Solea solea (common sole): 131471478
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Entry
131471478 CDS
T10853
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131471478 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssoe03310
]
131471478 (rorc)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
131471478 (rorc)
Nuclear receptors [BR:
ssoe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
131471478 (rorc)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Spt20_SEP
VPS13_M
TFIIA
DUF2956
Motif
Other DBs
NCBI-GeneID:
131471478
NCBI-ProteinID:
XP_058504035
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Position
13:complement(8457557..8480465)
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AA seq
538 aa
AA seq
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MFSNACADPGARTTNRVSQCSEKRVMDYEEADVSPADTPIIRRGGALSKKTHLTQIEVIP
CKICGDKSSGVHYGVITCEGCKGFFRRSQLPSVSYSCSRQSNCQIDRASRNRCQHCRLQK
CLAQGMSKDAVKFGRMSKSQRDSLIAEVDKHRQQQQQQQQQQQQQRQQQLQGDAQSVLSF
PNKARQDRSSQLLQPMTSAYSFPGDAELLSYTADVHPYLVYSANESQGLIYRSSSISPTS
RSQSRGGNSGHPDIRGFESRQPPHDLMALHPYSSLEESYSIYSHSLRNIDELCASIVRSH
RETSQYRVEELQALKWKLFSREEIQAYQSKSEDDMWQHCAIQLTDAVQYVVEFAKHIPGF
RTLSQNDQIALLKTGSMEVVLVRMSRSFNTENNTVFFDGKFAGIEVFKSLVCGDLITAVF
DFAHDMCALKLTEQQIALFSALVLINADRPCLEDRSRVQRVQRGVELGLTHILHRDNQES
LLNKLYQRMAVLRSLCLLHMQNLLWFSQRYPHTAHSLFPPLYKELFASEAELLPGTTH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaatgcctgcgccgacccgggcgctagaaccaccaacagggtttcccagtgt
tctgaaaagagagtaatggactatgaagaggctgacgtgtcccccgctgacacccccatc
atcagaagaggaggagctttgtccaagaaaacacatctgacccagattgaagttattccg
tgcaagatctgcggtgataagtcgtcaggagtgcattatggagtcatcacgtgtgaaggc
tgcaagggatttttccggcgcagccagctgccctctgtgtcctactcctgctcccggcag
agtaactgtcagattgaccgggccagccgaaaccgctgccagcactgccgtctgcagaag
tgcttggcacagggcatgagcaaagatgctgtgaagtttggacggatgtccaaaagccag
cgcgattctctgattgctgaagtggataagcaccgtcagcagcagcagcagcagcaacag
cagcagcagcagcagcggcagcagcagcttcagggagatgcccagtctgtgttgtccttc
cccaacaaagccagacaagaccgctcgtcccagctccttcagcccatgacttcggcctat
tccttccccggtgatgccgagctgctgtcctacactgctgatgtccatccttacctggtg
tactctgcaaacgagtcgcaggggctgatctacagaagctccagcatctccccaacctcc
agatcccagagtaggggaggcaacagtggacaccctgacataagaggatttgagtcgagg
cagccaccccatgatctgatggcgcttcatccctacagctctctggaggagtcttacagt
atttattctcactctctgcgaaacatagatgagctttgtgccagcattgtgcgttcccac
cgagagaccagccagtacagagtggaggagctgcaggctctcaaatggaaactcttcagc
agagaggagattcaggcctaccagagcaaatccgaggatgacatgtggcagcactgtgcg
attcaactgaccgatgccgtgcagtatgtggtggagtttgcaaaacacatcccaggtttc
cgcacactcagccagaatgaccagattgccttgctgaagacaggctccatggaggtagtt
ctggtcaggatgagtcgctctttcaacacagagaacaacacggttttctttgacgggaaa
tttgctggaattgaagtgttcaagtctttggtgtgtggtgatttgatcacagcggtgttt
gactttgctcatgacatgtgtgctctgaagctcacggagcagcagatcgctctcttcagt
gctctggtgctgatcaacgcagaccgaccatgtctggaggacaggagcagggtccagcga
gtacaaagaggcgtggagttaggactcacacacattctacaccgagacaaccaagaaagt
ctcttgaacaagctctaccagaggatggcagtgttacgctcactatgccttcttcacatg
cagaatctgctttggttcagtcagcgttacccccacactgctcactccctgttccctccg
ctctacaaggagctgttcgcctctgaggcagagctgctgccagggaccactcactga
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