Solea solea (common sole): 131469548
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Entry
131469548 CDS
T10853
Symbol
bmal1a
Name
(RefSeq) basic helix-loop-helix ARNT like 1a
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131469548 (bmal1a)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
131469548 (bmal1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
bHLH_IRO3
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_SAC51
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
131469548
NCBI-ProteinID:
XP_058500591
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All DBs
Position
12:2210582..2224472
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AA seq
641 aa
AA seq
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MEGDDFNTEAVMNICDDLMADQRMDISSTMTDFMSPNSTELISSSISSSSTTAMDFTRKR
KGSSTDYQIDGFSFDDMDPDKDKLGSDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASL
VPTCNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGF
LFVVGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER
LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS
FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPSLADIRVKAT
EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIAHLAECHRQVLQMREK
INTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCPMMEGSDYPQSAASP
QSMDSVLTSEGGGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSP
LNITSTPPPDTCSPGGKKIQNGGTPELPSTGIIPGPDSVGYPYSNQSIMSDNSHLSIDIM
DEPGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagatgatttcaacacagaggcagtgatgaacatctgtgatgacctgatggct
gaccagaggatggacatctcttctaccatgactgacttcatgtctccaaactccactgag
ctgatctcctcgtccatcagcagcagcagcaccacggccatggacttcaccaggaagagg
aagggcagctccactgactaccagattgatggattctcttttgatgacatggatccagac
aaagacaaactgggcagtgaccaacagggccggatcaagaacgccagagaggctcacagt
cagatcgagaaacggcgtcgggacaagatgaacagcttcatcgacgagctggcgtcgctg
gtgcccacctgcaacgccatgtcccggaaactggacaaactgacggtgctgcgtatggca
gtgcagcacatgaagacgctccgaggagcagctaatccgtacactgaggccaactacaaa
ccttccttcctgtcagacgatgaactcaagcacctgatactgagggctgctgatggcttc
ctgtttgtggttggatgtgaccgtggaaaaattctctttgtctctgaatccgtctacaag
atcctcaactacagccagaacgacctgattggccagagcctttttgactaccttcacccc
aaggacatcgccaaggtcaaagagcagctgtcctcctccgacacggcgccccgcgagagg
ctcattgacgctaaaactggtcttccagtgaagacagacatcaccccgggtccgtctcgt
ctctgttctggagccagacgctcgtttttctgcaggatgaagtgcaacagaccttcagtc
aaagtagaagacaaagactttccctccacctgctcaaagaagaaagctgaccgtaagagc
ttctgcaccatccacagcacaggttacctgaagagttggcctcccactaaaatgggtctg
gacgaggacaacgagcctgataacgaaggctgtaacctgagctgcctggtggccattggc
cgcctgcacccccacatcgtcccccagcccagcctggccgacatcagggtcaaagctacc
gagtatgtgtcccgacacgccatcgacggcaagttcgtctttgtggaccagagagccaca
gccatcctggcctacctgcctcaggagctgctgggaacgtccttctatgagtatttccac
caggacgacatcgctcacctggctgagtgtcacagacaagtgctgcagatgagagagaag
atcaacaccaactgttacaagttcaagattaaagacggttccttcatcacactgaggagc
cgctggttcagcttcatgaacccgtggaccaaagaggtggagtacatcgtctccaccaac
actgtggtgtcgtgtccaatgatggaaggatcagattatcctcaatctgctgcttcacct
cagagcatggacagtgttctcacctcagagggtggtgggaggcgggctctgcagacggtg
ccaggaatcccgggcggcacgagagcgggagccgggaagatcggacgcatgatcgcggag
gaggtgatggagatccagaggatcagaggctcctccccctccagttgtggctccagtcct
ctgaacatcaccagcacacctccacctgacacctgctcaccagggggcaaaaagattcag
aatggaggaacacctgagctgccgagcactggaatcatccctggacctgattctgttgga
tatccgtactcaaaccagtccatcatgagtgataactctcacctgagcatcgacattatg
gacgagcctggctccagcagcccgagcaacgacgaggcggccatggccgtcatcatgtct
ctgctggaggccgacgccggcctcgggggccccgtcgacttcagtgacctgccctggcct
ttgtga
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