Solea solea (common sole): 131469576
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Entry
131469576 CDS
T10853
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe02010
ABC transporters
ssoe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131469576 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
131469576 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssoe02000
]
131469576 (cftr)
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
131469576 (cftr)
Transporters [BR:
ssoe02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
131469576 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
DUF87
MMR_HSR1
AAA_16
nSTAND3
T2SSE
NB-ARC
Zeta_toxin
FtsK_SpoIIIE
Dynamin_N
nSTAND1
Motif
Other DBs
NCBI-GeneID:
131469576
NCBI-ProteinID:
XP_058500678
LinkDB
All DBs
Position
12:22912206..22945610
Genome browser
AA seq
1511 aa
AA seq
DB search
MQKSPVEDANFFSKFFFWWMSPLLRKGFRKKLDLSDVYKAPSFDLADNLSERLEREWDRE
VVSAKIKPRLMRALARCFFGPFAFFGILLYLGEASKAVQPQLLGRIIASFDPFHAPERGQ
GYYLALGLTLLFTVRFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWISPLQCILCVGLLWELIEVNGFCALAALTLLGILQAW
LSQKMQPHRVKRAGMITRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKI
GSLRYFYSAAYFFSAILVIVSAVVPHALSNGIILRRIFTTASYCMVLRMTMTRQLPGSIQ
MWYDTLALISKIEDYLMKEEYRELEYNLTTSEVELVNVSASWDEGIGELFEKIKQESKAN
GHPNGDAGLFFTNLYVTPVLRNISLYLEKGKMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTAWIMPGTIRDNILFGLTYDEYRYTSIIKACQLEEDFSLLPEQDKTLL
GEGGVTLSGGQRARLGLARAVYKDADLYLLDAPFTHLDIVTEKEIFEKCVCKLMASKSRI
VVTSKLDHLKRADKILLLHNGDCYFYGTFSELQAQRPDFSSLLLGLEAYDNVNAERRSSI
LTETLRRVSIDETAGFRPEPMRQSFRQPPPPIIVSGPQSHPVSDGYPEKRKQSLILSPLA
AARKFSFIGNSQHTSNTPQSTTIEDGVRELSERKFSVVPEDEQVEEVLPRSNLYHHGLQH
LNGQRRQSVLAFITNAQGQERREQMQSSFRRKLSIAPQCDLASELDIYARRLSKDSVYDI
SEEVDEEDMEQCFADERENVFETTSWSTYLRYITTNRSLVYVLIFIVIVFVLEVAGSVIG
IFLITDEIWRDSANPSSPNYISEQHPNASAPPVHLAVIVTPTSAYYIVYIFVATSESILA
LGIFRGLPLVHTLLTVSKRLHEQMLGAVLRAPMAVLNTMKSGRIMNRFTKDMTTIDDMLP
LVLFDLIQLTLIVIGAIFTVSIMRPYIFIAAFPLAALFVFLRKYFLRTGQQLKLLEAEAR
SPIFSHLIISLKGLWTIRAFGRQTYFEMLFHKALNTHTATWFHYLATLRWFLFRCDMIFV
LFFSAAAFIAVGTNQDKPGEIGIIVALAMLILGTFQWAVITSITVDGLMRSVERVFKFID
LPSEEPRPPKSSGKGGPDLVIDNPHARDYWPNRGQMDVQDLTVKYTEAGRAVLGNISFSV
DGGQSVGLLGRTGSGKSSLFSALLRLASTEGEISIDGVSWSSVSLHTWRKAFGVVPQKVF
ILSGTFRMNLDPHGRYSDEELWRVVDEVGLKTVIEQFPDKLDFQLEDRGSVLSNGHKQLL
CLARSILSKARILLLDEPSAYLDPITLKVLRKTLKQSFSDCTVILSEHRVEPLLECQSFL
MIENSSMKTYDSIHKLLNETSHLKQAMSPTDRLHLFPNLHRLNSGKRAPPQATKISSLPE
EAEDEVQDTRL
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcacctgtggaagatgcaaacttcttctccaagtttttcttctggtggatg
tcaccgctgttgaggaaaggcttcagaaagaagttggatctgtcagatgtgtacaaggct
ccttcatttgatttggcagacaacctctctgagagactcgaaagagaatgggacagggag
gtggtgtcagccaagatcaagccccggctgatgcgagcactggcccgttgcttctttggc
cctttcgccttctttggtatcctcctctacctcggggaggcttccaaggcggtgcagcca
cagcttttgggtcgtatcattgcatcatttgacccgttccatgctccagagcggggccag
ggttattacctggcactgggactaaccctgctcttcactgttcgcttcctcctactgcag
cctgccatctttggtctgcaccacctgggtatgcagatccgcatcgccctcttcagtctt
atatacaaaaagaccctgaagttatccagccgtgtcttggacaaaatcagcaccggtcag
ctggtcagtttgatgtccgcccatctcaacaagctggatgagagcttgggtctggcccac
tttgtgtggatcagccctctgcagtgtatactgtgtgtgggtctgttatgggaactgatc
gaggtgaacggcttctgtgctttggcagctctgaccctgctgggcatcctccaggcctgg
ctctcacagaagatgcaacctcaccgggtgaagagggcaggaatgatcacccgccgcctg
gctctcacctctgagattgtggagaacatccactctgtgaaggcgtatggctgggaggaa
gtgatggagaccatcatcaagaacatcaggcaggatgagatgacgctgacgaggaagatt
ggttctctgcgctacttttacagtgccgcatacttcttctctgccatcttggtcattgtg
tcagccgttgtgccccatgcactgagtaacggtatcatcctgcgtcgaatcttcaccaca
gcgtcatactgcatggttctgcgaatgacaatgacccgccagctgccgggttccatccag
atgtggtatgacaccctggcactgatcagcaagattgaggattacttgatgaaggaggag
tacagagagctggaatacaatcttaccacaagtgaagtggaactggtcaacgtgtctgca
tcatgggatgagggaattggtgagctgttcgagaagataaagcaagagagcaaagcaaat
ggacaccctaatggcgatgccggcctcttcttcaccaacctctacgtcacacctgtcctc
agaaacattagcctttacctggagaaggggaagatgctggcagtggctggatccactggc
tcaggaaaaagttccttgctcatgatgatccttggagagctggtgccatcagagggtaaa
attagacacagtgggcgaatctctttctcaccacagactgcctggatcatgccagggacg
attcgtgacaacatcctgtttggtctgacctatgacgagtatcgctacacttctatcatc
aaggcctgtcaactggaagaggacttttctttgctgcctgagcaagacaaaacactcctt
ggcgaaggcggggtaaccctgagtggtggtcagagggctcgcctcggcctggccagagct
gtgtataaagacgccgacctctacctgctggatgcgcctttcacccacctggacattgtg
acagagaaagagatctttgagaaatgtgtctgtaaacttatggcctccaaaagtcgtatt
gtggtcaccagcaagttggaccatctcaaacgtgcagacaaaatccttctgctgcacaat
ggtgactgctacttctacggcaccttctcagagctgcaggcgcagcgaccggacttcagc
tccctccttcttggcctagaagcttatgacaacgtaaatgcagagcgacgcagctccatt
cttacagagacactccgcagggtttccattgacgaaaccgccggcttcagaccagaacca
atgcgacagtcattccgccagccaccacctccaataattgtttctggacctcaaagccat
cctgtaagtgatggctacccagaaaaacgcaaacagtcgctcatcctcagtcccctggca
gctgcccgcaagttctccttcattggaaactcacaacatacttcaaacacaccccagtcc
acaacgatagaggacggggttcgggaactctcagagagaaaattttctgtcgtaccggag
gatgaacaagtggaggaggtcctccccaggtcgaacctgtaccaccatgggttgcagcat
ctcaatgggcagaggcggcagtctgtcctggcattcatcaccaacgctcagggtcaagag
cggcgagagcagatgcagtcgtccttcagaaggaagctctccatcgctcctcagtgcgat
ctggcatctgagctggacatttacgcccggcgattatccaaggacagtgtttatgacata
agtgaggaagtggatgaagaagacatggagcaatgcttcgcagacgaacgtgaaaacgtc
tttgaaactacctcatggagcacatacctgcgctacatcaccaccaatagaagcttagtc
tacgtcctcattttcatcgtcatagtcttcgttcttgaggttgctggttcagtcattggc
atcttcctcattactgacgagatctggagggatagcgccaacccatcatcacctaactac
atcagtgagcagcaccctaatgcctcggcgccccctgtccacctggcagtcattgtcaca
ccaaccagtgcttactacatcgtttacatctttgtagccacatcggagagtatacttgcc
ctgggaattttcaggggtctcccattagtacacacattactcactgtgtccaaaagactg
cacgagcagatgctgggcgcggtgctgcgtgctcccatggctgtgctcaacactatgaaa
tcaggtcgcatcatgaatagattcaccaaggacatgaccaccatagatgacatgctgcct
ctggtgctctttgacctcatacagctgacattgattgttataggcgccatcttcaccgtg
tccatcatgcggccgtacatcttcatcgctgccttcccattggctgctttgtttgtattc
ctcaggaagtacttcttacgaactggacagcaactcaaactgctggaggctgaagctcgt
agccccatcttttcccacctcatcatctccctgaagggcttatggaccattcgggcgttt
gggcgccagacctactttgaaatgctcttccacaaagcactgaacactcacacagcaacc
tggttccactacctcgcaacgctgcggtggttcctgttccgctgtgacatgatcttcgtc
ctgtttttcagcgcggctgctttcattgcagtgggaacaaaccaggacaaaccaggtgag
attggcatcatcgtggccctggccatgctcatcctcgggactttccaatgggctgtcatc
accagcatcactgtcgatggactgatgcgttcagttgaacgagtcttcaaattcatcgac
ctgccgtcagaagagccacggccgcctaaatctagtggtaaaggaggccccgacctcgtc
atcgacaaccctcacgctcgtgactactggcccaaccggggccagatggacgtccaagac
ctcactgtcaaatacacagaggctggacgcgctgtcctcggcaacatctccttctctgtg
gacggagggcagagtgtgggtctgctgggtcgaacaggttcaggaaagagcagtctgttc
tctgcgctgctgcgtctcgcctccactgaaggagagatctccattgatggtgtttcgtgg
tcctcagtgtccctgcacacttggaggaaggcctttggtgtcgtgccccagaaagttttc
attttgagtggaactttccggatgaacctggacccacatggtcgttacagcgacgaggag
ctgtggagggtggtggacgaggtgggtctcaagacagtgatcgagcagtttccagacaag
ctggactttcagctggaggacagaggcagcgtgttaagcaatggacacaaacagctgctg
tgtctcgcacgctccatcctcagcaaagctcgaatcctgctgctggacgaaccctccgcc
tacctcgaccccataacattaaaggtcctgaggaagacgctgaagcagtcgttctccgac
tgcaccgtcatcctctcagaacacagagtagagccgctgctcgagtgtcaatcgttcctg
atgatcgagaacagctccatgaaaacctacgactccatccataaacttctgaatgagacc
agtcacctgaagcaggccatgagtcccaccgacaggctccacctcttcccaaacctccac
cgcctcaactccggcaagagggcgcctccacaggccaccaagatctcgtctctgccagag
gaggcagaggatgaagtccaagacactcgtctctaa
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integrated database retrieval system
