Solea solea (common sole): 131471815
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Entry
131471815 CDS
T10853
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131471815
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
131471815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
131471815
NCBI-ProteinID:
XP_058504566
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Position
13:complement(3518245..3526876)
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AA seq
600 aa
AA seq
DB search
MDQVLPSRTSPSGLLEPDSEELQLRVDSFRKLGYSSEEVRSALRKLGLSTDTNSVLGELV
RSRTSTVPSSDGDDRRTGPKDALLPPSWVLGSRFTLQPGHQKNMEAELRPVVIDGSNVAM
SHGNKEVFSCRGIQLAVNYFLDRGHSTITVFVPSWRKEQPRPDAPITDQHILMELEKRKI
VVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERPEWKKCIEERLLMY
SFVNDKFMPPDDPLGRHGPSLDNFLRKKPLLTEQKRQLCPYDKKCTYGIKCKFYHPERVN
QSYLSLADELREKAQMSTSKEDKNARSSPRQVQIDTGPGPNASSHPRDSKADLSGDGQSS
CISRISENQMYWEDPRNGSNLISLGLSSVPNHRYGNISHEYLDSGFGSFESQYSNHSHCL
GNSLRPTSQQQPVHLGKNDSSHSCRGCSHAAPSTAHQQRHRSLDSNCQPNYPHMFPPSVP
QQHSLPSHLHYSGALHPQQNYWSDPFQGIPQSRTSCHLPPSHSHNSCSCSYRGHEYHSWG
QQQPSSAAAFDPERMELRKKLQAIFNPHQVDTVMEMFPHLMDAEKLAANILNLKAQGGIF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggtacttcccagccggacctcaccttcaggcctgctggaaccagacagtgag
gagctccagctcagagtggactccttcaggaaactgggttattcttcagaggaggtcagg
tctgctctgaggaagctggggctcagcacagacaccaactcagtgctcggagagctggtg
aggagcaggaccagcactgtgcccagctctgatggtgacgacaggagaacaggaccaaag
gatgctctcttgcctcccagttgggtccttggatccagattcacactgcaaccaggtcac
caaaagaacatggaagcagaattgaggcctgtggttattgacggcagcaatgttgccatg
agtcatggcaacaaggaagtgttctcctgccgaggaatccagctggcagtgaattacttc
ctggaccgaggtcatagtaccattactgtgtttgttccgtcttggcgcaaagagcagccc
agacctgacgcccccatcacagatcaacacattctcatggagctggaaaagcgtaaaatt
gtggtcttcactccctcgcgtcgagtcgggggtaagagggtggtttgctacgatgaccgc
ttcattgtcaagctggcatacgagtcggacggagtgattgtatctaacgacacctatcgg
gacctccaaggagaaagacccgagtggaagaaatgcatagaggagaggctcctcatgtac
tcctttgtgaatgacaagttcatgccccctgatgacccgctgggtcgccacggccccagt
cttgacaacttcctcaggaaaaagcctctgcttacagagcagaagcgacagctctgtcca
tatgacaaaaagtgcacatatggcatcaaatgcaagttttaccatccggagcgagtaaac
cagtcctacctctctttggctgatgaactgagagagaaagcgcagatgtctacatcaaaa
gaagacaagaatgccagatcatcacccagacaggttcagattgatactgggcctggtcct
aatgcaagttcccatccccgagactcgaaagcagatctcagtggtgatgggcaaagttct
tgcattagtcgcattagtgaaaatcaaatgtactgggaggacccaagaaacggttcaaat
ctcatatcattaggtctgtcatcagtgcccaatcatcgctatggcaacatctctcatgag
tacctggattctggctttggctcttttgagagccagtactctaatcactcacactgcctt
ggcaactccctcaggcccacgtcccagcagcaacctgtgcatttagggaaaaatgacagc
agccactcgtgtagaggctgttcccatgcagctccctcaacagctcaccaacaacgacac
agaagcctggactctaactgtcaacccaactatcctcacatgttcccaccaagcgtgcca
caacaacacagtctccccagccatctccactatagtggagccctccatcctcagcaaaat
tactggtcagatcccttccaggggattccccaatccaggacatcatgtcatctcccacct
tcacactcccacaactcctgctcttgctcctacagaggccatgagtaccactcctggggc
caacagcagccgtcttctgctgctgctttcgacccagaaaggatggagctccgcaagaaa
ctgcaagccattttcaacccgcatcaggtggacacggtgatggagatgttcccacatctg
atggatgcggagaaactggccgcaaacattctgaacctgaaggcgcagggaggaatattc
tga
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