Solea solea (common sole): 131470309
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Entry
131470309 CDS
T10853
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssoe00535
]
131470309 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
ssoe00536
]
131470309 (acanb)
04091 Lectins [BR:
ssoe04091
]
131470309 (acanb)
Proteoglycans [BR:
ssoe00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
131470309 (acanb)
Glycosaminoglycan binding proteins [BR:
ssoe00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
131470309 (acanb)
Lectins [BR:
ssoe04091
]
C-Type lectins
Lecticans
131470309 (acanb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
Clec-141-158
EGF
I-set
Ig_3
ig
CLIC-like_N
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
131470309
NCBI-ProteinID:
XP_058502029
LinkDB
All DBs
Position
12:complement(19314231..19328098)
Genome browser
AA seq
1351 aa
AA seq
DB search
MSLLLLLCVSLPLISATVVLEDHEDLDGTLRVSIPMEMPLLPLLGGKVVVPCYFLDNTVN
DPGAPTITPLSHRIKWSYVVKEKVTTILVASEGKVQVEAEYLDRVTMVNYPLVPTDATLE
ITELRSKDSGTYRCEVMHGIEDNYDSVDIQVQGIVFHYRTITDRYTLTFEMAKAACIQNG
ATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHVPREPCYGDKENFPGVRTYGVREVN
DTYDVYCFAEKMSGRVFYSMSVEKFTFYEAKDQCAKLGARLATTGELYLAWKGGMDVCNA
GWLADGSARYPINVARPQCGGGLLGVRTVYLFTNQTGYPFPDSRYDAICFHDGEDENVVP
GRTTPFPDIIRITPTPGLYPGITPYPGREEVKGGEVDVFSPLPLPPSVTDTYTKVTPAVR
EPGVDLTGIDAAMASTGVVFHYRPITGRYTLTFLEARQACESIGAVIASPQQLHAAFEKG
LHQCDAGWLRDQTVRYPIVSPRDNCAGNLHYLPGVRSYGLRPASEQYDVFCYVERLQGEV
FFTSDYDSFSYEEAVHHCQKLNTTLATTGQLFAAWNQGFDKCRPGWLMDRSVRYPITTPR
SHCGGGLVGVHIIYAFPNQTGFPDEHSRYDAYCFKAEIPVVHTENETSVNMTTLTVDVIN
RTTVTIDHFAPTVETTVVYNETEFGVNITEIEEFINETTISVEVVPPVSRPLPPVSVDVS
GSGSADHSASGEPSGVSASASGDASGSGQITFSGHTDVFSGDQSASGGPQEAEGGSAVIF
SSGESGSASGSGEGVDGQQSGFGVSGSGFTSGSGDISGSGVISASGAISGSGAISGSGDI
SGSGAISGSGAISGSGAISGSGAISGSGAISGSGDISGVGELVIIMVDGKMVEVLKTHRQ
PDEQVLGKDGIEIIESSASGSGSTSGSGSGELSGISFIDHSGVDLTIQPPGEQEVSGYRP
FGSGFHSGFPSGFPSGISGSGSASASGDSFLHHDNVIFVTDDEVMEVAVTPLVDQPQQGR
GVVEVSGQGSGSGIHHEFSGTLDQSSHFSASGAPEEASTLYVVTPEAAYTSPTTAPSVSL
ASPAVVEQPDVVEASPDPCNPNPCGSGKCSVQGELAICQCPNGFTGEDCSTPVQGCAEGW
LEFMGSCYLHFAERYTWSDAEQRCQELNAHLVSINSQEEQEFVNSNGQDYQWIGLNDKDV
QNEFRWTDRSSLTFVNWRPNQPDNYFNSAEDCVVMIWHEGGQWNDVPCNYHLPFTCKTGP
VMCGAPPEVQHAKTMGSSRDLYPVNSIVRYQCDAGYTQRHLPVIRCMPDGQWGEPQVECT
EAGANSNRLHKRSLRRRSKAINSQQEQRRLL
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcttgcttctgctgtgtgtgtccttgcccctaatatcagcaacagtcgtatta
gaagatcatgaagacttggatggcacattgcgtgtcagcattccaatggagatgcctctt
ctccctctgctgggaggaaaggtagtggtcccatgttacttcctggacaacacagtcaat
gaccccggagccccaaccatcaccccactctcccatcgtatcaaatggtcctatgtggtc
aaggagaaagtcaccacaatcctggtggcatcagagggaaaggttcaggtagaggcagaa
tatttggaccgagtgacaatggtcaactaccccctggtgcccactgacgccactttggaa
ataacagagctgaggtccaaagattctggcacttaccgctgtgaagtgatgcatggcatc
gaggataattatgactctgtggacatccaggttcaaggtattgtgttccactaccgaacc
atcaccgatcgctacacgctgacatttgaaatggccaaggcagcctgtatccagaacggt
gccaccattgccactccagcccaactccaggctgcctatgacgatggataccaccagtgc
gatgctgggtggctctctgatcaaactgtcaggtaccccatccatgtgccccgggagcct
tgttatggagacaaggagaacttccctggagtgagaacctatggagtgagagaggtcaac
gacacctacgacgtatactgctttgcagagaagatgtcaggcagagtcttttactccatg
tctgtggagaagtttactttctatgaagcaaaagatcagtgtgccaaacttggagcccgg
cttgcgaccactggagaactttacctggcctggaaaggtggcatggatgtgtgcaacgct
ggctggctggcagacggaagcgcacgctatcctattaatgtcgccaggcctcagtgcgga
ggggggctcctgggagtgagaactgtctacctgttcaccaaccagacaggataccccttc
ccagattctcgttatgacgccatctgcttccatgatggagaggatgaaaatgttgtgcct
gggaggaccactccattcccagacatcattagaattacacccactcctggtttgtaccca
ggcatcactccatatcctggtagggaagaggttaagggtggagaagtggatgtcttctca
cctctgccacttccaccaagtgtgacagacacgtacaccaaagtgacccctgctgtacgt
gaacctggagtcgacctgacaggcatagatgctgcaatggcctccacaggtgttgtgttc
cactatcggcccatcactggtcggtacactttgaccttcctggaggctcggcaggcctgt
gagagtattggggcagtcattgctagtcctcagcagctgcacgcagcgtttgagaaaggt
ctgcaccaatgtgatgcgggttggctccgtgaccagacagtcaggtatccaattgtgtca
ccaagagataactgtgcaggtaatctgcattaccttccaggagtcaggtcctatggcctg
aggccagccagtgaacaatacgacgtattttgttatgtagaacgtttgcaaggtgaggtc
ttcttcaccagtgactatgacagcttctcctatgaggaggctgtgcatcactgtcagaaa
ctgaacaccactctggccaccactggacagctgttcgccgcctggaaccaaggctttgat
aagtgccgtccaggttggctgatggaccgtagtgtccgctaccccatcacaacccccagg
tcccactgtggaggcggcctggtgggagttcacatcatctatgccttccccaaccagaca
ggattcccagacgagcactcacgctatgacgcatactgcttcaaagctgaaattccagtt
gttcacactgaaaatgaaaccagtgtaaatatgacaacactgacagtggacgtcatcaac
aggacaacagtcacaatcgatcactttgctcccactgttgaaactactgtcgtctacaat
gaaacggaattcggagttaatatcactgaaatagaggagttcatcaacgagacaactatc
tcagtagaagttgttcctcctgtgagtcgccctttacccccagtctctgtcgatgtgtca
ggctctggttcagctgatcattcagcgagcggggagccctcaggagtgtctgccagtgcc
agtggggacgcctctggttcaggacaaatcaccttcagtggacacacagatgtcttctct
ggggaccagtctgcctctggaggcccccaggaggcagaaggaggaagtgctgtcatcttc
tcctctggagaatcgggtagtgcttctggatctggggagggggttgatggacagcaatct
ggctttggggtatcaggatcaggttttaccagtggaagtggggacatcagtggtagtggg
gtcataagcgcgagtggggccatcagtgggagtggagccatcagcgggagcggagacatc
agtgggagtggagccatcagtgggagcggagccatcagtgggagtggagccatcagcggg
agcggagccatcagtgggagcggagccatcagtggaagtggggatattagcggtgttgga
gagttggtgatcatcatggtggatgggaagatggtggaggtattgaaaacccacagacaa
ccggatgagcaagtgttgggaaaggatggtattgaaataattgaatcaagtgcatctgga
tcaggaagcacctctgggtcaggctctggtgaattatctggcatctcatttattgaccac
agtggtgttgacctgaccattcagccacctggagagcaggaggtgtctggatatcgtcct
tttggatcaggcttccacagtggctttcccagtggttttccttctggtatttccggaagt
ggctctgcctctgcctctggagactctttcctgcaccatgataatgtcatctttgtaaca
gatgatgaggtgatggaagtggctgtgacaccgttggtagaccaacctcagcaaggccgg
ggggtggtggaggtaagcgggcaaggaagtgggtcagggatccaccatgaattcagtggc
actttggatcaaagctcacatttctcagcaagtggagcccctgaagaagccagcacactt
tatgttgtgacccccgaagcagcatataccagcccaactacagcaccatctgtgtcatta
gcaagtcctgctgttgtggagcagcctgacgtagtggaagcctctccagacccttgtaac
ccaaacccctgtggttcaggaaaatgctctgtgcagggagagcttgctatatgtcagtgt
cctaatggcttcactggtgaagactgctcaacaccggtgcagggctgtgctgaaggctgg
ttggagttcatgggcagctgttaccttcactttgcggagcgatacacctggtctgatgct
gagcagcgctgtcaggagctcaatgctcatctggtcagcatcaactcccaggaggagcag
gagtttgtcaactcaaatggacaagactaccagtggattgggctcaatgacaaagacgtg
cagaatgagttccgctggacagacaggagttctctgacctttgtgaactggaggcccaac
cagccagacaactacttcaactctgcggaggactgtgtggtgatgatctggcatgagggt
ggacagtggaacgatgtgccgtgcaactaccaccttcccttcacctgcaagactggacca
gttatgtgtggagctccccctgaggtgcaacatgccaagacaatgggcagcagcagagac
ctctaccccgtcaactccatagtccgctaccagtgtgatgcaggctacacacagcgccat
ctgcctgtcatacgctgtatgccagatggacagtggggggagccacaggtggaatgtaca
gaagctggtgccaacagtaacaggctacacaaaagatccctcaggagaagaagtaaggcc
atcaacagccaacaggaacagaggaggctgctctga
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