Solea solea (common sole): 131471116
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Entry
131471116 CDS
T10853
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04621
NOD-like receptor signaling pathway
ssoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
131471116 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131471116 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssoe04054
]
131471116 (nod1)
Pattern recognition receptors [BR:
ssoe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
131471116 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
AAA_16
AAA_30
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
131471116
NCBI-ProteinID:
XP_058503420
LinkDB
All DBs
Position
13:complement(21487627..21498252)
Genome browser
AA seq
939 aa
AA seq
DB search
MDSTKKAKCVHMLTHHRELLVSRLRSIQCILDNLLASGFLCEEDVEIVRRAVTKMDQVRK
ILELVQCKGEEACEYFLFIIYKVCDAYIDLQPWLKEINFNPRSHIAAMKVVNTDPISRYS
EKLRQEMSRDTCFIMSYGQHDETRLEDLYTDTLMELFNDCNESLGFMESLDQLLGDHAVF
NPQGEINYVMGDAGVGKSILLQKLQNLWSKKELQTDAVFLFKFRCRMFSVFKKTEQISLR
DLLFNYNCHPDHDPDNEVFDYILRFPEKVIFTFDGYDEIHEDLDLLNVPEVVSPEHKAHP
LQLLVSLLCGKLLKGSQKVLTTRTGIEIQSRVIRKKVALRGFSPTHLKTYINLHFQEQEH
RELVSVQLDASPHLCGLCSTPLFSWIVFKSFKHLHTIHDSFHLPDTCVTLTDIFLLLSEV
FLSHSTSTASSQLKKSTRCASQTFKSRLRPLAAFAKLALQGMEGGTFICDQEEITACGLR
EEDLSLGFLRPVSEYDARGGSANFEFLHITLQSFLAAFALVLDEQAPANSIRKFFTECSR
QRESSCLLFDSCINNSSKHSEKNPFVTNEHLQFTNLFLCGLLSKAHNDLMGHLVSPVLLK
KKRALLKSYLSTSVKSHLHGLPHYAGEEGNKVHVLPNFLWMLRCIFETGSQDIAQMTAKG
ITANLIKLGYCNVYSGDCTAINFVLQHHQKLLGVDMDNNNISDYGVKQLKPSFCKMTVVR
LCVNHLSDSSIEVLAEELCKHKVVEVLGLYNNHITDVGAKLVAQIVEECPKLRVLKIGKN
KITSVGGKYLASAIQKSKSIFDVGMWGNSIGDEGAEAFAGALRHHPNLTNLSLSANGITS
TGGKFLAEALKENSVLRIFWLVQNELADDAAPHLAELVEANTGLSHLWLINNQFTAHGLK
HLAEALTHNTALKEICVKGNQLSAEEENQFEAQKRLRFH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaccaaaaaggccaaatgcgtgcacatgctcacccaccacagagagctgctg
gtgtccaggctgaggagcattcagtgcatcctggacaacctgctggccagcggcttcctc
tgtgaagaggacgtcgagatcgtacggcgggctgtcaccaagatggatcaggtgcgcaaa
atcttggagcttgtccagtgcaaaggggaggaggcctgtgaatactttctctttatcata
tacaaagtatgtgatgcatacatagacctccagccatggctgaaagagataaacttcaac
ccaaggagtcacatagcagcgatgaaagtggtgaacacggatcccatcagcagatatagt
gagaagctgaggcaggaaatgagccgggacacctgtttcatcatgtcttatggacagcat
gacgagactcgtctggaggatctttacaccgacaccctgatggagctgttcaatgactgc
aatgaaagtctgggcttcatggagagtctggaccagctcctgggagaccacgcagtcttc
aatccccaaggtgaaatcaactatgtgatgggggacgccggtgtgggaaaatccatcctc
ctgcaaaagctccagaacctctggtccaagaaagagctgcagacggacgctgtcttttta
tttaagttccgctgtaggatgttcagtgttttcaagaagaccgaacagatttccctcaga
gaccttctgttcaattacaactgccacccggatcatgatccagacaatgaggtgtttgat
tacatcctacgcttccctgaaaaggttatttttacatttgatggttatgatgagattcat
gaggatctagacctgttgaatgtgccggaagttgtgtcgccagaacacaaggcccaccct
ctccagctgcttgtcagcttgctctgtggaaaactactgaagggctcccagaaggttctg
acaactcggacagggatcgagatccagagcagggtgatccgaaagaaggtggctctgcga
gggttctcgccaactcatctgaagacctacattaacttgcactttcaggagcaggagcac
agagagctggtgtcagtccagttggatgctagcccccacctctgcggcctttgctccacc
cctctcttcagctggattgttttcaagagcttcaagcacctgcacacaatacatgatagt
tttcatctgcccgatacatgcgtcacactcactgacatcttcctcctgctctctgaggtg
tttctcagccactcaacttcaaccgcttcgtctcagctgaagaaaagcacccgctgtgcc
tcacagacgttcaaatcgaggctcaggcctctcgctgcttttgccaaactggcactacag
ggtatggagggcggcaccttcatttgtgaccaggaggaaatcaccgcatgtggtctcaga
gaggaggacctgtcgctgggctttctcaggcctgtcagcgagtatgacgccagaggaggc
tcggcaaactttgaattcctccacattaccctgcagtctttcttggcggcgtttgctctt
gtgttggatgagcaggctccagcaaactccattcggaagttcttcacagagtgcagcagg
cagagggaatcctcctgcctgctctttgactcgtgtatcaataactcctcaaagcacagt
gaaaagaacccatttgtgaccaatgagcaccttcagttcactaatctcttcctgtgcggg
ctgctgtccaaggctcacaatgacctcatggggcatctggtttcccctgtgttactcaag
aaaaaacgggccttgctgaaatcctacctgtccactagtgttaagtcccacttgcatggc
ttaccccactacgccggcgaagaaggcaacaaagtccacgttctgccaaactttctgtgg
atgctgagatgcatctttgagaccgggagccaagacatcgctcagatgacggcgaaaggc
atcacagcgaacttaatcaagctgggttactgcaatgtgtactcgggggactgcaccgcc
attaactttgtcctgcaacaccatcagaaactcctgggtgtcgacatggacaacaacaac
atcagtgattatggcgtgaagcagctgaagccttcgttctgtaagatgacagtcgtgaga
ttgtgcgtcaatcacctgtcagacagtagcatcgaggtgctcgcggaggagctgtgtaag
cacaaagtggtggaggtcttgggactttacaacaaccacatcacagatgttggcgcaaag
ctcgtcgctcagatagttgaagagtgtccaaagttgcgggttctcaagattggtaagaac
aagatcactagtgttggtgggaagtatctggccagtgcaattcagaagagcaagtctata
tttgatgtgggaatgtgggggaacagcatcggtgacgagggagcagaagcattcgcggga
gctttgaggcaccaccccaatctcaccaacctcagtctgtcggccaatggcatcacatca
acgggggggaagtttctggcagaggctctgaaagagaacagcgtcctcaggatattctgg
ctggtgcagaatgagttggcggatgacgcagccccacacttggctgagctggtcgaagcg
aacacaggtttaagtcacctctggttaatcaacaaccagttcactgcgcacgggctcaaa
cacctcgccgaggccttgactcacaacacagcactcaaagagatatgcgtgaaaggaaac
cagctctctgcagaggaagagaatcagtttgaggcacagaaaaggctgcgcttccactga
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