Solea solea (common sole): 131470470
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Entry
131470470 CDS
T10853
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131470470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssoe04515
]
131470470
Cell adhesion molecules [BR:
ssoe04515
]
Immunoglobulin superfamily
NGL family
131470470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Ig_6
DUF4293
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
131470470
NCBI-ProteinID:
XP_058502295
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Position
12:complement(8015979..8165007)
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AA seq
648 aa
AA seq
DB search
MLNNMTSSQQQQMMRGPRWNRALSDPLLVLLLALQLLVVAGLVRAQTCPSACSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSSAELKCKASSLTSVSWITPNGSIMTHGAYKVRLSVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTIVQQKVGP
TPSAGMWESVSATSTTTTTFRTPLSTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaatatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgcttgtgctgcttctggccctccagctgctcgtggtggca
gggctggtacgtgctcagacgtgcccctccgcctgctcctgtagtaaccagttcagcaaa
gtcatctgcactcgccgaggcctgcgggacgtccctgatggcatctctactaatacacgc
tacctgaatctgcaggaaaatctcattcaggtcataaaggtggacagcttcaagcatcta
agacatctggagatcctgcagctgagcaaaaaccacatacggaaaattgaactgggggcc
ttcaatggactggccagtctcaataccttggagctttttgataaccgcctcaccaccatc
ccaaacggggcatttgagtacctgtccaaactaaaggagctttggctgaggaataacccc
atagagagtattccctcctatgctttcaacagagtgccatcattacgccggttggacctt
ggggagcttaaaaggctctcctatatttctgagggcgcctttgaagggctgagcaatctg
cgctacttaaatctcgggatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaactggagatgtcagggaaccagctatctgtcatccggcccggctctttt
aaagggctcatccacttacaaaagctatggatgatgcatgcacagatccagaccatcgaa
agaaactctttcgatgacctgcagtcactggtggagctcaatctggcccacaacaacctc
accctcttgccccacgatctcttcactcctttacatcacctggagagggtgcacttgcac
cacaacccgtggaattgtaactgtgacattctctggctaagctggtggcttaaggagatg
gtacctgcaaacactagctgctgcgcacgctgtagctcacctacccaccacaaagggcga
tacattggcgagttggaccagaactactttcactgttatgctccggttattgtggagcct
cctgcagacctaaatgtgacagagggaagctctgcagagttgaaatgcaaagccagttct
ttgacctctgtgagctggattacacccaatggttccatcatgacgcatggtgcgtacaag
gtcagactctcagtgctgaatgatggaacgctgaacttcactaacgttaccatgcaggac
acgggcacatacacatgtatggtcagtaattcggcgggtaacacgacagcatctgccacg
ctcaacgtgtcctccacggagaacagcagcttcagctacttcaccacagtaacagtggag
accatagaaacgccacacaatgaaggcttcaccactatcgtgcagcagaaggtgggcccc
accccctctgctggtatgtgggagtctgtttcagccacctctacaacaaccaccacattt
cggaccccactctccacccgtgccacggagaagacttacacaatccctgtcacggagctg
ggtggggagggttcacttaacggcttggatgaggtgatgaagacaaccaagatcatcatt
ggctgctttgttgcaatcacactaatggcagctgtcatgctgattatcttctacaagatg
cgcaaacagcaccaccagcagaatcaccacgcccccacgcgcactattgagatcatcaat
gtggatgaggactgtgttacaggaggcccaggcatggagggccacctgactctgcctcct
cttgagcacgagcacctcaaccactataacacctacaagactgcatacaaccatgcctct
actatcaactccatacacagctcagcgcacgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
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