Solea solea (common sole): 131472361
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Entry
131472361 CDS
T10853
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04010
MAPK signaling pathway
ssoe04210
Apoptosis
ssoe04218
Cellular senescence
ssoe04519
Cadherin signaling
ssoe04620
Toll-like receptor signaling pathway
ssoe04621
NOD-like receptor signaling pathway
ssoe04622
RIG-I-like receptor signaling pathway
ssoe04623
Cytosolic DNA-sensing pathway
ssoe04625
C-type lectin receptor signaling pathway
ssoe04920
Adipocytokine signaling pathway
ssoe05132
Salmonella infection
ssoe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131472361 (nfkb1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
131472361 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
131472361 (nfkb1)
04218 Cellular senescence
131472361 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
131472361 (nfkb1)
04621 NOD-like receptor signaling pathway
131472361 (nfkb1)
04622 RIG-I-like receptor signaling pathway
131472361 (nfkb1)
04623 Cytosolic DNA-sensing pathway
131472361 (nfkb1)
04625 C-type lectin receptor signaling pathway
131472361 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
131472361 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
131472361 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
131472361 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131472361 (nfkb1)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
131472361 (nfkb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_5
Ank_4
Ank_3
Death
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
131472361
NCBI-ProteinID:
XP_058505437
LinkDB
All DBs
Position
14:complement(487522..502078)
Genome browser
AA seq
945 aa
AA seq
DB search
MAADDHYLHTNNQMFDNIMMDPSWDFPHFPAMSQTSSLRTADGPFLQILEQPKQRGFRFR
YGCEGPSHGGLPGASSEKNRKTYPTVKICNYQGPARVVVQLVTALTNLPQLHAHSLVGKQ
CDKGICVADLQPKDSTISFPNLGILHVTKKNVSKTLEDRMVEAFRMGHNYGVSIHPEIDA
QQGEVRVPRDLHEEQHSVISSAACVQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSE
PIYDSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDIQVRFFEEDDSGLIWEAL
GDFSPTDVHRQFAIVFKTPKYRDQNLQRPTSVFVQLKRKSDNETSEPKPFTYHPQNIDKE
EVQRKRQKTLPNFHDFSGHGAGAGGGGGGGLYRGGGGGGGGGPAAGGGPGSAGGGGGGGY
YQGFTTYNYGGGGGAGGGGGAGGFSTGYSAGLGGGGGGGGGIKHASQGDDSDDGGPGDDS
GAGTVRRGPGQAAEGGVRVEPEADRGEQWGHVTSRQLDALFQYSVTGDSAYLLAAQRPLM
TAQDEDGDTGLHLAVLHSQQEALKSLTQVVSALPGEEVLNMRNHLYQTPLHLAVITQQKE
AAEALLMAGADPTLTDRHGNTLLHLASQQQGGAGGGGGGAGMIEFLLTHGDIRGLLDHNN
TAGMCAIHLAVLANQLSCIRELLEGGANVEAQERSCGRTALHLATETDNVSLAGCLLLEG
NANVDCCTFNGSTPLHVAAGRGSAKLTALLMAAGADAHKENCEPLFFREEEAELCDEDDE
DEGYISGMTPINMAANAQVLELLNGKEYEPQTRRSVISPPQGDLASLDTAVKQEVCRSLE
SEGCWETLAHSLGLGILKTAFRLSPSPAKTLLDSYEVSGGTVSELLSALRTVGECRSLLV
LEEALCRSDTEGVTGGRGLALLQDLKAESRVDSGVCDSGVELSTA
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacgatcactaccttcacaccaacaaccagatgtttgacaacatcatgatg
gatccatcgtgggacttcccacattttcccgccatgtctcagacgtcgtctctgaggaca
gcagatggacccttccttcagatcctggagcagcccaagcagcgtggtttcaggttcaga
tatggttgtgaaggtccgtctcatggtggactgcccggagcatccagtgagaagaacagg
aagacgtaccccaccgtcaagatctgtaactaccagggtccggcccgggtcgtggtccag
ctcgtgacggcgctgacaaacctccctcagctccacgctcacagtctggtgggaaaacag
tgtgataaaggaatctgtgtcgctgacctgcagcccaaagactctactatcagttttcca
aacctgggaattctccatgtgacaaagaagaacgtgtcaaagactctggaggacaggatg
gtggaggcgttcaggatgggacacaactatggggtctctattcatccagagatcgacgcc
cagcagggggaggtcagggtcccccgagacctgcacgaggagcagcacagtgtgatcagc
agtgcggcgtgtgtccaatctaaggagatggacctgagcgtggtgcgtctcatgttcaca
gcgttcctccctgacagtgacggtggtttctccagacgtttggaacctgtggtgtcagag
cccatctatgacagcaaggctccaaacgcctcgaacctgaagatcgtgaggatggacaga
acggccggctgtgtgagcggaggagaggaggtgtacctgctgtgtgacaaggtccagaaa
gacgatatccaggtgcgtttctttgaagaagacgactcggggctgatctgggaagctctg
ggtgatttctcccccacagacgtccacagacagttcgccatcgtcttcaagactcccaag
tatcgggaccagaacctgcagaggccgacctccgtgttcgtgcagctgaagaggaagtcg
gacaacgagaccagcgaacccaagcccttcacctatcaccctcagaacatagacaaagag
gaggtgcagaggaagagacagaagacgctgcctaacttccatgacttcagtggtcatgga
gcaggagcaggggggggaggaggaggaggtctgtaccgaggaggaggaggaggaggagga
ggaggaccagcagcagggggaggtcctggttctgcaggaggaggaggaggaggaggttac
taccagggttttactacctataactatggaggaggaggtggtgcaggaggaggaggcgga
gcaggcggcttctccacaggatactcagctggtctggggggaggaggaggaggaggagga
ggcatcaaacatgcttctcagggcgacgactcggacgatggaggtccaggcgacgactcg
ggggcggggactgtgcggcgaggtccgggtcaggcggcggagggcggagtcagggtggag
cctgaagcagacagaggtgagcagtggggtcatgtgaccagcagacagctggacgctctc
ttccagtactctgtaacaggtgactcagcgtatctgctggctgcacagcgccccctaatg
acggcacaggacgaggacggagacactgggctgcacctcgccgtcctccacagccagcag
gaggcgctgaagagtctgactcaggtggtctctgctctgcctggagaggaggttctcaac
atgaggaaccacctgtaccagactcccttgcacctggcggtgatcacgcagcagaaggag
gcggcggaggcgctgctgatggccggggccgaccccacgctgactgatcgccatggcaac
accctgctgcacctggcatcacagcagcagggaggagctggaggaggaggaggcggggct
gggatgatcgagtttttactgacacacggagacatcagaggactgttggaccacaacaac
actgcaggtatgtgtgcgatccacctggcagtcctggccaatcagctgtcctgtataaga
gagctgctggagggcggagctaacgtggaggctcaggagcgcagctgtggaaggaccgcc
ctccacctggccacagagacagacaacgtgtcattggccggctgcctgctgctcgaggga
aacgccaacgtggactgctgcacctttaacggctccaccccccttcacgtcgctgcgggg
cggggctccgccaaactcaccgctctgctgatggcggcaggagccgacgcccacaaagag
aactgtgagccgctgttcttcagagaggaggaggcggagctatgtgacgaagacgacgaa
gatgaaggttacatatctggaatgaccccaatcaacatggccgccaacgcacaggttctg
gagcttctgaacggaaaagagtacgaaccgcaaacacgacgcagtgtcatcagtccacca
caaggtgacctggccagtctggacaccgcagtgaaacaggaagtgtgtcgctctctggag
agtgaaggatgctgggaaacactggctcacagtctgggtctcgggatcctgaagacggcc
tttagattaagcccctcccctgccaagactctgctggacagctatgaggtgtccggtggg
acagtcagtgagctgttgtccgctctgaggacggtgggtgagtgcaggtccctgctggtc
ctggaggaggcgctgtgtcgctctgacactgagggagtgactggtgggcgtggcctcgct
ctgctgcaggacttgaaggcggagtctcgcgtcgacagcggcgtctgtgacagtggggtg
gagctttccacggcgtga
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