Solea solea (common sole): 131469907
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Entry
131469907 CDS
T10853
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131469907 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoe03021
]
131469907 (sf3b3)
03041 Spliceosome [BR:
ssoe03041
]
131469907 (sf3b3)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131469907 (sf3b3)
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
131469907 (sf3b3)
Spliceosome [BR:
ssoe03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
131469907 (sf3b3)
Complex B
131469907 (sf3b3)
Complex C
U2 SnRNP specific factors
131469907 (sf3b3)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
131469907 (sf3b3)
TFTC complex
131469907 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
131469907
NCBI-ProteinID:
XP_058501311
LinkDB
All DBs
Position
12:26409415..26434926
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKTMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQCTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGSPKAGAGQWASIVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVSGGFIYTYRLTSGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGIGKLLRIYDMGKKKLLRKCENKHVPTLVTGIHTIGQRVIVTDVQESLFWIRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSLAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacatcacactacagcgagccactggcatcacccatgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttccaggggaaagatcttggaactt
ctgcgtccagatgccaacacaggaaaggtgcacactctgctcacagtagaagtgtttggc
atcgtaaggtctctgatggcgttcaggctcaccggtggaaccaaagattacatagttgta
ggaagtgacagtggtcgcattgtcatcctggaatatcatccatcaaagaacatgtttgag
aagatccaccaggaaacatttggaaagagcggttgtcggcgcatcgttcccggacagttc
ctggctgtcgatccaaaaggcagagctgttatgataggagcgatcgagaaacagaagctg
gtttacattctgaacagagacgcagcagcgagactgaccatctcctccccactggaggcc
cataaagcaaacacactggtttaccacgtggtcggagtcgacgttggctttgagaatccc
atgttcgcctgcttagaaatggactatgaggaagctgacaatgacccaacaggagaagct
gccgccaacacacaacagactctcaccttctacgagctggatcttggcctaaatcacgtg
gtccgcaaatacagtgaggctttggaagagcatgggaatttcctcatcacagttccgggt
ggctcagacgggcccagtggtgtcctgatctgctccgaaaactacatcacctacaagaac
tttggagaccagccagacattcgctgtcccatcccgcgacgcaggaatgacctagatgac
ccggagcggggcatgatatttgtctgctcagccacacacaagaccaagaccatgttcttt
ttcctggctcagactgagcagggagatatcttcaaggttaccctagaaacagatgaagaa
atggtcacagaaatcaggatgaagtactttgacacgatccccgtagcaacagccatgtgt
gttctgaagactggcttcctgtttgtgtcttcagagtttggaaaccactacctttaccag
atcgctcacctgggtgacgacgatgaggagcctgagttctcatctgcgatgccactggag
gaaggagacaccttcttcttccagccccgcccactcaaaaatttagtgctggtggatgaa
caggagaacttatcccccatcatgtcctgtcagattgctgatctggccaacgaggacaca
cctcagctgtacgtggcctgtggtcgaggacccaggtctacactaagggtccttcgtcat
ggactggaggtttcagagatggctgtgtccgagctgcccggtaaccccaacgctgtgtgg
acagtacgcagacacgtggaagacgagtttgatgcctatatcattgtgtctttcgtcaac
gccactctggtcctgtccatcggcgagactgtagaagaagtgacggattccgggttcctg
ggaacaacacccactctttcctgctcgttgctgggggaagacgccttggtgcaggtttac
ccagacggcatccgtcacatccgtgcagacaagcgtgttaacgagtggaagactccgggt
aaaaagaccatcgtccgctgtgctgtgaaccagcggcaggtggtcatcgccctcactgga
ggggagctggtctactttgaaatggacccgtctggccagctgaacgagtacacggaacgc
aaggagatgtctgcagatgtggtttgcatgagcctggccaacgtccctcccggcgagcaa
cgctcccgattcctggctgttggactggtcgataacactgtccgaatcatctccctggat
ccatcggactgcctgcagcccctgagtatgcaggctctaccagcccaaccagagagtttg
tgtatcgtagagatgggaggggtcgagaagcaagacgaactcggagaaaagggaaccatc
ggtttcctctacctcaacatcgggcttcagaacggtgtgctgttgaggaccgttttggac
ccagtaaccggcgacctgtcggatacaagaacacgttacctcggatcacggcctgtcaaa
ctcttcagagtcaggatgcagggccaagaagcagttctggcgatgtccagtcgctcttgg
ttgagctactcgtatcagtctcgcttccacctgactcctctatcatatgagactctggaa
tatgcttctggctttgcctctgagcagtgcccagagggtatagtagccatttccaccaac
acactgagaatcttggctttggagaagttgggcgccgtcttcaaccaggtggcctttccc
ctgcagtgcactcccaggaaatttgtaattcaccccgagaccaataacctaattttgatc
gagacagaccacaatgcttacacggaggcgacgaaagctcagcgaaagcaacagatggct
gaggagatggtggaggctgccggtgaggatgaaagagaactggctgctgaaatggccgcc
gccttcctcaacgagaatctcccagaagccatctttggctccccaaaagctggagccgga
cagtgggcctcaatcgtgcgactggtcaaccccattcagggttcaactctggaccaggtg
cagctggagcagaatgaagctgcgttcagtgttgccgtgtgtcgatttccaaacacagga
gatgattggtatgttctggtcggcgttgccagagacatgattctcaaccccagatcagtt
tccggtggctttatctacacctacaggctcaccagtggtggagagaagctggagtttgtg
cacaagaccccagtggaagacgtgcctctggccattgctccatttcagggacgagtcctg
gtgggaattggaaaactactgagaatctacgacatgggaaaaaagaagctgctccgcaag
tgcgaaaacaagcacgtgcccaccctggtcactggcatccacaccataggccagcgcgtc
atcgtgaccgacgtccaggagagtctgttctggatccgttaccggcgcaacgagaaccag
ctcatcatctttgcggatgacacgtatcctcgctgggtgacgaccgcctgcctcctcgac
tacgacaccatggcgtctgctgacaagtttggcaacattagcattgtgcgtcttcccccc
aacaccagcgatgatgtggatgaagatcccaccggcaacaaagctttatgggacagaggc
ctcctgaatggagcatcacagaaggctgaggtgatagtgaactatcacgttggtgagacg
gtgctgtctctccagaaaaccactctgattcccggaggctcagagtccctggtctacacc
acactgtctggaggcattggcattttagttccattcacatcacacgaggatcacgacttt
ttccagcatttagagatgcacatgcgctcggagttccctccactgtgtggcagagaccac
ctcagcttcagatcctattacttcccagtcaagaatgtgatagatggagatctgtgcgag
cagttcaacagcatggaccctcacaagcagaagagcttggcagaagagctggacaggacg
ccacccgaggtctccaagaagctagaggacattcgcactcgctacgccttctaa
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