KEGG   Solea solea (common sole): 131472358
Entry
131472358         CDS       T10853                                 
Symbol
lig1
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe03030  DNA replication
ssoe03410  Base excision repair
ssoe03420  Nucleotide excision repair
ssoe03430  Mismatch repair
Brite
Enzymes [BR:ssoe01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     131472358 (lig1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     131472358 (lig1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     131472358 (lig1)
DNA replication proteins [BR:ssoe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    131472358 (lig1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     131472358 (lig1)
DNA repair and recombination proteins [BR:ssoe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     131472358 (lig1)
   NER (nucleotide excision repair)
    Other NER factors
     131472358 (lig1)
   MMR (mismatch excision repair)
    Other MMR factors
     131472358 (lig1)
SSDB
Other DBs
NCBI-GeneID: 131472358
NCBI-ProteinID: XP_058505434
LinkDB
Position
1:3446956..3501916
AA seq 1011 aa
MQRSIASFFQPKSKDKDNVVQKKSKDEPAKKPLKSPLKVQNGAQDADSPVKKVAKRSRQI
LDSDDDETPVVKEQVATKGQGDKEAPSKTEKKDDVFKAVPTPLSPPPAPATPVTPATPAT
PASSASPGTPSTPNSISPSGIVKRKTGQSLNHARKMFPKRKLDESGSESQREEADAKEEQ
GQQSKRPRVEPVADSPGNPGDPMEEGAKEEQVEKPVTKDNSPDEEENKEKEEREKAKEER
RVERKSSDEEEKKAEGAEKKNEAKEKMDDEKGPAVAKMEVDEKDTREVEKSPKSQAAKEQ
KDKEQAKKAPISSFFAPRKAAVKTEKQEKKDGEKRRSAERKSSAEESKETKSETTSGEKD
FNPSRPGYHPIDHACWKQGQKVPYLAVARTFEKIEEDSGRLRNIETLSNLLRSVLLLSPD
DLLCCVYLCLNQLGPAYLGMELGVGETVLMKAVAQATGRQLDKIKAEAQEKGDLGLVAES
SRSNQRIMFQPASLTAGGVFKKLKEIASMSGNSAMNKKIDIIKGLFVACRFSEARYIVRS
LAGKLRIGLAEQSVLSALNLAVCLTPPGQGFPPAVIDAGKGMSTESRRAWIEEKSLILKQ
TYCEMPNYDILIPVLLKEGIDQLPNHCKLTPGVPLRPMLAHPTKGVGEVLKRFDEAAFTC
EYKYDGERAQIHILESGEVRVFSRNQEDNTSKYPDIISRIPKMKKDSVVTCVLDTEAVAW
DREKKQIQPFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVRQPLCRRRALLKES
FSEVEGEFVFARSIDSDNTDAIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHNWLKL
KKDYLEGVGDTMDLCVIGAYMGKGKRTGTYGGFLLACYDEENEEFQSVCKIGTGFKDEDL
EQHYKFLKDHILPKPRAYYRVDQSAEPDVWLDAMQVWEVKCADLSLSPVYKAALGLVDPE
KGISLRFPRFLRIRDDKKPEDATTGAQIADFYQKQQQIQNQGEKADPEDYY
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgcagcgcagcatcgcatccttctttcagcccaagagcaaagacaaggacaacgtcgta
cagaagaaaagcaaagatgaaccagcgaaaaaacctttgaagagccccctcaaggtgcag
aacggcgcgcaggacgccgattcacccgtcaagaaggttgccaagcgcagccgtcaaatc
ctggacagtgacgatgacgagacgcccgttgttaaagaacaagtcgctaccaagggacaa
ggagacaaagaggccccgagtaagacggaaaagaaggatgatgtgtttaaggcagtccca
acacccttgtctccaccaccagctccagccacccctgtaacacctgccactccagccacc
ccggcctcttcagcttcaccaggaacgcccagcactcccaactccatctccccgtctggg
atcgttaagcgcaagactggtcagtctcttaatcacgcgaggaagatgttccccaaaagg
aagcttgacgagagcggcagcgagagtcagagagaggaggctgatgccaaggaggagcag
ggtcagcaaagtaaacgaccccgtgtggagcccgtcgctgacagcccagggaaccccggt
gaccccatggaggagggagcaaaggaagaacaagttgaaaagccagtgaccaaggataac
agccctgatgaagaggagaacaaggaaaaagaggagcgagagaaggccaaagaagagagg
cgggtggagagaaagagctctgatgaggaagaaaagaaagctgagggggcggaaaagaaa
aatgaagcaaaggagaagatggatgatgagaaagggccggccgttgccaagatggaggtg
gatgaaaaggacacgagagaggttgagaagagcccgaaaagtcaagcagcgaaagagcag
aaagataaggagcaggccaagaaagcccccatcagcagtttctttgctcccagaaaagcc
gcggtgaagacagagaagcaagagaagaaggacggagagaaaaggaggagcgcagaaagg
aagagttcagcggaggaaagtaaagagacaaaaagcgagacaacgtcaggagaaaaggat
ttcaatccatccaggccgggctatcaccccatagaccacgcctgttggaaacaaggccag
aaagtgccgtacttggcagtggctcgcacctttgagaagattgaagaggactctggcaga
ctgagaaatatcgagacactgtcgaacctgctccgctctgtgctgctgctctctccagat
gacctgctgtgctgtgtgtatctgtgtttgaaccagctgggtcctgcttacctgggaatg
gagcttggcgtcggagagacggtcctgatgaaagctgtcgcacaagcaacagggcgacaa
ttggacaaaatcaaagcagaggcccaggagaaaggagatttgggcctcgtggctgagagt
tcccgtagcaaccagcgcattatgtttcaaccggccagtctgacggcagggggcgtgttc
aagaaattgaaggaaattgccagcatgagtgggaactcggccatgaataagaaaatcgac
atcatcaaaggcctctttgtggcatgccgtttttctgaggcccgctacatcgtcaggtcc
cttgctgggaagctgaggattggcctggctgagcagagcgtcctctctgcactcaacctg
gctgtgtgcttgaccccacctggacaaggtttccctcctgctgtgatcgatgcagggaag
gggatgagcaccgagagcaggcgggcctggatcgaagagaagagtctgattctcaaacag
acttattgtgagatgcccaattacgacatcctcatccctgttctgctcaaagaaggcata
gaccagctacccaaccactgcaagctcactccaggagtacctctgagacccatgttggct
caccccacaaagggtgtcggcgaggtgctaaagaggtttgacgaggctgcgttcacctgc
gagtacaagtacgacggcgagcgtgcacagattcacattctggagagtggagaagtgcga
gttttcagtcgcaaccaggaagacaacaccagcaaataccctgatatcatctctcgcatt
cccaagatgaagaaggactcggtggtaacctgtgtcctggacacggaggctgtagcctgg
gatcgtgagaagaaacagatccagccattccaggtcctcaccacccgaaagagaaaggac
gtggatgcctcggagatcaaagtacaagtgtgcgtgtacgcctttgacctcctctatctg
aacggcgagtccctggtgcgacagccgttgtgtcggcgtcgggctctgctgaaagaaagc
ttctcagaggtggagggagagtttgtgttcgctcgatccatcgactctgacaacaccgac
gccattgccgagttcctggagcagtctgttcgagattcctgtgagggcctgatggtgaaa
acactggagaaggatgccacctatgaaattgccaagcgctctcataactggctgaagctg
aagaaagactacctggagggtgtgggcgacacaatggacctgtgtgtgatcggtgcttac
atggggaaaggcaagaggacgggcacctacgggggctttctgctggcctgctatgacgaa
gagaacgaggagttccagtccgtctgcaagatcggcacaggtttcaaggatgaagatctg
gagcagcattataagttcttaaaggatcacattctgcccaagcctcgagcctactaccgc
gtcgaccaatcagcagagcccgacgtgtggctcgatgccatgcaggtgtgggaagtgaag
tgcgctgacctgtcgctgtcgcccgtctacaaggctgccctgggattggtggatccggag
aagggcatttctctgcgcttcccccgctttcttcgaatcagagatgacaaaaaaccagaa
gacgccacgaccggagctcagattgcagatttttaccagaagcagcagcagatccagaac
cagggggagaaagctgacccggaggactactactga

DBGET integrated database retrieval system