Solea solea (common sole): 131471303
Help
Entry
131471303 CDS
T10853
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04510
Focal adhesion
ssoe04512
ECM-receptor interaction
ssoe04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
ssoe04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
131471303
Glycosaminoglycan binding proteins [BR:
ssoe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131471303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131471303
NCBI-ProteinID:
XP_058503789
LinkDB
All DBs
Position
1:11823108..11846390
Genome browser
AA seq
1672 aa
AA seq
DB search
MGRPVLVVPLLLFAVMLMGTRAKNCVCNGRSRCRCEGVKGNRGDKGYAGIQGPPGLEGRP
GPGGHVGPKGPKGNTGPAGPMGSKGDPGPEGKEGFAGSHGLPGIPGLQGLPGPPGAPGCN
GTDGEDGPPGIPGTDGFYGHSGPPGLPGPKGESRVSENLVGHPGPPGWDGELGARGPPGE
TGPPGDHGPRGSIGHPGNLGAKGPKGQGGVGGIPGLRGPKGRPGPQGVPGPPGRIKEYFT
EIEPLIEGLKGNKGDGGEKGCKGEPGGNGYSIHIKGSKGDRGAQGPEGKPGKDGDPGQLG
YKGNTGHSGDPGFPGTPGWTGEKGNIGPPGPPGEIISHVTEPPKGYRGDPGLPGPPGLPG
SRGFVGFPGPDGLPGRASGIGIPGPHGPSGFPGPKGEPGEPGHMYTGLPGLDGDPGDQGP
PGDQGPPGPPEDRNNRITKGLPGIKGMKGIPGPIGYDGTFGMKGLKGEPCYECIGPGLPG
SPGPPGPPGIPGYNQGPGAKGDPGFPGPSGLPGRPGPIGETGLPGAPGRKGDAHSYNTPG
IKGERGDPGQPGQPGANGLPGLHGLPGRKGNQGPPGDLYPFPGDRGLTGAPGLSGRSGPV
GLPGPVGYGPPGLSGSKGDVGVPGLPGQPGIPGQKGEPSHFHAKGPPGPQGFKGLPGSPG
NPGYPGVPGSPGAPGALGQKGERGHLSFPGKQGTQGGKGEKGKPGLPGYPGRGLPGQPGP
QGPPGAPGLKGNSGPGKTGPPGFPGPMGEPGAQGTIGDPGTPGLPGKTGPTGNPGFPGEK
GSKGSVGPPGLPGSKGSCTDLPGPAGPAGPDGLPGVPGSNGFPGEKGGQGFPGSGHSGPH
GEPGFPGPSVPGSYGLPGQKGIKGQNGLPGQQGLRGDPGPDGLPGYGPDGLPGPIGPPGL
IGSPGPAGAKGSRGPTGINGEPGFRGPKGPPSPPPHTDLIGPQGDPGTPGDPGKSGPSGD
PGITGAKGLRGREGAVGVPGLRGPPGDPGIDGPVFSKGTQGPAGDPGDPGVRGPNGLKGF
KGDQGIVGATGPSGAPGPNGYKGIEGEPCDCEHGLPGPVGQKGEPGLANTYEMKGQKGEP
GISGTVGVPGSRGVKGNPGPVGEIGPPGYQGPKGSDGPPGQKGQPGPNGPLGYPGPPGAR
GYPGPKGNQGRDGIPGPPGQKGDIITEVTPGRRGDTGQPGPPGNPGPPGLSVTASPGPSG
DRGQPGPHGANGPRGPPGREGACVPGLKGNRGPPGSPGRPGWPGSPGPPGLSLPGFKGDR
GNMGLTGSPGYIGPPGDPGPQGPQGAKGGPGSPGPKGYSGPPGIQGRPGGSGDPGYTPGP
SGPPGPKGFPGRPGRKGEPVLIAAIHERGPPGLPGPPGNQGSPGSTGSSGPTGFPGKPGL
KGVRGSSPIGLPGFPGVKGEKGRAGLPGPDGRSGDPGHKGLPGLPGTALPCDVDTFMIAR
HSQSIHVPDCPRGSTFIYSGYSLLFINGNKRTHGQDLGTMGSCLPRFSTMPFLFCDTESN
CRYASRNDYSYWLSTDTPMPANMVSITGDKLASYISRCTVCETTSNVIAIHSQTARIPQC
PQGWESLWTGYSFVMQTGAGAGGSSQPLASPGSCLEMFRQVPFVECHGRGTCNYYPDSYS
YWLASLDPNNMFSKPVPQTVKGPFLPNVISRCRVCRKPFHSPGSGGGRGDSF
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggccggtgctcgtagttcctctgctcttgtttgctgtgatgctgatgggcacc
agggccaaaaattgtgtgtgcaatggaagatccaggtgccgttgtgaaggagtgaaaggc
aacaggggagacaaaggttatgcaggaatccaaggtcccccaggactagagggtcgtcca
ggaccaggtggccatgttgggccaaaagggccaaagggaaacaccgggcctgctggacct
atgggatcaaaaggagatccgggacctgaaggtaaagaaggatttgctgggtctcacggt
ttaccgggtatcccaggtttacaaggacttccaggccctccaggtgccccaggatgcaat
ggaactgatggtgaggatggacctcctggtattcctggtactgatggcttttatggacat
tcaggtccaccgggtctgcctggacctaagggtgaatctcgggtgtcagaaaatttagta
gggcaccctgggccaccagggtgggatggagaactgggagcccgaggtccccctggggag
actggaccacctggggaccatggaccaagaggctctattggtcatcctggcaatctaggg
gctaagggacctaagggtcaaggaggcgtaggtggtatcccaggactacgtggaccaaag
gggagaccaggaccacaaggagtgccggggccaccgggtcgaataaaagagtatttcact
gagatagagccactgattgagggtctaaaaggaaataaaggagatggtggagaaaaaggc
tgcaagggcgaaccaggaggaaatggttacagtattcacatcaaggggtctaagggagac
agaggagcgcaaggcccagaaggaaagccagggaaggacggtgatcctggacagcttgga
tataagggaaatactggccacagtggcgatccaggttttccagggacaccaggatggaca
ggtgaaaaaggaaatataggtccacctggtccgcctggagagataattagccatgtgact
gagccaccgaaaggataccgtggagatcctggtctccctggtccacctggacttcccggg
agtagaggttttgtgggctttcctgggccagatggccttccaggccgtgcatctgggatt
ggtataccaggtccacacggtcccagtggctttccaggccccaagggagaacctggggag
cctgggcatatgtatactggactcccaggtctagatggggaccctggtgatcaagggcct
ccaggagatcagggcccacctggaccaccagaagaccgaaacaacaggataaccaaaggt
cttcctggtataaaaggaatgaagggtatacctggacccatcgggtatgatgggacattt
ggaatgaaaggactgaagggggagccttgttatgagtgtataggaccaggactccccgga
tcaccaggtcctcctggtccacctggcattcctggctacaatcaaggaccaggtgccaaa
ggtgatccaggattcccaggacctagtggtttacctggaagaccaggtcctattggtgaa
actggactcccaggtgccccgggacgaaaaggagatgctcattcatataacaccccaggg
ataaagggagagagaggggacccaggacaacctggccagcctggtgcaaatggtttacct
gggttgcatggtttaccaggtcgcaaaggtaaccaaggccctccaggggatttgtatcct
tttccgggagaccgcggattaacaggtgcaccagggctctcaggtagatcagggccagtt
ggcctccctgggccagtaggatatgggcctcctggactatcaggcagtaagggagatgtt
ggtgttcctggtttgccaggacagcctggaattccaggccagaaaggggaacctagccac
tttcatgctaaaggccccccaggaccacaaggatttaaaggtctgccaggatcacctgga
aacccaggttatccaggagttccaggctccccaggagcaccaggagcactaggacagaaa
ggcgaaagaggacatctgtcatttcctggaaagcaggggacccaaggaggaaaaggtgaa
aaaggaaagccaggtctcccaggttatccaggtagaggtttgcctggccagcctgggcct
caaggccctcccggtgctccaggactgaagggtaatagtggccctggaaaaactggaccc
ccgggcttcccagggcctatgggtgaacctggagctcaggggactataggtgatccaggg
actcctggtctacctgggaaaacagggccaactggcaaccctggtttcccaggagaaaaa
ggaagtaaaggttctgtagggcccccaggactacctggtagcaagggttcatgtacagat
ttacctggacctgcaggaccagcaggaccagatggtttgccaggagttccagggagtaat
ggatttcctggtgagaagggaggtcaaggatttccagggtcaggccattctggtccccat
ggagagcctggtttccctgggccatcagtgccaggttcatatgggcttcctggacaaaaa
ggaattaagggacaaaatggcctgcctggtcagcaaggactgaggggagatcctggacca
gacggattaccaggatatggaccagatggattgcctggacctatagggccaccaggccta
ataggttcccctgggccagccggagccaaaggttcccggggtcctacaggcataaatgga
gaaccaggtttcagaggtcctaaaggccctccatcaccaccaccacacacagaccttatt
gggccccaaggagaccctggcactccaggcgatcctggtaaaagtggtccctctggagat
cctggaattactggcgcaaaaggactaagagggagagaaggcgcagtaggtgttcctgga
ctaagaggtcctccaggtgatccaggtattgatggaccagtgttctcaaaaggaactcaa
ggacctgctggagacccaggagacccaggagtcagagggcctaatggccttaaaggtttt
aaaggagatcaaggaattgtgggagctacaggtccatctggtgcacccggtccaaatgga
tacaagggaattgagggagaaccatgcgactgcgaacatggactacctggaccagtagga
caaaagggtgaaccaggattagccaacacttatgaaatgaagggtcagaaaggagagcct
ggtatcagtggaacagtaggagtaccaggaagccgtggagtcaaaggaaacccaggacct
gttggagaaattggtccacccggctatcaagggcctaaaggatcagatggaccaccagga
caaaaaggacaaccaggacctaatggaccattaggttacccaggtccacccggtgcccgt
ggttatccaggtcctaaaggcaaccagggccgggatgggatccctggaccaccaggacag
aaaggggatatcataacagaagtgactccggggcgacgtggtgacacaggccaaccaggg
ccacctgggaaccctggacctcctggcttgtctgtcacagcaagtcctggtccaagtgga
gacagaggacagccaggtccacatggggctaatggtccaagaggaccacccggacgagaa
ggggcatgcgtacctggtctaaaaggaaatcgtggccctcctgggagtcctggcagacca
ggctggccgggttcacctggccctccaggcctcagtttacctgggtttaaaggagacaga
gggaacatgggtcttacaggaagcccaggttatattggaccaccaggagatccaggacct
caaggaccacaaggtgcaaaaggcggacctggcagcccagggccaaaaggttattctggt
cctcctggaatccaagggcgtccaggtggcagtggagaccctggatacacaccaggcccg
tctggtccacctggacccaaaggtttccctggacgacctggccgtaagggtgaaccagta
ctcatcgcagcaatacatgagcgaggacctcctggtttacctggtccccctggtaatcaa
ggatccccagggagcactggatcatcgggaccaacaggctttccaggcaagccaggctta
aaaggagtgcgaggttccagcccaattggccttcctggttttcctggcgttaaaggagag
aaaggaagagcaggacttccaggtccagatggtagatctggggacccaggccacaagggt
cttccagggttgcccggtacagctcttccatgtgatgttgacactttcatgatagccaga
cacagtcagagcatccatgtccccgactgtcctcgtggctctactttcatttactctggt
tactcccttctcttcatcaacggaaataaacggactcacggtcaggaccttggcacaatg
ggaagctgtctcccccgtttctccaccatgcccttcctgttctgtgacacagagagtaac
tgtcgctatgcttctcgtaatgactattcatactggttgtcgactgacactcctatgcct
gccaacatggtttccatcacaggggataagctggcctcctacattagcaggtgcacggtg
tgtgaaaccacttccaatgtcatagctatccatagccagacagctcggataccccagtgt
ccccaaggatgggagtccctgtggactggctactcttttgtcatgcaaacaggtgctggt
gcaggtggctcctctcagcctttggcttctcctggctcatgtctggaaatgttccgccaa
gtgccctttgttgagtgtcatggcaggggaacatgtaactactatcctgactcctatagc
tactggctggcctcccttgaccccaacaacatgttcagtaaacctgttcctcagacagtg
aagggaccttttctaccaaacgtcatcagccgctgtcgggtctgtagaaaacctttccat
tcgcctggttcaggtggcggacgtggggacagtttttaa
DBGET
integrated database retrieval system