Entry
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
Organism
ssoe Solea solea (common sole)
Pathway
Brite
Messenger RNA biogenesis [BR:ssoe03019 ]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131471349 (ndc1)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
1:complement(45982661..45993561)
Genome browser
AA seq
669 aa AA seq DB search
MFSTEQSCWFIRKVICWRAAASIAWAVLLLPPITAVFVILSRFSLLHPIHTISECFSLLM
SASAIFSFILLCGVIIMVGFLNLEYYTVIPTIACSKIAMFGQLLHPRQFVNTLVHCIMGI
IVAWCCAVTIGGRYETLGYTCTQSDGSTQMCLNEYHLILLLAGVFVGFSHSLLGVIYNMN
YVSFTTVQQYKYLRFKGSLPLVVKCSATQALYSIRNYIVVYFFLGHIPRAWICKTLNLHL
NSSIHTLDSIAGLLDLSLLYHMWISATFLLFTWYITLLLFRIFVTEVYSFPVQSSFTEDA
HQCLPKVLSEKQSVIVKFLALQDLALLSQHSPSRRCEVFSLSQPGGHPHNWNSISRECLS
LLADLTQRLVAYHDTVATNGRAKSLSTGSERKSSSETSVTSGTEEFMSPRHTLLMKTPAS
VFARSIGRGQQSPLTAPFTPELDSPFTSPSLRRLTAPLEQCSPWYGTVQSPHIMRRAPKL
WSASTDSQINGSCPPSPASVPSPQQETSKPSLLTQFLQNRKEQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSCMLGLQEAVDRH
FKLPHASSKPLRWSSSMSDSTYKTLRFALRATLKTAIYRITTTFGDHLNAVQMSTEHQKR
LQQFLEYKE
NT seq
2010 nt NT seq +upstream nt +downstream nt
atgttttcaacagagcaaagttgctggtttatccgcaaggtgatttgctggagagccgca
gctagtattgcgtgggccgtgctgttgttgccacccatcacagcagtttttgtaatcctc
agcaggttcagtcttctccaccccatccataccatatcagaatgcttctccttgctaatg
agtgccagtgccatattctctttcatcctgctgtgtggggtgatcatcatggtgggcttc
ctgaacctggagtattatacagtcatcccaactattgcatgctcaaaaatcgccatgttt
ggacaactgctgcaccctcgtcagtttgtcaacaccctggtccattgcatcatgggaata
attgtggcttggtgttgtgctgtcacaatcgggggcagatacgagacgcttggctacaca
tgcacacagagcgatggttcaactcagatgtgtctgaatgagtatcacctcatccttctg
ctcgctggagtctttgttggattttctcacagtctgctgggtgtgatctacaacatgaac
tatgtctccttcaccactgttcagcaatacaaataccttcgcttcaagggatcactgcct
ttagtggtgaaatgcagtgccacacaagcactatactctatcaggaactacattgttgtg
tatttctttttgggacacattccaagagcatggatctgtaaaacactgaatcttcatttg
aacagctccatccacactcttgacagcatagctggactgctggacctctctctgctctac
cacatgtggatcagtgccaccttccttctctttacgtggtacatcacactgctgctcttt
aggatctttgtcactgaggtttacagttttcctgtgcaatcgtcctttaccgaagatgcc
caccagtgtcttcctaaagttctgtctgaaaagcagtcagtgatagtaaagttcctagct
ctgcaggacctggctctgctgtctcaacactctccatcgcgacgctgtgaggtcttcagt
ctgagtcagccaggtggccatcctcataactggaactccatcagtcgggagtgtctgtcc
ttgttggctgatctgacccagagacttgtagcttatcatgacaccgtggcaaccaatggc
agggccaaatcactgtctacagggagtgaaaggaaatcttcatctgagacatcagtaaca
tcaggtacagaagagtttatgtctccgaggcacactctgctgatgaaaactccagcttca
gtctttgcccgctccatcggcagaggccaacagagtcctctgactgcaccattcactcca
gagctcgacagtcccttcacttcaccatccctgcgacgcctcaccgctccactcgagcag
tgctcaccttggtacggcacggtgcagagcccgcatatcatgaggagagcgccaaaactc
tggtccgcctccacagattcacagattaatggcagttgcccaccgtcccctgcctcagtt
cccagtccccagcaggaaacctccaaacccagtctcctcactcagttcctccagaacaga
aaagaacaggttaaaaatttcttggcaaagcgggtgctgataatgtatttgtttaacaag
cttccagaggcttccagtcaggctctctttgctgacagccaggctcacatctgggcgtta
gaaggactgtcctatcttgttcaggcctccttctcagaagaccaatttggggttgtacag
actacattacccagcattctcagctgtatgctgggcctacaagaggctgtcgatcgccac
ttcaagctgcctcacgcctccagtaaacccctcaggtggagcagcagcatgagtgactcc
acttacaaaacactgcgatttgctctcagagccacgctcaagactgccatctacagaata
acaaccacttttggtgatcacttaaatgctgtccagatgtctacagagcaccagaagaga
ctgcagcagtttctggagtataaggaatga