Solea solea (common sole): 131471839
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Entry
131471839 CDS
T10853
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131471839
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131471839
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131471839
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
131471839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
131471839
NCBI-ProteinID:
XP_058504598
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All DBs
Position
13:12168178..12187415
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AA seq
616 aa
AA seq
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MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRRDAGNNPDFEETRKVFASKMTKIHMQKH
QEEMAKNHQAIKMNGGHSGAYYTKDRPPINSYRQPGEAAAKPPILSGPVSGTAGQYAPFD
GHKHHTGIQQELPAERAYGYGNSYDNKEPHSCQRNTPTPPSSPGNAPLSAPTHARHPVSQ
PSVWAPCRENQLPTSIPGSESCPAPQQQLIPAPPINTSLPPKQNQAVAPSMNQSPPSSAR
GWAAGELSGATQPDLISALPLSAFTGGADFHGHQEQQQPSTQPAAHYAPPSPTLRPPTSH
NGPATASLVHLAPSKTPHPKVQVASAVLNHGHASKNSSQGQGQSQTPSYGQATSAEPEVH
LCSPKSVQLPCQSLLAQPAELGPSSAEIKLETLTKRLEKEMDALPKADYFGACVKCNKAV
YGANQACQAMGSLYHDSCFTCSACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNA
CGHLIMDMILQALGKSYHPGCFRCVVCNESLDGVPFTVDTENKIYCVKDYHRVLAPKCAA
CKQPILPSEGSDETIRVVSMDKDYHVECYHCEDCKMELNDEEGHRCYPLNGHLLCHSCHL
KHMEPGCSSPVAADSF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggataaatatgaggatttggggctggaggcgagtaagttcatcgaggacctgaacatg
tatgaagcatcacgggatggcttgtttcgcacgaggagggatgcaggaaacaacccggac
tttgaggagacgcggaaagtctttgcctctaaaatgactaaaatccacatgcagaaacac
caagaggagatggcaaagaaccaccaggctattaagatgaatggcggtcatagcggtgcg
tattacaccaaagacaggccgcccatcaacagttacagacagccgggtgaagcggcggcg
aagcccccgatactctctggtcctgtgtcgggaaccgcgggtcagtatgctccgtttgac
ggccataaacaccacacaggcattcagcaggaactcccagcagaacgggcatatggctac
ggaaacagttacgataataaagagccacattcctgccagcgtaacactcctactcccccc
agcagcccaggaaacgcgcctctcagtgcgcccacacatgctcgacaccctgtcagtcag
ccgtcggtctgggccccgtgcagagagaaccagcttcccacatcgatacctggctctgag
agctgccctgcccctcagcagcagctaattcctgcaccccccatcaacactagtctccca
ccaaagcagaatcaggctgtggctccttctatgaaccagagtccaccctcctcagccaga
ggatgggctgctggagagctttctggagcaacccagccagacctcatctctgccctgcct
ctgagtgcctttacagggggagcagatttccatggtcaccaggagcagcagcagccctcc
acacagcctgcagcccattatgcaccaccttctccaactttaagaccccccactagccat
aatggtcctgcaacagcttcccttgtccatctagcaccgtctaaaacacctcatccaaag
gtgcaggtggcatctgctgtcttgaaccatggtcatgcctccaaaaacagcagccagggt
caaggtcagagccaaacacctagctatggacaggctaccagtgctgaacctgaagtccac
ctgtgttctcccaagtctgtccagcttccttgtcaatctctccttgcacaaccggctgaa
ctggggccttcatctgctgaaataaaattggaaactctcactaaacgtctggaaaaagaa
atggacgccctcccaaaggcagactactttggagcctgtgttaagtgtaacaaggcggtg
tatggagcaaaccaggcctgccaggccatgggtagcctctaccatgacagctgcttcacc
tgcagtgcctgtagtcgaagactcagagggaaagctttctactatgtcggagggaaggtt
ttctgtgaagaagacttcctgtactctggtttccagcagtctgcggacaagtgcaacgct
tgtggacatctgattatggacatgattctgcaggccctcgggaagtcctaccacccgggc
tgtttccgctgcgttgtctgtaatgaaagccttgatggagtgcccttcaccgtagacacc
gaaaataagatctactgtgtcaaagactaccacagagtcctggcccctaaatgtgccgcc
tgtaagcagcccatcctgccttcagagggatctgacgaaaccatccgtgttgtatccatg
gacaaagactatcatgtggaatgctaccactgtgaggattgtaagatggagctgaatgat
gaggagggtcaccgctgttaccctctgaacggccacctcctctgccactcctgccacctg
aaacacatggagcctggctgctcctctcctgtcgcagccgactccttctaa
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