Solea solea (common sole): 131471107
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Entry
131471107 CDS
T10853
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131471107 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssoe01007
]
131471107 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssoe03016
]
131471107 (vars1)
Enzymes [BR:
ssoe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
131471107 (vars1)
Amino acid related enzymes [BR:
ssoe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
131471107 (vars1)
Transfer RNA biogenesis [BR:
ssoe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
131471107 (vars1)
Prokaryotic type
131471107 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Arc1p_N_like
Val_tRNA-synt_C
GST_C_2
GST_C_3
Snapin_Pallidin
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
131471107
NCBI-ProteinID:
XP_058503393
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All DBs
Position
13:5947224..5962248
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AA seq
1277 aa
AA seq
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MATLYVSPHPDDFRSLLALLAAEFCPSSRPRTITENPPASLNARARPTLVLGAGEGDTVL
SGASAVAWYLASQGKTSGVGVKQQSQVWQWLSFADNELTPVSCALVFPLMGVMGVDKKLQ
QSSRAELLRVLKVLNQALEPKTFLVGESITLADMAVATAILLPFKYALEPSDRKMLANVT
RWFTTCINQPQFLKVLGKITLCEKMAPVTLVAAVASEVKVVNGGPAADSAGTTDDGPPKT
EAQLKKEAKKREKLEKFQQKKDMEAKKKTQPATEKKAKPEKKELGVITYNIPTPPGEKKD
VISPLPDSYSPQYVEAAWYPWWEKQGLFKPEYGRKSISEQNPRGMFMMCIPPPNVTGSLH
LGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLKRERGMSRHDLGREK
FIEEIWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHEEGVIYRS
KRLVNWSCSLNSAISDIEVDKRELTGRTLLPVPGYKDKVEFGVLVSFAYKVDGSDEEVIV
ATTRIETMLGDTAVAVHPADPRYQHLKGKTVLHPFCDRKMPIVMDEFVDMNFGTGAVKIT
PAHDHNDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARKAVLQALTDRGQFKEI
KDNPMVVPVCSRSKDIVEPLLKPQWYVSCADMGKQAADSVREGRLKIIPEHHLKTWYNWL
DNIRDWCISRQLWWGHRIPAYFITVNDPSVKPGEDMDGHYWVSGRTEEEAREKAAQRFHV
SVDKISLRQDEDVLDTWFSSGIFPFSIFGWPNESEDLNVFYPGTLLETGHDILFFWVARL
VMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLIESN
LDPLEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKL
WNAVKFAMKTLGDNFVPSEKAQLCGDESVSDRWILSRMCAAVGLCDAGFKAYDFPGITTA
IYNFWLYELCDVYLESVKPVFSKAEEDSVSQRQALVCRQTLYTCLEVGLRILSPVMPFVT
EELYQRLPRRRPQSDPPSISVTPYPDTEEFCWHSEEIDRDMDFIMTVIKTTRSLRSDYNL
NKLRTDCYLQCIDSTTASLVQKYSLQIQTLTYSQAVISLTANQPVPEGCAVAIASDRCTV
NLLLKGLIDVEKEVAKLMTKQCDLEKQIEKLKDRMMKNDYKEKVPVKVQEQDAEKLRQSQ
TELEKVNEAVSNFRKMM
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctatgtgtccccccaccctgatgacttcaggagccttctggctctctta
gctgcagagttttgtccttcatctcgccctcgaaccatcacagaaaaccctcctgcgtcg
ctgaatgccagagccagaccgactctggtgctgggagccggagaaggtgacactgtcctg
agtggggccagtgctgttgcatggtatctggcctctcaggggaagacgtctggtgtcggt
gtgaagcaacagagccaggtgtggcagtggctgagctttgcagacaatgagctcacccct
gtgtcttgtgctctggtcttcccactgatgggggtgatgggagtagataagaagctccaa
cagagttcacgtgcagagttgctgcgtgttctaaaggttctcaatcaggcactggaacca
aaaaccttcctggtgggagagagcatcaccctggcagatatggctgttgctacagctatc
ctccttccgttcaaatatgcattggagccttcagaccggaagatgttggccaatgttacc
aggtggtttacaacctgcattaaccagccacagtttcttaaagtgctggggaagatcact
ctgtgtgagaaaatggcgccagtcacactggtggcagctgttgcttcggaagttaaagtt
gttaatggtggtcctgctgctgattctgcaggaaccacagatgatggtcccccaaagacc
gaagctcagctaaagaaggaagcaaagaaaagagaaaagttggaaaagttccagcagaag
aaggatatggaggcaaagaaaaagacacagccagcaacagagaaaaaagccaaacctgag
aagaaagaactgggagtgatcacatacaacatccctactcctcctggggagaaaaaagat
gtcatcagtccacttcctgactcctacagtcctcagtatgtggaggctgcatggtatcca
tggtgggagaagcagggactcttcaagcctgagtatgggaggaagagcatcagtgagcag
aaccctcgtggcatgttcatgatgtgcatcccaccacctaatgtgactggatcacttcac
ctgggtcatgcacttaccaatgccattcaggactctctgaccagatggcacaggatgcga
ggcgagaccacgctgtggaacccgggctgtgaccacgctggcattgccacacaggtggtg
gtggaaaagaagctgaagagagagaggggtatgagccgccatgacctgggccgggaaaag
ttcattgaggaaatctggaagtggaagaatgagaagggagatcgcatctaccatcagttg
aagaaacttggctcctctctggactgggacagagcctgcttcaccatggaccctaaactt
tcctatgcagtccaagaggcctttatccgcatgcatgaagaaggagtgatctacaggagt
aagaggctggtcaactggtcctgctctctaaattctgccatctctgacattgaggtggat
aagcgggaactcactggcaggactctcttacctgtgcctggttacaaagacaaagtggag
tttggggtcctggtgtcttttgcttacaaggttgatggatcagatgaggaggtgattgtg
gccacaactcgtattgagacgatgctgggagatactgctgtagccgtccaccctgccgac
cccagatatcagcatctgaaggggaaaacggtgctgcatcccttctgtgaccgcaagatg
cccattgtcatggatgagtttgtggacatgaactttggaacaggtgctgtcaaaatcacc
ccagctcacgaccataatgactacgaggttggagagagacacaatctggccttcatcaac
atcttggatgagaatggcctgctcattaatgtgcctcctcccttcctgggcatgaagcgc
tttgaggccaggaaggcagtcctgcaagctctcactgacagaggccagtttaaagaaatc
aaagataaccctatggttgttccagtctgcagtcgttccaaggacatcgtggaaccgctg
ctgaagccacagtggtatgtgagctgcgcagacatggggaagcaggcggctgattctgtt
agagagggacgtctcaaaatcatccctgagcaccacctcaagacctggtacaactggttg
gacaacatcagggactggtgcatctctcggcagctgtggtggggtcaccgtatccctgct
tacttcatcactgtcaatgatccttctgtgaaaccaggagaggacatggacggtcattac
tgggtgagtgggagaacagaggaggaggccagagagaaggcagcacagcgcttccatgtg
tctgtggataaaatttccctcagacaggatgaggatgttctggacacttggttctcatct
ggcattttccccttctctatctttggatggcccaatgagtccgaggacctgaacgtgttc
tatcctggcaccctgctggagacgggccatgacatcctgttcttctgggtagctcgtttg
gtgatgatgggcctcaaactgacgggcaaactgcccttcaaagaggtgtatctgcatgcg
gtggtgagagacgcccacggaaggaagatgagcaaatctctgggcaacgtcattgaccct
ctggatgtcattacagggatctccctcgagggtcttcatgcccagttgatagaaagcaac
ttggatcctctggaggtggagaaggcaaagcagggccagaagtcagattacccaaatggt
atcccagagtgtggcacagatgctctccgctttgcactgtgtgcctacaccagccaaggt
cgggatatcaacctggatgtcaaccgcatccttggttaccgtcatttctgcaacaaactg
tggaacgccgtgaagtttgccatgaagactctgggagacaactttgtaccttcagagaaa
gcccagctgtgtggagatgagagtgtgtcagacaggtggattctgtctagaatgtgtgct
gctgtgggcttgtgtgacgctggctttaaagcctatgacttcccagggatcaccaccgcc
atctacaacttctggctgtatgaactctgcgatgtctacctggaaagtgtcaaaccggtg
ttcagtaaagcggaggaagacagcgtcagccagagacaggcactggtgtgcagacagaca
ctttacacctgtttagaggtcggtctacgcattctgtctcctgtgatgcccttcgtcact
gaggagctctaccagaggttaccacggagacggcctcagagcgatccacccagcatcagt
gtcacaccataccccgacactgaggagttctgctggcacagtgaggaaatcgaccgcgac
atggacttcataatgaccgtgataaagacgacccggtcactcaggtcggactacaacctg
aacaagctccggactgactgttatctccagtgcatagactcgacaacagcgtccctggtg
cagaagtacagtctgcagattcagaccttgacgtattctcaggccgtcatctctctgaca
gctaaccagcctgtccctgagggctgtgctgtggctattgcctctgacagatgtactgtc
aaccttttgctcaagggtctcattgacgtggagaaggaggtagcgaagctgatgacaaag
caatgtgacttggagaaacagatagagaaactgaaagacaggatgatgaagaacgactac
aaggagaaggtgccagtgaaggtgcaggagcaagatgcagagaagctacgacagagccaa
accgaacttgagaaagtgaacgaggctgtgagcaacttcaggaaaatgatgtaa
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