagtttcagcctcagctggttctggtctctgctggatttgatgctactgttggagac
gagaaggggcagatgtgtgtgactcctcagtgtttccatgttctcactcacatgttgatg
agtttggctgaaggccgacttgttctcgctctcgagggaggttataacctgcagtccaca
gcagagggcgctgctgcctgtgtcagagctctgctgggaggagcctgtcctcctctgact
ccgcccacggctccatctttcagtgcactgaagtccatcagtgagagtgtctctgctttg
tgtccacactggacatgtttgcagctgctggaaggcgtcccattggctgatatggtcgtc
atcagagcaacaaccaatgacgagagctttcagcacagtggctccgcctcctctgttgcc
acgacgacaggactggtttacgacgagcgtatgatggagcacctgaacatgtgggacaga
catcatccagagcagccgcagagaatcgcccacatctacgccagacaccaggcgctcgga
ctggtccaccgctgcacacgcatcccagcacgcctcgcgacggaggaggagctcaccatg
tgtcacagtgagcgtctggtccagttgatcagctcctcttcactgatgaagagcagagat
cttcacagactcagtgaagagtttaactccatcttcatcaacaaccagagcttcagttgt
gctcagctcgctgtgggaggctgcttcgccgccgtggacgccatcatgagtggagaggtg
agtaacggcacggcgattgtccggccccccggtcatcacgcagagacagactccgcctgt
ggattctgcttcttcaacacagcagccctcgctgctcgccacgcccagaaaatctcccat
cctgcaccactccgagtcctcatcctcgactgggacgttcaccacggcaacgggacacag
cacatgtttgaggacgatgacagtgtcctgtacatctccctccatcgctatgacaacggg
acgttcttcccgtcctctgaagacgccgcccccaaccaggtgggtgtgggaaaagggttg
ggcttcaacgtgaatgtggcgtggagtggaggacggatgagcgactctgattacctcgct
gcttttcatcatgtggtcatgccgatcgccaccgagtttaaccccgccctcgttctggtg
tcagccggctttgatgcggctcgtggtgatcctctgggtggatatcatgtgacccctcag
ggatacgcccacctcacacacctgctgatgtcattggctggggggcgtgtcctgctcatc
ctggagggaggttacaacttgacctccatctctgactccatggcgatgtgtaccagcgtg
ttgctaggagacacgcccccagccctggttacgcccctcccccctcctcatcacagcgcc
gtggcagtgatcaacgaggtcatccgacaccacgccccctactggaggtcactgaggatc
aacatcccagcgtctgtgcgggcgtctctgcccaccccaaagcatcatgggagacgtagt
tctaaaggaaaaagcaggaaatctgagcagagtaaagaagacaagtgtccagcatcccaa
cgaggacgaggggacatggaggaagtggacacgctggaccaacttgctcagggattggcc
agtttggacatcagtctgtcctcagccaatcacagtcctgctacgtccacaccagtaggt
ggggccagagcgaaggtccacctgatacaggaggaggtcatctgtgaaggtgaacggaag
gcggagtctagtgagggcaaatgtgatcagagccaatcagagtgtcagacgcagatggtc
gccgcgacaccagactcggtcaccgttggagacgagactactggtggaatgggggcagag
ccagaggtagagggagcatgcggttggtcaaaacctcagatgtctctggagttggcttgt
ggaggacagtctcctctgtacgtggtcgaccccctcccctggtgtcctcacctggatgca
gttaagcccctcccaccctcaggtataaacatcctcctgccgtgtcaggactgtgactct
gtggctgagaactggatctgtctcacctgctaccaggtgttctgtggccgctacgttaac
gagcacatgctaactcatggttgtgtgagtgaacaccctctggtgctgagcttctctgac
ctgtctgcgtggtgttacctgtgtgagtcgtacgtccaccaccagattctgtttgaagct
aaaaactctgctcacctcgcaaagtttggagaggaggttcctccgtggagctga
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