Solea solea (common sole): 131469771 Help Entry 131469771         CDS       T10853                                  Symbol spg11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism ssoe  Solea solea (common sole) Brite DNA repair and recombination proteins [BR:ssoe03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      131469771 (spg11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  131469771 NCBI-ProteinID:  XP_058501069 LinkDB All DBs Position 12:complement(28549320..28572565) Genome browser AA seq 2416 aa AA seqDB search MLESLQRPQSSVTVVAVIPGNQRGAAVADIRRAELAPGSGSVLGCVLGLRGGGGGGRLVV WDAADREAPPAAVDDSCSDFSWEEVSSSSSISSSISSSISSSSSSSFRLVAVGCECDLKL LQVTVQRSACVSVLCVSHCPADELLQTLPEQDDGEELRSLRVLSFAAGRCRALLNDRWLL QLQWRRQEEAEPQTLTWRRLGASGDGEGRAAVHHCLCRDFLFTLSSSGLICVYDITDGCL LASVDLPAYLSSVPVDEDDVFPSSSSFCVLQVSADLSTAVAVTQTHAAVAVDLDLYFRMF PQHLLCAAPPAGPPLHAQQPGDQDRLLSSSCSLAALGSTFSPDRSWESRLASMYSRAQQA PAASPSSWTSWSTSLPHLESHQAPSSARSRIPCGFTTVTFSVPESSSPTLLSVSEFSALL TFVSPGNKQTTVASWDLESGSVSYHQVEGVAAPVQRCGERQHRLLLTNEGVLQVLFSVSQ QDLLSRLMLFGSAATVDAVCHLNSWGRCSIPVHALQAGLKNRQLDTVDFFLKSKENLLDL MTGFGAVDQVSTPSLTQSVQQLCPALDVLCSSVRDSNSEAQSRQFSEQLLNVTLNFVNTQ IRSVLSASQHEDAGVRSCVDILDRYLTELRSYMKRFPWPTGSDASTPAEDEDEDKDKDED VDEAPKDEWEQLQTEELVRRSILTNQIPRAQAALRRRSRPEQGLTALRTEGLRQVFSCLR QRDLQTTNTLLTNMGFSVKKQLHSICLYTDDKGLREFVVEELCRRSYFPEEEMQSVEFIR HMEKLGSLARSCCPADTSCHRVVHMETGLDDQVLEDLVGHRRSDEEPMLWQNLRLDWVRN WDQSCQTAVLLSRLEHTEVSSCEPAALWRYLTAFHDRHRVVTWIQNQDTGGGAPLWPELA AELVNSNTLCSTYMREMILDLLARRGHFIPDELADLEKLLWRLGQGGGAMASSPPVPHHR SSHGLDLHGLFITFCLERGLQFLLYTYLEHYRLTPRNCPLLTSPGLCESQPWFEMLVKIQ EITTDLSDPGVVYQASLTSAQVLLPGSQASLSSLLLEGHSSLALAAIMFSPGGIDQVMLQ GERSGRSGRSGRSGRTVDPQLLKMALAPHSKLKAALFPSGPRGHGSSSDVSVYHVLQCLR PLDVSRLFGWQTANTLNSTETSELPHFSSPHLVNRFALVENLDFLYYLRHGRPSFAYATF LVQQLSSCSDVTLLRRRVQQQVYTLALRCFNVASVASASVCFCELLGVCSLKLRVDVRVM NLILQHWNQQHTHSDPTQRLHTLGVKLAEAEPGAAEKLIGCLEAAVADTLEQKDVHRSSY EASQEWALPVQFCLLHSLPLSSVYPAHCADDGQFVHFLLFVQLHSFPPQQVRSLVARFGP ALQAHLSLAFQDLQVPLKTENWSGSRVQSSELFHVLLQSQEQASPCSFLLHEAVAQYCPT LAVLAACHQGAELLSCLCVWVLTSVDDVTVAEATSHLLEAPQHHEWNLHDLSIIWRTLLE RGLIQPLLRGFELFLRDCPLVLVLRMFELCCDYRNFSEAKEKLLDFQRTLITLRSSGPVS SSDLPLQWVESQASVLLLTMLQCCSSQYDLHRLLQLLADVDKLLKSNGPDFRKLSQLSQL LQGSEVSLSPRLLQCTSPSVQQEEFQAAVDALQARGRYSQARQVAQLAGLPVQHLLLNQL LQEVNSQKSKPQWRRLETRVSFWKKCQEQLKTDGTDPRQASQFFLSQAKAPGVDTQTELP DVQERCLLLGIAAHWLSLLAPPPVDELESLEKTLWRNQVRRQVLTAAMEKESVFNLPPPS VTSEMNTYEVLMREFSFSNISALNTERFLSVEGLPTPCEEHQQQEQEEVNDGSGLSPEER RVLSTLIGRLLDDGSVHEASRVCRYFSLYHSDVWVVLRCRGLASGELLPRPPEEASEPVL RSSIASSSSFSSLSLAMFPLPEDDDVVVELQRLLDQCRHGNNYCKQVLSLYQLSKELQSS FSQVCREEPRSVLEMLLLSDQPERFRKAQAFIRAQGLSADTVAQLVSSAVARALLASSTQ DLQPERQVFRQSEGRDSLIQLIKLCDDPNLVGIKLMENINTVPLRDLSCIVELLIAAHDC FSLTCNMEGIVRVLQGARHLSHAYLAPGEHYSLLVRLLTGIGRYNEMTYVFDLLHQNHRF EMLLRKKVDMDRGQCSSLKTSLLDYIKRCLPADSEKHNMVALCFSMRREIGENHEMAART QLKIIEAQPWVVTPDLESSLVKVLGLLKDAAESFSKDSCLRQATRCVRTAKLVALQLHFL RQELDVRVINLRPAELLNTIVALPRCYQVFVVSEAYGYSPDWAEILYEKVVVKGDFVYLE ELKRHRPLTSGLFEDIFKKLDAAPSSVTPNVKRLLTHCDDVYSRYRLAYQQNLNDVAETL LQDAKTSNYLNDRLAS NT seq 7251 nt NT seq  +upstreamnt  +downstreamnt atgttggagtcgcttcagcggccgcagagcagcgtcacagtggtggctgtaatcccgggg aaccagcgcggtgccgcggtcgcggacatccgcagagcggagctcgctcccggcagcggc tccgtgctcggctgcgtgctggggctccggggcggcggcggcggcggccggttggtggtg tgggacgcggcggacagagaggcgcctccggcagcggtggacgacagctgctcagatttt tcctgggaggaggtgagcagcagcagcagcatcagcagcagcatcagcagcagcatcagc agcagcagcagcagcagcttcaggctggtggctgtaggatgcgagtgtgacctgaagctg ctgcaggtgacagtgcagcggtcggcgtgcgtctccgtcctctgtgtctctcactgtcct gcagacgagctgctgcagacgctcccagagcaggacgacggtgaggagctgcggtcgctg cgcgtgttgtcgttcgccgccggccggtgccgcgcgctgctgaacgaccgctggctgctg cagctgcagtggcggcggcaggaggaggcggagccacagacgttgacctggcgccgcctc ggggcgtcgggggatggcgagggacgtgccgccgtccatcactgcctctgcagagacttc ctgttcaccctcagctcctctggactcatatgcgtgtatgacatcactgacggctgtttg ctggcgagcgtcgacctccctgcttacctgagctctgtcccggtggacgaggacgacgtc ttcccgtcgtcgtcgtccttctgcgtcctgcaggtgtcagctgatctcagcacggccgtc gctgtcactcaaactcacgccgccgtcgctgtcgacctcgacctttacttcagaatgttt ccacagcacctgctgtgtgcagcgccccctgctgggccccctctgcatgcacagcagccg ggagaccaggaccgcctgctgagctccagctgcagcctcgccgccctcggctccaccttc agtcccgaccgctcctgggaatctcgtttggcgtccatgtacagcagagcccagcaggct ccagctgcctccccctcctcctggacgtcttggtccacctccctcccccacctggagtcc caccaggctccgtcctcggcccgcagcagaatcccctgcggcttcacgaccgtgactttc tccgtccccgagtcgtcttcgccgacgctgctctccgtctccgagttttccgccctgctc accttcgtctcccccggcaacaagcagaccacagtggcctcatgggacctggagtctggc agtgtgagctaccaccaggtggagggcgtggccgctccggtgcaacgctgtggagagaga cagcacagactgctgctgaccaacgagggtgtgttgcaggtcttgttctcagtgtctcag caggacctcctcagcagactcatgctctttggcagcgcggcgactgtagacgcagtgtgt cacctgaacagctgggggcgctgctccatccctgtccatgctctgcaggccggactgaag aaccgtcaactggacacggtcgacttcttcctgaagagcaaagaaaacctcctggacctc atgacggggttcggagctgtggatcaggtctccacaccgagcctgacccagagtgtccag cagttgtgtcctgcgttggacgtcctgtgctcgtccgtcagagactcaaacagtgaagct cagagtcgacagttttcagagcagctgctcaacgtcacgctgaactttgtcaacacacag atccgctcggtgctgtccgcctcacaacatgaggacgcaggtgtacggagctgtgtggac atcctggaccggtacctcactgaactgaggagctacatgaagagattcccatggcccaca ggaagtgacgcctccactccggcggaggacgaggacgaggacaaggacaaggacgaggac gtggacgaggcaccaaaggacgagtgggagcagctgcagactgaggaactggtgcggcgc tccatcttgaccaatcagatcccccgagctcaggccgccctgaggaggcggagccgcccg gagcagggtctgacggctctgaggacagagggactgcggcaggtcttctcctgcctgaga cagcgagacctgcagaccaccaacacactgctcaccaacatgggtttcagtgtgaagaag cagctccacagtatctgtctttacactgacgacaaaggcctgagggagtttgtggtggag gagctgtgtaggcggagttattttccggaggaggagatgcagagtgtggagttcatcaga cacatggagaagctgggatctctggccaggtcctgctgccctgcagacaccagctgtcac agggtcgttcacatggagacgggacttgacgaccaggttctggaggacctggttggacac aggagatccgacgaggagccgatgctctggcagaacctcagactggactgggtgaggaac tgggaccagagctgccagacggccgtcctcctgtccagactagagcacacagaggtgagt tcctgtgagcctgccgcgctgtggcgttacctgaccgccttccacgaccgccaccgcgtg gtcacctggatccagaaccaggacactggtggtggcgcccccctgtggccagagctggcc gcagaactagtgaacagcaacacactgtgcagcacctacatgagggagatgatcctggac cttctggccaggagaggacacttcatccccgacgagctggcagatttagagaagctgctg tggaggctgggtcagggaggaggagcgatggcgtcctctcctccggtccctcatcaccgc tcctcgcacggccttgacctccacggcctcttcatcaccttctgtctggagcgcggcctt cagttcctgctctacacgtacctggagcactacagactgactcccaggaactgccccctc cttacgagtcccggcctgtgtgagagtcagccctggtttgagatgctggtgaaaatccag gagatcaccacagatctgtcagacccaggtgtggtgtatcaggcgagtctgaccagtgct caggtgctgttaccgggcagccaggcgtctctgagcagtctgctgttagagggtcatagt tcactcgctctggccgccatcatgttcagccccggaggaatcgaccaggtgatgcttcag ggtgaaaggtcaggcaggtcagggaggtcaggcaggtcagggaggacagttgaccctcag ctcctgaagatggcgctggcgccgcactctaaactcaaggctgctctgttcccgtcagga ccgcgaggacacggctcgtcctcagacgtctccgtctaccatgtcctgcagtgtctccgt cctctggatgtgtccagactgtttggttggcagacagcaaacacgctgaactccacagag acatcagagctgcctcatttctccagccctcacctggtcaacaggttcgctctggtggag aacctggacttcctctactacctccgtcacggacgaccgtccttcgcctacgccaccttc ctcgtgcagcagctgagcagctgcagtgacgtaacgctgctacggcggcgtgtgcagcag caggtctacactctggcgttgcggtgttttaacgtagcgtccgtggcgtcggcgtccgtg tgtttctgtgagctgctcggcgtctgcagcctgaaactgagagtggacgtcagagtcatg aacctgatcctgcagcactggaaccaacaacacacacactctgatcctacacaacgacta cacacactgggagtgaaactggctgaggcggagcctggagcagcagagaagctgattggc tgcctggaagcagcagtggcagacactctggagcagaaagacgtccacaggtcgtcatat gaggcgtctcaggagtgggcgttacctgttcagttctgtctgctccacagtctgccgctc agctctgtttaccccgcccactgtgctgatgacggacagttcgtccacttcctgttgttt gtccagctgcacagtttcccgccccagcaggtgaggtcgctggtggccaggtttggcccc gccctccaggcccacctcagcctggcgttccaggacctgcaggtgcctctgaagacggaa aattggagtgggagtcgggttcagtcgtcggagcttttccacgtcctgctgcagagtcag gagcaggcgtcgccctgcagcttcctgctgcacgaggccgtggctcaatactgccccacg ctggccgtcctcgccgcctgtcaccagggggcggagctcctctcctgcctgtgtgtgtgg gtgttgacctctgtggatgatgtcactgtggctgaagccacctcccacctgctcgaagcc ccgcagcaccacgagtggaacctgcatgacctgtcaatcatctggaggacactgctggag cggggcctgatccagcccctcctccgaggctttgagctctttctgagggactgccccctg gtgttggtgctcaggatgtttgagctgtgctgtgactacaggaacttttccgaggccaaa gagaagctgctggacttccagaggacgctcatcactctgagaagcagcggcccggtttcc tccagtgacctccccctgcagtgggtggagagccaggcgtcggttctgctcctcacgatg ctgcagtgctgctcctcccagtacgacctccaccgcctgctgcagctgctggccgacgtc gacaagctcctcaaatccaacggtccagacttcaggaagctgagtcagctcagtcagttg ctgcaggggtcagaggtcagcctatcccccaggcttctgcagtgcacttctccctctgtc cagcaggaggagttccaggctgctgtggacgctctgcaggccagggggcgctacagccag gccagacaggtggctcagctggccggacttcctgtccagcacctgctgctgaaccagctc cttcaggaagtgaactcccagaagtccaagccacagtggaggaggctggagactcgagtc agcttctggaagaagtgtcaggagcagctgaagaccgacggcactgacccgaggcaggcg tcacagttcttcctgtcacaggccaaagctccgggtgtggacactcagactgagctgccg gacgtccaggaacgctgcctcctgctgggcatcgccgctcactggctctccctgctcgct ccacctcccgtcgacgagctggagagcctggagaagacgctgtggaggaaccaggtccgg cgacaagtcctcaccgctgccatggagaaggagagtgttttcaatctgccaccgcccagc gtcacatctgaaatgaacacgtacgaggttctgatgagggagttctccttctctaacatc tcagctctgaacacggagaggttcctcagtgtggaaggactgcccactccatgtgaggag caccagcagcaggagcaggaggaggtgaacgatggctcgggtttgagtccagaggagagg cgagttttgtcgacgttgattggtcggttgctagacgacggcagtgtccatgaagccagc cgagtctgccgctatttctcgctgtaccactcggacgtgtgggtggtgctacgctgccga ggcctggcgtctggagagctccttccccgaccaccagaagaggcatcggagcctgtgctg aggagcagcatcgccagctcttcctcgttcagtagcctgtcactcgccatgttccccctc cctgaagacgatgatgttgttgtcgagctccaaaggctccttgatcagtgtcgccatggc aacaattactgtaaacaagtgctcagcctctaccaactctctaaggagctgcagagctcg ttcagtcaggtctgcagggaggagcctcgctccgtgctggagatgctgctgctctcagat cagcctgagcgcttcagaaaggcccaggccttcatcagagctcagggtctgtctgcagac accgtggcccagctcgtctcctctgctgtggcccgagctctgctggcctcctccacccag gacctgcagcctgagagacaggtgttccgtcagtcagaggggcgggactctctgatccaa ctgatcaaactgtgcgatgatccaaacctggtgggaattaaactgatggaaaacatcaac actgttccactgagagacctgagctgcatcgtcgagttgttgatcgcggctcacgactgt ttcagtctcacctgtaacatggagggcatcgtgcgagtgcttcagggcgcccgccacctt agccacgcctacctcgctccaggagagcactacagcctgctggtgcgtctgctaacaggt atcggcagatacaatgaaatgacgtacgtcttcgacctgctgcatcaaaaccatcgcttt gagatgctgctgaggaagaaggtggacatggaccgtggacagtgctccagcctgaagacg tctctgctggactacatcaaacgctgtctccccgccgacagcgagaagcacaacatggtg gcgctgtgcttcagcatgaggagggagatcggagagaaccacgagatggctgccaggacg cagctgaagatcatcgaggctcagccgtgggtcgtcactcctgacctggagagctcgctg gtcaaagtgttgggtctgctgaaggacgctgccgagagtttctccaaggactcgtgtttg cgtcaggcgacccgctgcgtgaggacggccaagctcgtcgctcttcagctccacttcctc agacaggaactggacgtacgtgtcatcaacctgcgaccggcggagctgctgaacaccatc gtcgcgctgccgcgatgttaccaggtgtttgtggtgtcggaggcgtacggctacagtcca gactgggcggagattctgtacgagaaggtcgtagtgaagggagactttgtttacctggag gagctcaaacgccaccgcccactcacctccggcctgtttgaggacatatttaagaagctg gacgccgcccccagcagcgtcacgcccaacgtgaagcgcctgctgacgcactgtgacgac gtgtacagccgctacagactggcctaccagcagaatctgaacgacgtggcagaaacgctg ctgcaggacgccaagacgtccaactacctgaacgacagactcgccagctga

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