| Entry |
|
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| Symbol |
upf3b
|
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| Name |
(RefSeq) regulator of nonsense transcripts 3B
|
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| KO |
| K14328 | regulator of nonsense transcripts 3 |
|
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| Organism |
ssoe Solea solea (common sole)
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| Pathway |
|
|---|
| Brite |
Messenger RNA biogenesis [BR:ssoe03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
131472680 (upf3b)
mRNA cycle factors
P-body specific factors
131472680 (upf3b)
|
|---|
| SSDB |
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| Other DBs |
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| LinkDB |
|
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| Position |
14:20680516..20684554
|
|---|
| AA seq |
460 aa
MKEDKENTRPKDKRMDLRSEDGEKMERSKEKKEAMTKIVIRRLPPSLTKDELEEQLQPLP
ELDYMEFFSNDTSLYPHLFARAYINFKNQDDIVLFRDRFDGYVFIDGKGQEYPAVVEFAP
FQKTAKKRSKKKDAKCGTISDDPDYKKFLEYYNGDEEKLTSTPETLLEEIEAKSKELVAK
KTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREDERRKRKEADKMKRLEK
PLEKDKDQVKEEPKIKLLKKPDRGDDADSEKPKEKKKTEKHSKDDRPLGSTDHKRRQHID
NKEDRGRKVDGDGRKEFRERDADRDREREREREKERRQKEKERIRRQDEDRRRRRERHDG
ENSNRKREDEVKREKEHEKKKVENSGESGHLERPEKFAKDNKKDESSKRERLRNKDRPAI
QLYQPGTRSRRTTGGGGAESNSADRKPDPETKKADDKGDD |
|---|
| NT seq |
1383 nt +upstreamnt +downstreamnt
atgaaggaagacaaggaaaacacccgacccaaggataaaagaatggacttaaggagcgaa
gatggagaaaagatggagagatccaaagaaaagaaagaggccatgacaaagattgtgatc
aggcgtttaccaccaagtttgacgaaggacgagctggaggagcagctacagccgctccca
gagctggactacatggagttcttctctaacgataccagcctttatcctcatctcttcgca
agggcttacatcaatttcaaaaatcaagatgatattgtcctcttcagagatcgatttgat
ggatatgtattcattgacggcaaaggtcaggagtatcctgccgttgtcgagtttgcaccc
tttcaaaagactgccaagaagagaagtaagaagaaggatgcaaagtgtggaacgataagt
gacgatcctgattacaagaagttccttgaatattacaatggagatgaagaaaagttgaca
tcaacacctgagaccttgttggaagagattgaggcaaaatcaaaggaactagtagctaag
aaaacaactcctctgctggacttcctgaaaaataaacagagaatcagggaggaaaagaaa
gaagagaggaggaggcgagagctggagcgcaagcgtctgcgggatgaggagcgacgcaag
tggagggaggatgagagaaggaagcgtaaggaggcagacaagatgaagagactcgagaag
ccactggagaaagataaggaccaagtcaaagaagaaccaaaaattaagcttttgaagaag
ccagacagaggtgatgatgctgattcagagaagccaaaggaaaagaagaaaacagagaag
cacagtaaagatgacagacccttgggaagtactgatcacaagaggcgtcagcacatcgac
aataaggaggatcgaggaaggaaagtggacggcgacgggcggaaggagttcagagagcgc
gacgcagaccgagacagggagcgtgaacgagaacgggagaaggagcgcaggcagaaagag
aaggagcgcatcaggcgacaggacgaagaccggcggagaaggagagagcggcacgatgga
gagaactcaaacaggaagcgggaagacgaagtgaaaagagaaaaggaacatgagaagaaa
aaagttgaaaatagtggggagtctggtcacttggagaggccggaaaagtttgccaaagac
aacaagaaggatgaaagtagcaaaagagagcgactacgaaataaggaccgtcctgctatt
cagctctatcaacccggtaccagaagccgcaggactacaggaggtggaggagccgaatcc
aactctgcagacaggaaaccagatcctgagaccaagaaagcggatgacaaaggagacgac
tga |
|---|
