Solea solea (common sole): 131471204
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Entry
131471204 CDS
T10853
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03018
RNA degradation
Brite
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131471204 (ddx61)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131471204 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
131471204 (ddx61)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
131471204 (ddx61)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131471204
NCBI-ProteinID:
XP_058503577
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All DBs
Position
13:2365874..2373223
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AA seq
486 aa
AA seq
DB search
MATARTANPAPMIGLNKAANGQLRGQSKAAGQPGFLTTAQHFGAPQKMSSIPQNSGGIKF
GDDWKKCLELPPKDTRMRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIP
IALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAMVMVPTRELALQVSQISIQIS
KHLGVKVMATTGGTNLRDDIMRLDEIVHVVIATPGRILDLIKKGIAKVDRTQMMVMDEAD
KLLSQDFVVLIEDIISFLPKNRQILLYSATFPISVQKFMSKHLQKPYEINLMEELTLKGI
TQYYAYVSERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMM
QEYRNRVFHDFRNGMCRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRIGRSGRFG
HLGLAINLITSEDRFNLKTIEDQLITDIKPIPGSIDKSLYVAEFHSVDPDDDGGDTEAKI
KDLGAP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcaagaacagcaaacccagcaccaatgattggattgaacaaagcagcaaat
ggacagctcagagggcagagcaaggctgcaggacaaccaggattccttacaactgcccaa
cacttcggtgccccacagaaaatgagcagcattcctcagaacagtgggggcatcaagttt
ggggatgactggaagaagtgcctggagcttcctccaaaagacaccaggatgaggacttcg
gatgtgacatcaactaaaggaaatgagtttgaagactactgcctaaagcgggagcttcta
atgggaatctttgagatgggatgggagaaaccgtcccctatccaggaggaaagcatcccc
attgcactatcaggcagggatattttggctcgagcaaagaatggcacaggaaaaagtgga
gcctacctcattcctctgctggagaggatcgatctgaaaaaggatcacatccaggccatg
gtaatggttccgaccagagagttggccctgcaagtgagccaaatcagcattcaaatcagc
aagcaccttggagtcaaggtcatggccaccactggtggcaccaacctgagagatgacatc
atgcgtcttgatgagatagtgcatgtagtgattgctacaccaggcaggattctggacctg
ataaagaagggtatcgcaaaggtggacaggacccaaatgatggtgatggatgaggcagat
aagctgctgtcccaggacttcgttgtcctgattgaagatatcatcagcttcctgccaaag
aatcgtcagatcctgctttactctgccacattccccatcagtgtgcaaaaattcatgagt
aaacacctgcagaagccgtatgagatcaacctgatggaggaactgaccttgaagggcatc
acccagtactacgcctatgtgtctgagagacaaaaggtccactgtctcaacacactgttt
tccaggcttcagatcaaccagtccatcatcttctgtaactccacccaaagagtggagctt
ctggctaagaaaatcacacagctgggctactcgtgcttctacatacatgcaaagatgatg
caggagtacaggaaccgcgtcttccacgacttcaggaatggaatgtgcagaaacctggtc
tgcacagacctcttcactcggggaattgacatccaggcagtgaacgtggtcatcaacttc
gactttcccaaaagtgccgagacttacctgcaccgcattggccgatcagggcgttttggt
cacctgggcctggccatcaacttgataacatcagaggaccgcttcaacctaaaaacaatc
gaggatcaactgatcactgacataaaacccatcccaggcagcatcgataagagcctgtat
gtggcagagtttcactccgttgatccggacgatgatggaggagacacagaagccaaaatc
aaggatctgggagcaccttga
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