Solea solea (common sole): 131471303 Help Entry 131471303         CDS       T10853                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism ssoe  Solea solea (common sole) Pathway ssoe04382   Cornified envelope formation ssoe04510   Focal adhesion ssoe04512   ECM-receptor interaction ssoe04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ssoe00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     131471303  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     131471303   09142 Cell motility    04820 Cytoskeleton in muscle cells     131471303  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     131471303  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ssoe04147]     131471303    00536 Glycosaminoglycan binding proteins [BR:ssoe00536]     131471303 Exosome [BR:ssoe04147]  Exosomal proteins   Exosomal proteins of other cancer cells    131471303 Glycosaminoglycan binding proteins [BR:ssoe00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    131471303 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  131471303 NCBI-ProteinID:  XP_058503789 LinkDB All DBs Position 1:11823108..11846390 Genome browser AA seq 1672 aa AA seqDB search MGRPVLVVPLLLFAVMLMGTRAKNCVCNGRSRCRCEGVKGNRGDKGYAGIQGPPGLEGRP GPGGHVGPKGPKGNTGPAGPMGSKGDPGPEGKEGFAGSHGLPGIPGLQGLPGPPGAPGCN GTDGEDGPPGIPGTDGFYGHSGPPGLPGPKGESRVSENLVGHPGPPGWDGELGARGPPGE TGPPGDHGPRGSIGHPGNLGAKGPKGQGGVGGIPGLRGPKGRPGPQGVPGPPGRIKEYFT EIEPLIEGLKGNKGDGGEKGCKGEPGGNGYSIHIKGSKGDRGAQGPEGKPGKDGDPGQLG YKGNTGHSGDPGFPGTPGWTGEKGNIGPPGPPGEIISHVTEPPKGYRGDPGLPGPPGLPG SRGFVGFPGPDGLPGRASGIGIPGPHGPSGFPGPKGEPGEPGHMYTGLPGLDGDPGDQGP PGDQGPPGPPEDRNNRITKGLPGIKGMKGIPGPIGYDGTFGMKGLKGEPCYECIGPGLPG SPGPPGPPGIPGYNQGPGAKGDPGFPGPSGLPGRPGPIGETGLPGAPGRKGDAHSYNTPG IKGERGDPGQPGQPGANGLPGLHGLPGRKGNQGPPGDLYPFPGDRGLTGAPGLSGRSGPV GLPGPVGYGPPGLSGSKGDVGVPGLPGQPGIPGQKGEPSHFHAKGPPGPQGFKGLPGSPG NPGYPGVPGSPGAPGALGQKGERGHLSFPGKQGTQGGKGEKGKPGLPGYPGRGLPGQPGP QGPPGAPGLKGNSGPGKTGPPGFPGPMGEPGAQGTIGDPGTPGLPGKTGPTGNPGFPGEK GSKGSVGPPGLPGSKGSCTDLPGPAGPAGPDGLPGVPGSNGFPGEKGGQGFPGSGHSGPH GEPGFPGPSVPGSYGLPGQKGIKGQNGLPGQQGLRGDPGPDGLPGYGPDGLPGPIGPPGL IGSPGPAGAKGSRGPTGINGEPGFRGPKGPPSPPPHTDLIGPQGDPGTPGDPGKSGPSGD PGITGAKGLRGREGAVGVPGLRGPPGDPGIDGPVFSKGTQGPAGDPGDPGVRGPNGLKGF KGDQGIVGATGPSGAPGPNGYKGIEGEPCDCEHGLPGPVGQKGEPGLANTYEMKGQKGEP GISGTVGVPGSRGVKGNPGPVGEIGPPGYQGPKGSDGPPGQKGQPGPNGPLGYPGPPGAR GYPGPKGNQGRDGIPGPPGQKGDIITEVTPGRRGDTGQPGPPGNPGPPGLSVTASPGPSG DRGQPGPHGANGPRGPPGREGACVPGLKGNRGPPGSPGRPGWPGSPGPPGLSLPGFKGDR GNMGLTGSPGYIGPPGDPGPQGPQGAKGGPGSPGPKGYSGPPGIQGRPGGSGDPGYTPGP SGPPGPKGFPGRPGRKGEPVLIAAIHERGPPGLPGPPGNQGSPGSTGSSGPTGFPGKPGL KGVRGSSPIGLPGFPGVKGEKGRAGLPGPDGRSGDPGHKGLPGLPGTALPCDVDTFMIAR HSQSIHVPDCPRGSTFIYSGYSLLFINGNKRTHGQDLGTMGSCLPRFSTMPFLFCDTESN CRYASRNDYSYWLSTDTPMPANMVSITGDKLASYISRCTVCETTSNVIAIHSQTARIPQC PQGWESLWTGYSFVMQTGAGAGGSSQPLASPGSCLEMFRQVPFVECHGRGTCNYYPDSYS YWLASLDPNNMFSKPVPQTVKGPFLPNVISRCRVCRKPFHSPGSGGGRGDSF NT seq 5019 nt NT seq  +upstreamnt  +downstreamnt atgggaaggccggtgctcgtagttcctctgctcttgtttgctgtgatgctgatgggcacc agggccaaaaattgtgtgtgcaatggaagatccaggtgccgttgtgaaggagtgaaaggc aacaggggagacaaaggttatgcaggaatccaaggtcccccaggactagagggtcgtcca ggaccaggtggccatgttgggccaaaagggccaaagggaaacaccgggcctgctggacct atgggatcaaaaggagatccgggacctgaaggtaaagaaggatttgctgggtctcacggt ttaccgggtatcccaggtttacaaggacttccaggccctccaggtgccccaggatgcaat ggaactgatggtgaggatggacctcctggtattcctggtactgatggcttttatggacat tcaggtccaccgggtctgcctggacctaagggtgaatctcgggtgtcagaaaatttagta gggcaccctgggccaccagggtgggatggagaactgggagcccgaggtccccctggggag actggaccacctggggaccatggaccaagaggctctattggtcatcctggcaatctaggg gctaagggacctaagggtcaaggaggcgtaggtggtatcccaggactacgtggaccaaag gggagaccaggaccacaaggagtgccggggccaccgggtcgaataaaagagtatttcact gagatagagccactgattgagggtctaaaaggaaataaaggagatggtggagaaaaaggc tgcaagggcgaaccaggaggaaatggttacagtattcacatcaaggggtctaagggagac agaggagcgcaaggcccagaaggaaagccagggaaggacggtgatcctggacagcttgga tataagggaaatactggccacagtggcgatccaggttttccagggacaccaggatggaca ggtgaaaaaggaaatataggtccacctggtccgcctggagagataattagccatgtgact gagccaccgaaaggataccgtggagatcctggtctccctggtccacctggacttcccggg agtagaggttttgtgggctttcctgggccagatggccttccaggccgtgcatctgggatt ggtataccaggtccacacggtcccagtggctttccaggccccaagggagaacctggggag cctgggcatatgtatactggactcccaggtctagatggggaccctggtgatcaagggcct ccaggagatcagggcccacctggaccaccagaagaccgaaacaacaggataaccaaaggt cttcctggtataaaaggaatgaagggtatacctggacccatcgggtatgatgggacattt ggaatgaaaggactgaagggggagccttgttatgagtgtataggaccaggactccccgga tcaccaggtcctcctggtccacctggcattcctggctacaatcaaggaccaggtgccaaa ggtgatccaggattcccaggacctagtggtttacctggaagaccaggtcctattggtgaa actggactcccaggtgccccgggacgaaaaggagatgctcattcatataacaccccaggg ataaagggagagagaggggacccaggacaacctggccagcctggtgcaaatggtttacct gggttgcatggtttaccaggtcgcaaaggtaaccaaggccctccaggggatttgtatcct tttccgggagaccgcggattaacaggtgcaccagggctctcaggtagatcagggccagtt ggcctccctgggccagtaggatatgggcctcctggactatcaggcagtaagggagatgtt ggtgttcctggtttgccaggacagcctggaattccaggccagaaaggggaacctagccac tttcatgctaaaggccccccaggaccacaaggatttaaaggtctgccaggatcacctgga aacccaggttatccaggagttccaggctccccaggagcaccaggagcactaggacagaaa ggcgaaagaggacatctgtcatttcctggaaagcaggggacccaaggaggaaaaggtgaa aaaggaaagccaggtctcccaggttatccaggtagaggtttgcctggccagcctgggcct caaggccctcccggtgctccaggactgaagggtaatagtggccctggaaaaactggaccc ccgggcttcccagggcctatgggtgaacctggagctcaggggactataggtgatccaggg actcctggtctacctgggaaaacagggccaactggcaaccctggtttcccaggagaaaaa ggaagtaaaggttctgtagggcccccaggactacctggtagcaagggttcatgtacagat ttacctggacctgcaggaccagcaggaccagatggtttgccaggagttccagggagtaat ggatttcctggtgagaagggaggtcaaggatttccagggtcaggccattctggtccccat ggagagcctggtttccctgggccatcagtgccaggttcatatgggcttcctggacaaaaa ggaattaagggacaaaatggcctgcctggtcagcaaggactgaggggagatcctggacca gacggattaccaggatatggaccagatggattgcctggacctatagggccaccaggccta ataggttcccctgggccagccggagccaaaggttcccggggtcctacaggcataaatgga gaaccaggtttcagaggtcctaaaggccctccatcaccaccaccacacacagaccttatt gggccccaaggagaccctggcactccaggcgatcctggtaaaagtggtccctctggagat cctggaattactggcgcaaaaggactaagagggagagaaggcgcagtaggtgttcctgga ctaagaggtcctccaggtgatccaggtattgatggaccagtgttctcaaaaggaactcaa ggacctgctggagacccaggagacccaggagtcagagggcctaatggccttaaaggtttt aaaggagatcaaggaattgtgggagctacaggtccatctggtgcacccggtccaaatgga tacaagggaattgagggagaaccatgcgactgcgaacatggactacctggaccagtagga caaaagggtgaaccaggattagccaacacttatgaaatgaagggtcagaaaggagagcct ggtatcagtggaacagtaggagtaccaggaagccgtggagtcaaaggaaacccaggacct gttggagaaattggtccacccggctatcaagggcctaaaggatcagatggaccaccagga caaaaaggacaaccaggacctaatggaccattaggttacccaggtccacccggtgcccgt ggttatccaggtcctaaaggcaaccagggccgggatgggatccctggaccaccaggacag aaaggggatatcataacagaagtgactccggggcgacgtggtgacacaggccaaccaggg ccacctgggaaccctggacctcctggcttgtctgtcacagcaagtcctggtccaagtgga gacagaggacagccaggtccacatggggctaatggtccaagaggaccacccggacgagaa ggggcatgcgtacctggtctaaaaggaaatcgtggccctcctgggagtcctggcagacca ggctggccgggttcacctggccctccaggcctcagtttacctgggtttaaaggagacaga gggaacatgggtcttacaggaagcccaggttatattggaccaccaggagatccaggacct caaggaccacaaggtgcaaaaggcggacctggcagcccagggccaaaaggttattctggt cctcctggaatccaagggcgtccaggtggcagtggagaccctggatacacaccaggcccg tctggtccacctggacccaaaggtttccctggacgacctggccgtaagggtgaaccagta ctcatcgcagcaatacatgagcgaggacctcctggtttacctggtccccctggtaatcaa ggatccccagggagcactggatcatcgggaccaacaggctttccaggcaagccaggctta aaaggagtgcgaggttccagcccaattggccttcctggttttcctggcgttaaaggagag aaaggaagagcaggacttccaggtccagatggtagatctggggacccaggccacaagggt cttccagggttgcccggtacagctcttccatgtgatgttgacactttcatgatagccaga cacagtcagagcatccatgtccccgactgtcctcgtggctctactttcatttactctggt tactcccttctcttcatcaacggaaataaacggactcacggtcaggaccttggcacaatg ggaagctgtctcccccgtttctccaccatgcccttcctgttctgtgacacagagagtaac tgtcgctatgcttctcgtaatgactattcatactggttgtcgactgacactcctatgcct gccaacatggtttccatcacaggggataagctggcctcctacattagcaggtgcacggtg tgtgaaaccacttccaatgtcatagctatccatagccagacagctcggataccccagtgt ccccaaggatgggagtccctgtggactggctactcttttgtcatgcaaacaggtgctggt gcaggtggctcctctcagcctttggcttctcctggctcatgtctggaaatgttccgccaa gtgccctttgttgagtgtcatggcaggggaacatgtaactactatcctgactcctatagc tactggctggcctcccttgaccccaacaacatgttcagtaaacctgttcctcagacagtg aagggaccttttctaccaaacgtcatcagccgctgtcgggtctgtagaaaacctttccat tcgcctggttcaggtggcggacgtggggacagtttttaa

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