Entry |
|
Symbol |
ndc1
|
Name |
(RefSeq) nucleoporin NDC1
|
KO |
|
Organism |
ssoe Solea solea (common sole)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ssoe00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131471349 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ssoe03019]
131471349 (ndc1)
Messenger RNA biogenesis [BR:ssoe03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131471349 (ndc1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:complement(45982661..45993561)
|
AA seq |
669 aa
MFSTEQSCWFIRKVICWRAAASIAWAVLLLPPITAVFVILSRFSLLHPIHTISECFSLLM
SASAIFSFILLCGVIIMVGFLNLEYYTVIPTIACSKIAMFGQLLHPRQFVNTLVHCIMGI
IVAWCCAVTIGGRYETLGYTCTQSDGSTQMCLNEYHLILLLAGVFVGFSHSLLGVIYNMN
YVSFTTVQQYKYLRFKGSLPLVVKCSATQALYSIRNYIVVYFFLGHIPRAWICKTLNLHL
NSSIHTLDSIAGLLDLSLLYHMWISATFLLFTWYITLLLFRIFVTEVYSFPVQSSFTEDA
HQCLPKVLSEKQSVIVKFLALQDLALLSQHSPSRRCEVFSLSQPGGHPHNWNSISRECLS
LLADLTQRLVAYHDTVATNGRAKSLSTGSERKSSSETSVTSGTEEFMSPRHTLLMKTPAS
VFARSIGRGQQSPLTAPFTPELDSPFTSPSLRRLTAPLEQCSPWYGTVQSPHIMRRAPKL
WSASTDSQINGSCPPSPASVPSPQQETSKPSLLTQFLQNRKEQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSCMLGLQEAVDRH
FKLPHASSKPLRWSSSMSDSTYKTLRFALRATLKTAIYRITTTFGDHLNAVQMSTEHQKR
LQQFLEYKE |
NT seq |
2010 nt +upstreamnt +downstreamnt
atgttttcaacagagcaaagttgctggtttatccgcaaggtgatttgctggagagccgca
gctagtattgcgtgggccgtgctgttgttgccacccatcacagcagtttttgtaatcctc
agcaggttcagtcttctccaccccatccataccatatcagaatgcttctccttgctaatg
agtgccagtgccatattctctttcatcctgctgtgtggggtgatcatcatggtgggcttc
ctgaacctggagtattatacagtcatcccaactattgcatgctcaaaaatcgccatgttt
ggacaactgctgcaccctcgtcagtttgtcaacaccctggtccattgcatcatgggaata
attgtggcttggtgttgtgctgtcacaatcgggggcagatacgagacgcttggctacaca
tgcacacagagcgatggttcaactcagatgtgtctgaatgagtatcacctcatccttctg
ctcgctggagtctttgttggattttctcacagtctgctgggtgtgatctacaacatgaac
tatgtctccttcaccactgttcagcaatacaaataccttcgcttcaagggatcactgcct
ttagtggtgaaatgcagtgccacacaagcactatactctatcaggaactacattgttgtg
tatttctttttgggacacattccaagagcatggatctgtaaaacactgaatcttcatttg
aacagctccatccacactcttgacagcatagctggactgctggacctctctctgctctac
cacatgtggatcagtgccaccttccttctctttacgtggtacatcacactgctgctcttt
aggatctttgtcactgaggtttacagttttcctgtgcaatcgtcctttaccgaagatgcc
caccagtgtcttcctaaagttctgtctgaaaagcagtcagtgatagtaaagttcctagct
ctgcaggacctggctctgctgtctcaacactctccatcgcgacgctgtgaggtcttcagt
ctgagtcagccaggtggccatcctcataactggaactccatcagtcgggagtgtctgtcc
ttgttggctgatctgacccagagacttgtagcttatcatgacaccgtggcaaccaatggc
agggccaaatcactgtctacagggagtgaaaggaaatcttcatctgagacatcagtaaca
tcaggtacagaagagtttatgtctccgaggcacactctgctgatgaaaactccagcttca
gtctttgcccgctccatcggcagaggccaacagagtcctctgactgcaccattcactcca
gagctcgacagtcccttcacttcaccatccctgcgacgcctcaccgctccactcgagcag
tgctcaccttggtacggcacggtgcagagcccgcatatcatgaggagagcgccaaaactc
tggtccgcctccacagattcacagattaatggcagttgcccaccgtcccctgcctcagtt
cccagtccccagcaggaaacctccaaacccagtctcctcactcagttcctccagaacaga
aaagaacaggttaaaaatttcttggcaaagcgggtgctgataatgtatttgtttaacaag
cttccagaggcttccagtcaggctctctttgctgacagccaggctcacatctgggcgtta
gaaggactgtcctatcttgttcaggcctccttctcagaagaccaatttggggttgtacag
actacattacccagcattctcagctgtatgctgggcctacaagaggctgtcgatcgccac
ttcaagctgcctcacgcctccagtaaacccctcaggtggagcagcagcatgagtgactcc
acttacaaaacactgcgatttgctctcagagccacgctcaagactgccatctacagaata
acaaccacttttggtgatcacttaaatgctgtccagatgtctacagagcaccagaagaga
ctgcagcagtttctggagtataaggaatga |