Solea solea (common sole): 131471818
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Entry
131471818 CDS
T10853
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
131471818 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131471818 (trip13)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
131471818 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_14
AAA_25
AAA_18
Viral_helicase1
AAA_24
AAA_5
NPHP3_N
TIP49
AAA_33
KAP_NTPase
AAA_28
AAA_17
RNA_helicase
TsaE
ATPase_2
NACHT
RuvB_N
Cytidylate_kin
ABC_tran
AAA_7
AAA_30
ATPase
AAA_11
DUF815
bpMoxR
IstB_IS21
SLFN-g3_helicase
AAA_19
Rad17
Mg_chelatase
DUF6393
PduV-EutP
NTPase_1
nSTAND1
Sigma54_activat
PhoH
AAA_3
Motif
Other DBs
NCBI-GeneID:
131471818
NCBI-ProteinID:
XP_058504569
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Position
13:9919356..9924495
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AA seq
440 aa
AA seq
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MNQRAEFDILLSGSNERRVMEMDGDRAEVGNINVEVHVKSHSTAKLSEVRMHILALLNRH
SMVFGNYRWTEFDEDFLRKNVESVAIVDIEEIVTQPLDLKSSSVSVHIFTLNEDQPSTLS
LEDDEELSAANHWLLPTAEFHGIWESLVYDSGVKTQLLDYVTTTVYFSDKNVDSNLISWN
RVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKM
FQKIQQLIDDKEALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHSN
VVILTTSNVTEKIDLAFVDRADIKQYIGPPSEKGIYNIYLSCLEELMKCQIIYPRQQLFT
MFELETMGFAESEVSEHSLKLRNIAVKSKGLSGRALRKLPFLAHALFVRSPTVTLERFLE
AMERAVAKQREEKSNLVNGF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcgcgctgaatttgacatactgctttctggcagcaacgagcggcgagtcatg
gagatggatggtgacagagcggaggtggggaacatcaacgtggaggttcatgttaagtca
cacagcactgctaaactgtcagaggtgaggatgcacattctggctctgctgaatcgccac
agcatggtttttggaaactacagatggacagagtttgacgaagactttctgaggaaaaat
gtggagtccgtggccatagtggatatcgaggaaatagtaacacagccccttgatttgaaa
agctcctctgtgtctgttcacatcttcacattgaacgaggatcaacccagcacactcagt
ttggaagacgacgaagagctttcagcagcaaatcactggctgttaccaacagctgaattc
catgggatttgggagagcctggtgtatgacagcggagtcaaaacacagctcctggattat
gtcactacaacagtttacttctcagacaaaaatgttgacagcaacctgatttcgtggaac
cgtgttgtgctgcttcatggaccgccaggtactgggaaaacatcattgtgcaaagctctt
gcccagaagctgacaatcagactgtcaagtcggtattcttatggccaatttgttgagata
aacagccacagcctgttctcaaagtggttctcagagagtggcaagctggtcacaaagatg
tttcaaaagatccaacaactcattgatgacaaagaagctctcgtgtttgtcctgatcgat
gaggtggagagtctgacagcagctagaaatgcctcccaggcaggaacagagccttctgac
gccattcgagtcgtcaattctgttctcacccaactggaccagatcaaacgacattcaaac
gttgtgatcttgacgacttccaatgtgacggagaagattgacttggcatttgtggacaga
gccgacatcaagcagtacattggacccccatctgagaaaggcatctacaatatctacctc
tcctgccttgaggagctgatgaagtgccagatcatctacccccggcagcagctgtttacc
atgtttgagctggagacgatgggctttgctgagagcgaggtgtctgaacacagtctgaag
ttgaggaacattgctgtaaaaagcaaaggtttaagtggaagagcactgaggaagttgcct
tttctcgcccatgcactgtttgtgaggtcgccgacagtgacccttgagaggtttctggag
gccatggagcgagcagtggctaaacaaagggaggaaaaatctaatctggtcaatgggttc
tga
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