Solea solea (common sole): 131472570
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Entry
131472570 CDS
T10853
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131472570 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131472570 (rbm22)
Spliceosome [BR:
ssoe03041
]
Complex B
Other components
Prp19-related factors
131472570 (rbm22)
Complex C
131472570 (rbm22)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
131472570
NCBI-ProteinID:
XP_058505876
LinkDB
All DBs
Position
14:complement(15419635..15424347)
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AA seq
427 aa
AA seq
DB search
MATSLGNNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKEDIPRSDVNKEYYTQN
AEREIANTDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSITTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPAMDEEAPANYFNLDPGTSTAV
MNIALPPPPGINPPPPGFGPPMFHPMGHMAPPMPPPMNMRPPGQIHYPSQDPQRMGAHAA
HGARHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctaggaaataacacctacaacagacagaattgggaagacgcggatttt
ccaattttgtgtcagacatgtttaggagaaaacccttacatccgaatgaccaaggagaag
tatgggaaagaatgcaaaatctgtgctcgtccctttactgtgttccgatggtgtccaggg
acacggatgcgtttcaagaagacggaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcagacatgtttgcttgacttggagtatggtttgcctatccaggtccgtgacactgga
ctttctgttaaggaagacattcctaggtcagatgtgaacaaagagtactacactcagaat
gcggagagagagatagccaatactgacggcacacggccagtgggccagttgggtaaggct
cccagctccagtgacatgttgctgaaactggcacgtacaacaccatattacaagagaaac
cggccccacatctgctctttctgggtgaagggagagtgtaaaagaggagaggagtgtcct
tacaggcatgaaaagcccacggatcccgatgaccctctagctgaccaaaacatcaaagac
cgttactacggtatcaatgacccagtagcagacaagctgctgaaaagagcttcaactatg
ccccgacttgacccaccagatgacaagtctatcaccaccctgtacatcgggggtttggga
gatactgtcacagatggagacctcaagagtcacttttaccagtttggtgagattcgcact
attaccatagtccagaggcagcagtgtgccttcatccagtttgccacaagacagtcagcc
gagatggctgctgagaagtccttcaacaaactgatcattaacggacggaggctcactgtc
aagtggggaaggtctcaggcagcaagaggaaaggagggcatcaaagatggtgttagtgag
atgggcactaggcttgatcctgtccctggtctgcctggagctcttcctccacctccagcc
atggatgaagaggctcctgcgaattacttcaacctggaccctggcacttctactgctgtc
atgaacattgctctacccccacctcctgggatcaatccacctcctccagggtttggacct
ccaatgtttcaccccatgggtcacatggctccacctatgcctcctccaatgaacatgaga
ccccctggtcaaatccactatccctcccaggatcctcaacgcatgggcgcccatgctgca
catggtgctcgccatggcgattag
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