Solea solea (common sole): 131472312
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Entry
131472312 CDS
T10853
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131472312 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131472312 (drosha)
03009 Ribosome biogenesis [BR:
ssoe03009
]
131472312 (drosha)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131472312 (drosha)
Enzymes [BR:
ssoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
131472312 (drosha)
Messenger RNA biogenesis [BR:
ssoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
131472312 (drosha)
Ribosome biogenesis [BR:
ssoe03009
]
Eukaryotic type
90S particles
RNase
131472312 (drosha)
Prokaryotic type
rRNA processing factors
131472312 (drosha)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
131472312 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
Motif
Other DBs
NCBI-GeneID:
131472312
NCBI-ProteinID:
XP_058505326
LinkDB
All DBs
Position
1:28945942..29067336
Genome browser
AA seq
1352 aa
AA seq
DB search
MSFHQDRGGPGGGGGMPPGQHGSPQSYRPPNLRAPPPPQPPLPPYHYDPQAPPSSGYHGN
SSYMPPRSDFMQYPPPVQSQAPSSLNQCPVRPTFPKPPVRQGFLDPPPNFPPPPLPSSTG
GQPGSSQNAYHPYMMPPVPPPPLPHPPVPHPMASQSMSYPSPYSMNYPHPPHPPFPPPTF
NPGYTQSPGSFKPDHSFRHGQFKYEKTMDNRRSSPERGYRHDDHRQKGYGYGGSGGHGDR
HKMELPADRKDHGRSPDRRVRPEGGRYRPEYDRGRTPPRHRSRDRSRERHRHRESLKSQS
PERHRKRPRSRSTSRDRKRGRWEEERDRRSESSSGLSRERSYASVRSRDSDEAFSDRERD
RERDRDREKEREKVDEEKDEEELLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSKLRNL
YERFEEELGGRQERAKEARPKWEPPKTKLDEDPDDSSSDSDCESDKEGSSCSSSSDSDIF
DVIAEIKRKKSHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEPVKQCR
PMNNNTGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLASIPLCRVIR
FNIDYTIHFIEEMTPENFCVRGLELLASYLFRDILELYDWNLIGPDNEDETSGCQGFHFM
PRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELEWQKYAEECKGMIV
TNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRH
LLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMM
LPVLTHHIRYHQCLMHLDDLIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGI
RQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSV
HLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMAN
CFEALIGAVYLEGGLDEARQLFGRLLFNTENLQEVWLNFPPHPLQVQEPQTDRQLIETSP
VLQKLTTFETSIGVFFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYL
FIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLE
SFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIP
LYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKR
FIERKYRQELKEMRRERERQEMETDEVDECRK
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcaggaccgtggtggacccggaggaggaggaggaatgcctccaggtcag
cacggatcccctcaaagctaccgaccccccaacctgagggcgccgccccctccgcagcct
cctttaccgccctaccactatgatccacaggctccacccagctctggctaccatggaaac
agcagctacatgcctccacgctctgacttcatgcagtatcctcctccggtgcaatcccag
gcacccagttctcttaaccagtgtccagtgcgtccaactttccccaaacctccggtccgg
caaggtttcttagatcctcctcccaactttccacctcctcctctgcccagctccacaggg
ggtcagccggggtcctctcagaacgcctaccacccctatatgatgccacctgtgccgcca
ccaccgttgccacacccccctgtacctcatccaatggcttctcagtccatgagctaccct
tcgccgtactccatgaactaccctcatcctccacaccctcccttccctcctcccaccttc
aatcctggctacactcagagcccgggctcgttcaagccggaccacagcttcagacacggc
cagttcaagtatgaaaaaacaatggacaacaggcggtcctcaccagagcgaggctatcgc
cacgatgaccaccggcagaagggctatggctacggcggcagtggcggccacggtgaccgg
cacaagatggagcttcccgcagacaggaaagaccacgggaggagtccagacagacgtgtc
aggccagagggaggacggtaccgacctgagtacgacagaggaaggacgccacctagacac
aggagcagggatcgcagcagagagcgacatcgtcacagagaaagtctgaagtcgcagtcg
cctgagaggcacagaaagaggcctcggagtcggtccacaagcagagaccggaaacgtggt
cgctgggaagaggagagggacaggaggtcagagagctcctcgggcctgagcagggagcgc
agctacgcgtcagtcaggagcagagactccgacgaggctttcagcgacagagagcgcgac
cgagagcgggacagggacagagagaaggagagagagaaggtcgacgaggagaaagatgag
gaagagctgctgaaacctgcctggatccgctgcacacacgcagaaaactactactccaat
gaccccatggaccaagtgggagactccacagttgtggggaccagtaaactgcggaacctg
tacgagcgcttcgaggaggaactgggagggagacaggaacgagccaaggaggcccgaccc
aagtgggagcctccgaagaccaaactggacgaggatccagacgacagcagcagcgactcg
gactgcgagtccgacaaagaaggaagctcctgctccagcagctcggactccgacatcttc
gacgtcatcgccgagatcaagaggaagaaatctcatcctgaccgtctgcacgaagagctg
tggtacaacgacccgggacagatgaatgatggccccttgtgtaagtgcagcgccaaggcc
agacgtacaggaatccgccacagcatctacccgggggaggagcctgtgaaacagtgtcgt
cccatgaacaacaacacggggaaactgttccactaccggatcaccgtgtctccaccaacc
aacttcctgacggacaggccgacggtgatcgagtacgatgaccacgagtacctgtttgaa
ggcttctctctcttctcgcacactcccctcgctagtattccattgtgccgtgtgatccgc
ttcaacatagattacaccattcacttcatagaggagatgacaccggagaacttttgcgtc
cgaggcctcgagctcctcgcctcctacttgttccgggacattctggagctttacgactgg
aacctcataggtcctgacaacgaagacgagacctctggatgccagggcttccatttcatg
ccacgctttgtccgattcttaccagatggcggtaaggaggtgctgtccatgcaccaggtg
ctgctgtacctgctgcgaagcagcaagccactggtgcccgaggaggagatcgccgacatg
ctgcagtgggaggagctggagtggcagaagtacgcggaggagtgcaagggcatgatcgtc
accaacccgggaatgaaacccagctctgtgcgaatcgaccagctggacagagagcagttc
aacccggacgtcatcaccttccccatcatcgttcactttggaatccgtccggctcaactc
agctacgcaggagaccctcagtaccagaagctgtggaagagctatgtgaaactacgccac
ctgctggccaacagccccaaggtcaaacagatcgacaagcagaagctgacacagagagag
gaagctcttcagaagatccggcagaagaacaccatgcgccgtgaggtgacagtggagctg
agcagccagggcttctggaagactggcatccgctccgacgtctgtcagcacgccatgatg
ctgccagtcctcacacatcacatccgctaccaccagtgtctcatgcacctggatgacctc
attggctacgtcttcaaggaacgctgcctccttcagctcgccatgactcatcccagtcac
cacctcaacttcggcatgaaccctgatcacgctcgcaactccctctccaactgcggcatc
cgccagcccaagtacggcgacaggaaggtccaccacatgtacatgaggaagaaaggaatc
aacacgttgattaacatcatgtcgcgtctgggtcaggatgacccctccccctccaggatc
aatcacaacgagagactggagttcctgggcgatgctgttgtcgagttcctcaccagtgtt
cacctctactaccttttccccagcttagaggagggcggcctggccacgtacagaacagcc
atcgtgcagaaccagcacctagccatgctcgctaagaaactagagttggaccgcttcatg
ctctacgctcacggaccggatctgtgccgggagtcagacctacgccacgccatggccaac
tgctttgaagctcttatcggtgccgtgtatttggagggaggtctggatgaggcgcggcaa
ctctttggtcgactacttttcaacactgagaacctacaggaggtctggctcaacttccca
ccgcaccccctgcaggtccaggagcctcagacggaccggcagctgatcgagacgtccccc
gtcctccagaaactgaccacctttgagacgtccatcggcgtcttcttcacacacgtgcgt
cttctcgccagagcgttcaccctgaggactgtgggctttaaccacctcaccctgggccac
aaccagaggatggagttcctgggcgactccataatgcagctggtggccacagagtatctc
ttcatccacttccctgaccaccatgaaggacatttaacgctgctgcgcagttcgctggtg
aacaaccgcacacaggccaaagtggcggaggagctcgggatgcaggagttcgccatcacc
aacgacaaaaccaaacgtccggtcgcactgcggaccaagacgctggctgacctgttggaa
tctttcatcgcagcgctctacatagacaaagacctggagtatgtgcacaccttcatgaat
gtgtgctttttccctcgactgaaggagttcattctgaaccaggactggaatgaccccaag
tctcagctgcagcagtgctgtttgaccctgagaacagagggcaaggagcctgatatcccg
ctgtacaagaccctgcagacggttggcccgtcgcacgcccgcacctacaccgtcgccgtc
tacttcaaaggagagcgaatcggctgcggcaaaggcccgagcatccagcaggcggaaatg
ggagccgcgatggatgcactcgaaaaatataacttcccacagatggctcatcagaagcgc
ttcatcgagcggaaatacaggcaggagctgaaggagatgagacgggagcgcgagcggcag
gagatggaaaccgacgaggtggacgagtgcaggaagtga
DBGET
integrated database retrieval system
