Entry |
|
Symbol |
fat4
|
Name |
(RefSeq) protocadherin Fat 4
|
KO |
|
Organism |
ssoe Solea solea (common sole)
|
Brite |
KEGG Orthology (KO) [BR:ssoe00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:ssoe04515]
131473014 (fat4)
Cell adhesion molecules [BR:ssoe04515]
Cadherins
Cadherin related
131473014 (fat4)
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
14:complement(3327716..3376954)
|
AA seq |
3303 aa
MLKEGINSCSRAQFGGALTETVVFTLPPPPLQVEITLQDVNDNPPIFPNDILDVTIEENV
GDGFKIMQLTATDADEGPNALVTYTIISGADDSFRIDPESGDLIATKKLDRERRSKYSLL
VRADDGKQSSDMRLNITVKDINDHTPKFSRPTYSFDIPEDMASGSIVAAILASDSDSGVN
GEVTYSLEEDDEDETFLLNPVTGVFNVTRPLDYETQQYYILTARAQDGGGQTSTVRVYFN
VLDVNDNVPVFNTSVYSTSVSESLPPGSSILTVGASDADDGPNAQLLYKIASGDSQSHFV
ITKEGVLQTKKALDRETQSFYNLVITVNDLAPPPMTRFTSTAQVSVILLDVNDCPPTFTS
QRMTYIQENTPVDTVVFTAQAVDADSGPNSYVEYSLRGPYGNKFSIGTVDGDVRLVGELD
REEFSNYTLTVVATDKGEPPLSSTMEVTMMVLDVNDNTPSFSQNIYDIEIEENTLTGTDV
IQVFATDADEGTNGQIRFSISGGNGNSDFRIDSVTGVISVAKQLDREARSSYSLVVQAAD
RGSSPRVDRATVNIVLLDVNDCSPVFELSPYTVNMQENLESLPKNILQVVARDDDQGANS
QLSYMLSVGNDEGAFSLSSSGQLSLTQTLDREVQGKYVLLITATDSGSPPLSGTGTVTVL
VDDVNDNVPVFTSSSFHTTITEDAPTGSDVLLVNSSDADVGVNGVISYSLTGGHGQFSIN
PATGQIITSSLLDREDRANYQLLVVATDGGQPEGLSSSATVSVTVADINDNPPRFHHHPY
VTHIPASTTAGSLVFAVTVTDEDAGSNAQLHYSLMGRNSEKFKIDPVRGAITANEKLTGT
SEVTLTVRVKDGGANPKTDMTTVTVRFVTGGNFPVIKVRERAFTFPESQPANHVVTTVTG
SSMRGGLLSYYIASGNLDNAFHIDQLSGELSIRHSLDYEHIQKYVLWVEARDQGFPPYSS
YEKMEINVLDVNDNHPVFDKDPFHAEILENLSPQRVLMVSAVDLDSGPNGQLEYAIMDGN
KENSFSINRATGEIRTTRPLDREKVAQYSLKVKATDRGLPPKNTAVKVLISVLDVNDNAP
RFSKIFSASVAENAPVGYTVTRVTTTDEDAGSNAVSRYSITDTSLPFNINPSTGDITISR
PLNREDTNHYIVKVSAHDSGWTVSTDVTIFITDINDNAPRFSRPSYYLDYPELTEVGSLV
TRVSATDPDEGFNGKIFYFIRSQSEFFRINASTGEIFVKQQLKYQNSSAASSMNINRHSF
IVTASDRAMKPLMSETTVIVNVVDSNDNPPEFDSSSYFTPVTKSVKVGTRLIRVAAQDRK
DFGLNSEVEYVITGGNSSSKFKLDKTSGWITVASSLTSDMKKIFLMDITATDRGNPPLSS
RTSVRIVVTEENHHTPEFSQSHISATVPESLAVGTAIRTVSARDKDKEMNGLITYNITSG
NEKGRFALNSKTGVLSLAKPLDFEEKQQHELRVTATDGGWIVKTSYVSVTVHVTDVNDNP
PVFDPEEYFPTVQENVPSGTTVVKMNAADRDSGANAVMAYVIQSSDSDLFVIDPNSGTIT
TQGFLDYESKQVYHLTVKAFNVPDEERCNFANVNIQLKGANEYVPRFVSKQYYFEISEAA
PRGTVVGEVFASDRDQGDDGVVYYLIFGKSRKKGFSINRKTGQIYVTGTLDREREEKISL
KVLAKNAGSIRGADIDEVFVNITILDANDPPVFTQELYDVQVSEGLSPGGLVTFVSAEDS
DSVPSWSRFTYSISPEFDKNVFTINPKTGQVSVAAELDRETTPVYNLSILAVDTGTPPAT
GSTTVIVNLEDINDNGPTLTTAYAEVMENQRAGTGVKTLTASDPDLPPNQGPFLFSLLSS
GSANSYFSLSPAGVLTTSREIDREQISDFYLSVMIKDSGVPQMSSTGTVHVKINDQNDNP
SEPRSMEILVHYFGNMFPGGSLGDVKPQDPDIQDRFHCSLIPPSSSLFNIPTGSCNLNSK
SRSTDGTFELTVRSSDGVHGSVSNTARVVFMGFTNATVDNSILIRLNSQGIKNFLTDHYL
SFLRIANSQLAGLGTGVLLYGAFELNNQTFLMAAVKRGHGQYVNPSGVATFFQSIKDILY
RQSGVQIDAVDHDPCTHNPCQNGGSCKRRLSVGPDMKTEESVPVILVSNHPLQPYACSCR
PGYTGALCETDVDECQPSPCHNGGTCHNLVGGFSCTCPEGFTGMACERDVNECLSNPCKN
GALCQNFPGGFNCLCKSGFAGKTCDSIINHCECNPCFNGGSCQNRVDGYYCHCPFGVFGK
HCELNSYGFEELSYMEFPSLDPNNNYIYIKFATLQSNALLMYNHDNQTGDKAEFLALEIF
EGRMRFSFNLGSGTYKLMTMIKVADGQFHTVIARRAGMAASLTVDLCGDDHEPGYCAVSN
VAVHTDWILDVQPNRLSVGGVRSIEPVLHRRGQIATHDFVGCIMEFAVNGRPLEPSQALA
SRGILDRCPRLEGACTTSPCRHGGTCLDRWSWQQCQCVDGFTGKFCEKYMTADTALSLDG
TGRLDYSLKPGPKRDVLLRQSLQGRSSDRVGPSSLEVKFRTRSKTGTLLHVQESSNYTTV
KLRNGNIHYISDAGVGGKVERTVGDAVLSDGQWHTLQLVKNGSATVLQVDSGHPRVIQHV
TQDFGGLGVLTFSLGGIPPGPAQQKTAAGFDGCLAFVKYNRESLPFTGEHSLVTLTKTSS
SVKIGCRGPNLCESSPCWDGLMCVNQWYTYQCVPPGDCSSNPCQNHGSCVPDARSGFTCV
CSEFYTGKTCETLVACLGVQCPQGTVCKTANNGGFVCSPSPTAETMVLPIWAVPAIVGSC
ATVLALVVLSLILCNHCKDRNKTKVPKEPKEKKPKEKKKKKKKGSENVAFDDPDNIPPYG
DDMTVRKQPEGNPKPDIIERENPYLIYDETDIPHNNETVPSAPCAPCNVPEADIEHYDID
NASSIAPSDADIIQHYKQFRSHTPKFSIQRHSPLGFARQSPLPLGATSYTYQPQYTQALR
STPLSHSHSACPTPNPLSRHSPAPFTKPSSFYRNTPTRELNLARREGSPLDLHNDMCQPP
PMFNYATRLGRRSKSPQTMASHGHTSRPGSRLKQPIEQIPLETGPPVGLSIEEVERLNTP
RPRNPSICSADHGRSSSEEDCRRPLSRVRNPADGIPAPESSSESDSHDSFTCSEMEYDRD
KPVSYTSRVPKLSQVNESDADDEDYSGRLKQRRYSSRRAEGGPGVSQMPPSEQHYTLPHK
LGQQAGGFNWDNLLNWGPGFGHYVDVFKDLALLPENAAAKDIEMNSGDGSVTILNEGEAE
QYV |
NT seq |
9912 nt +upstreamnt +downstreamnt
atgttaaaagagggtatcaacagctgtagcagggcccagtttggcggcgctctaacggaa
actgtggtgtttactcttcctcctcctcctctgcaggtggaaatcacgctgcaggacgtc
aacgacaacccgcccatcttccccaacgacattctcgacgtgaccatcgaggagaacgtc
ggcgacggcttcaagataatgcagctaacagccacggatgcagatgagggtcccaacgct
cttgtgacgtacaccatcatcagcggggcggacgacagcttccgcatcgacccggagtcc
ggcgatctcatcgccaccaagaagctggatcgggagcggcgctcgaaatactccctcctg
gtgcgcgccgacgacgggaagcagtcgtccgacatgaggctgaacatcaccgtgaaggac
atcaacgaccacacgcccaagttctcccgccctacgtactcatttgatattcccgaagac
atggcatcaggctccatcgtggcggcgatcctggccagtgactctgactcaggggtaaac
ggtgaggtcacgtactcgctggaggaggacgacgaggacgagacgttcctcttgaacccg
gtgacgggcgtcttcaacgtgacgcgcccgctggactacgagacgcagcagtactacatt
ctcacagcgagggctcaggacggcggagggcagaccagcacggtcagggtgtacttcaac
gtgctggacgtcaacgacaacgtgcccgtcttcaacaccagcgtgtacagcacgtccgtc
tctgagagtctgccgcccgggtccagtatcctcactgtcggggccagtgacgccgatgat
ggccctaatgcccagctcctctacaaaattgcctcgggtgattcccagagtcactttgtc
atcaccaaagagggagtcctccaaaccaagaaggccttggacagagaaacacaatccttc
tacaacctggtgatcacagtcaacgacctggccccgcctcccatgacccgcttcaccagc
accgcccaggtgtcggtcattctcctggacgtcaacgactgcccgccgaccttcacctcg
cagaggatgacctacatccaggagaacacgcctgtggacacggtggtgttcaccgcccag
gcggtggacgccgacagtggacccaacagttacgtcgagtattcgctgcgaggaccctat
ggtaacaagttcagcattggcacagttgatggagacgtccggttggttggggagctggac
cgggaggagttttccaactacaccctcacggttgtggccacagataaaggagaaccccct
ctgtcttcaaccatggaagtgaccatgatggttctggacgtcaatgacaacacgccgagc
ttctcgcaaaacatctacgacattgagattgaggagaacaccttgacgggcacagatgtc
atccaggtgttcgctacagatgcggacgagggcaccaacggccagatccggttttcaatc
tcgggaggcaacggcaactctgatttcagaattgattcggtcacaggtgtgatttctgtg
gccaagcagctggaccgcgaggcgcggtcatcctattccctcgtggtccaagcggccgat
cgcggcagcagccccagggtggaccgtgctaccgtcaacatagttctgctagacgtcaac
gactgttcgcctgtgtttgagctctctccttacaccgtcaacatgcaggagaacctggag
agcctgccaaaaaatatcctgcaggtcgttgccagagacgatgaccaaggtgccaacagc
cagctgagctacatgctgagcgttgggaatgacgagggcgcgttcagcctgtcgtccagc
ggtcagctgagcctgacccagacgctggaccgtgaagttcaggggaaatacgtgctgctg
atcacagccaccgactcaggttctccgcctctgagcggcacggggaccgtgacggttctg
gtggacgacgtcaacgacaacgtgcccgtcttcacctcctcgtccttccacaccaccatc
acggaggacgcccccacgggctcggacgtgctgctggtcaacagctcggacgcggacgtc
ggcgtcaacggtgtcataagctacagtctgaccggaggacacggccagttctccatcaac
cccgccacaggacagatcatcaccagctccctgctggaccgggaagaccgcgctaattac
cagctgctggtcgtggccaccgacggcgggcagcccgagggcttatccagctccgccacg
gtgtccgtgactgtggcggacatcaacgacaacccaccgcgcttccaccaccacccttat
gtcactcacatccctgcctctaccacagcagggtcgttggtcttcgccgtcaccgtcacc
gatgaggacgcggggtccaacgctcagctccactactccctcatgggacgcaactctgag
aagtttaagattgacccggtcagaggagccatcacggccaacgagaagctgacgggaacc
tcagaggttacactcacggtccgagtgaaagacggcggagccaatcccaaaacggatatg
accactgtcacagttcgcttcgttactggaggaaacttccccgtcatcaaagtgagggag
cgcgcgttcacgttccccgagagccagccggcaaaccacgtcgtgacaacagtgactgga
tcctcaatgaggggcgggctgctgtcgtactacatcgccagtggcaacctggataacgct
tttcacattgaccagctctcgggcgaactgtcaatcagacactcactggattatgagcac
attcagaagtatgttctctgggtggaggccagagatcagggctttccaccatattcctct
tatgagaagatggaaataaatgtgctggacgtgaatgacaatcacccggtgtttgataag
gatcctttccacgcggaaatactggagaacctgtcacctcagcgggtgctgatggtctct
gccgtagatctggacagcgggccgaacggacagctggaatatgccatcatggacggcaac
aaggagaacagcttcagcattaatcgggcgactggcgaaatacgtaccaccaggcctctg
gaccgggagaaggtggctcagtactctttgaaggttaaagccacagacagagggctgccg
cccaaaaacacagcagtcaaagtgttaatcagcgtgctggacgtgaacgacaacgccccc
aggttttccaaaatcttcagcgcgtcggtggcggaaaacgccccggtgggttacaccgtc
accagggtcaccaccacagacgaggacgcggggtcaaacgccgtcagccgatattcaatc
acagacacgagccttccgttcaacatcaatccaagcacgggagacataacaatcagcagg
ccgctcaacagagaagacactaaccattacatcgtcaaagtgtctgcccatgactctggc
tggacagtgagcacagacgtcaccatattcataacggacattaacgataacgcacccaga
tttagtcgtccctcttactacctggactatcccgagctcactgaagtgggttccctggtc
acgagggtttctgccacggatcccgatgagggtttcaacggcaaaatcttttatttcatc
cgctcccagtctgagtttttcagaatcaacgccagcactggagagatatttgtgaagcag
cagttgaagtatcagaactcgagtgctgccagcagcatgaatataaatcgccacagcttc
atcgtgacggcctcggaccgggcgatgaagccgctgatgagtgagacgacagtcattgta
aatgttgtggacagcaacgataatcctcccgagtttgactcctcgagctacttcactccc
gtcaccaagagcgtcaaagtcggcaccagactgattcgagtcgcagctcaggacagaaaa
gactttggcctgaattccgaggtggagtacgtaattaccggcggaaacagctcgagtaaa
ttcaaactggacaaaaccagtggatggattactgtcgcttcctctcttacgtccgatatg
aagaagattttcctcatggacatcacagcgaccgaccgagggaacccccctctgtcgtcg
cggacgtcggtgcgaatagtcgtcacggaggagaaccaccacacgcccgagttctcgcaa
agccacatctcagccactgtgcctgaaagcctcgctgtgggaacagctattaggactgtg
tctgccagagacaaagacaaagaaatgaacggcctcatcacgtacaatattacttcaggc
aatgaaaagggccggtttgcccttaatagtaaaaccggagtgttgtccctggccaaacct
ctggactttgaagagaagcagcaacatgaacttagagttacagccacggatggaggctgg
atcgtcaaaacgagctacgtctcggtcacagtacacgtgaccgacgtgaacgacaaccct
cccgtgtttgatcctgaagagtacttccccactgtgcaggagaacgttcccagtggcacg
accgtggtcaaaatgaacgccgctgaccgcgactcgggagcgaacgcggtcatggcttat
gtgatccagtcctcggacagtgacctctttgttatcgacccaaactctggcaccatcacc
acgcaaggctttttggattacgagtctaagcaggtctaccatttaacagtaaaggccttt
aatgtcccagacgaggagcgctgcaacttcgccaatgtcaatattcaactgaagggagcc
aacgaatacgtaccccgctttgtctccaaacagtactactttgaaatatctgaagctgct
ccaagaggcacagtggtcggggaagtgttcgccagtgaccgggaccagggagatgatgga
gtggtttactacctcatttttgggaagagcagaaagaaaggctttagcatcaataggaaa
acaggtcagatttatgtcacaggtactctagaccgtgagagagaagaaaagatttcactc
aaagttctcgccaagaacgcggggagcatccgcggtgcagatattgatgaggtgtttgtg
aatatcacgattctcgacgctaatgaccctcccgtttttacccaagaactgtacgatgtg
caggttagtgagggtctctcacccggtggtctggtaacctttgtgagtgctgaggactca
gactctgttccaagctggagccgatttacttactccatttctccagagtttgataaaaat
gtttttactatcaacccgaaaacaggccaagtctctgtagccgcagagctggacagagaa
acaactcctgtttataatctatccattctagctgtggatactggcacacctcctgcaaca
ggaagcaccaccgttattgtgaatctggaagacatcaatgataatggtccaactttgaca
accgcttatgctgaagtaatggagaaccagagagctggcactggagttaaaacactgaca
gcctctgacccagatctacccccgaaccaaggccctttcttattcagcctcctcagttct
ggctccgctaacagctacttcagccttagtccagctggagtgttaacaaccagccgagag
atagacagagaacagataagcgacttctacctctctgttatgatcaaggattctggcgtt
cctcagatgtcctccacaggaacagtccacgtcaaaataaatgaccagaatgacaaccct
tcagagccgaggtccatggaaatccttgtccactactttgggaacatgtttcccggaggt
tcattgggtgatgtcaaaccccaggacccagacattcaggacaggttccactgctccctt
attcccccatcgtccagcctctttaatatcccaactggatcctgcaacctcaactctaaa
tctcgttcaaccgatggcacctttgagctaaccgtccgtagtagcgacggcgtccacggt
tccgtcagcaatacggctcgagtcgtcttcatgggcttcaccaacgccacagtagacaac
agcattctcatccgtctcaactcacaaggaatcaaaaacttcctcacggaccactacctc
agtttcttacgcattgccaactcgcagctagcaggactgggcacaggagtgctcctctat
ggagcgtttgagctcaacaatcagactttcctgatggcagctgttaaacggggccacgga
caatatgtcaaccccagcggcgtggccacattcttccagagtatcaaagacattttatat
agacagagcggggtgcaaatagatgcggtggaccatgatccgtgcacacataacccgtgc
cagaacggaggcagctgcaagcggcgtctcagtgtcgggcctgatatgaagacagaagaa
agtgtcccagtgatccttgtttccaaccaccccctgcagccgtacgcctgcagctgcagg
ccaggatacacaggagccctgtgtgagacggacgtcgatgagtgccagccgtcgccctgc
cacaatggcggcacctgccataatttggtgggcggcttctcctgcacctgtcctgaaggt
ttcaccggcatggcctgcgagagggacgtcaacgaatgcctctccaatccctgcaagaac
ggggcgctgtgccagaacttccccggcggcttcaactgcctctgcaaatctggctttgca
ggcaaaacgtgcgattccatcatcaatcactgtgagtgtaacccatgttttaatggtggc
tcctgtcagaatcgggtggatggatattactgtcattgtccgttcggggttttcggcaaa
cactgtgaactcaacagctatggctttgaggagctctcttacatggagtttccgtcgctg
gatcccaacaataactacatatatattaagtttgctaccctgcagagcaatgctctgctt
atgtataaccacgacaaccagaccggggacaaggcagagttcctggctctggagatcttc
gagggacggatgcgcttctccttcaacctgggaagtggaacttacaaactcatgacgatg
atcaaagttgccgacgggcagttccacacggtcatcgccaggagagctgggatggctgct
tctttgactgtggacctgtgtggcgatgaccatgagccaggctattgtgctgttagcaat
gtagcagtgcacactgactggatcctggacgtgcagcccaaccggctctcagtgggaggc
gtcaggtcaatagaacccgtccttcatcggcgcggtcagatcgccacccacgactttgtc
ggctgcatcatggagttcgccgtcaatggccgcccgctggagccgagtcaggcgctggca
tcgcgtggcatccttgacagatgtccgagactggaaggagcctgcaccaccagcccctgc
agacacgggggcacctgtttggaccgctggtcctggcagcagtgccagtgcgtggacggc
ttcacgggcaaattctgcgagaagtacatgacggcggataccgccctgtccctggatggt
accggccggctggattactccctgaagcccggccccaaacgtgacgtcctgctgcgacag
tcgctgcagggcaggtcctctgaccgcgtcgggcccagcagcctggaggtgaagttcagg
acgcgcagcaagaccggcacgctgctgcacgtgcaggagagcagcaactacaccactgtg
aagctgaggaacggtaacatccactacatctcggatgcaggagtgggagggaaggtggag
cgcaccgtgggggacgccgtgctgtccgacggccagtggcacacgctgcagctggtcaag
aacggctcggctaccgtgctgcaggtggacagcggtcaccccagggtcatccagcatgtc
acgcaggactttggcggtctgggcgtgttgacgttttccctgggagggatcccgcctggg
ccggcgcaacaaaagacagcagcaggtttcgatggctgcctggcctttgtgaagtacaac
agggagagcctgccatttaccggagagcacagcctcgtcaccttaaccaagaccagctcg
tccgtcaagatcggctgcagaggtcccaacctttgcgagagcagtccgtgctgggatggc
ctgatgtgcgtcaaccagtggtacacgtaccaatgtgtcccgcccggtgactgttcttct
aatccctgccagaaccacggcagctgtgtgccggatgcccgctcaggtttcacctgcgtc
tgctccgagttttacacgggaaagacttgtgagaccttggtggcctgtttgggtgtccag
tgcccacagggtactgtctgcaaaacagccaacaatggcgggtttgtctgtagccccagc
cccactgcagagacaatggtcctccccatctgggcagtgccagcaattgtcggcagttgt
gccactgtccttgccttggtggttctcagcctgatcctgtgcaaccactgcaaggaccgc
aacaagactaaagtgccaaaggaacccaaggagaagaagccgaaggagaagaagaagaaa
aagaagaagggcagcgagaacgtcgcgtttgatgacccggataacatcccgccatatgga
gatgacatgacggtacggaaacaaccggaagggaaccccaaaccggacattattgagagg
gagaacccttacctgatctatgacgaaaccgacatcccccacaacaatgagactgtcccg
agtgctccctgtgctccctgcaatgtaccagaggcagatatcgagcactacgacatagac
aacgcgagcagtatcgctccttcagacgccgatatcatccagcactacaaacagttccgc
agtcacacacccaagttctccatccagagacacagcccactgggcttcgccagacagtca
cccttaccgcttggagcaacaagctacacctaccagccccagtacacgcaagcgctgagg
tccaccccattgagccactcccactcagcctgccccaccccaaatccgctctccagacac
tcgccagccccgttcaccaagccctcgtccttttaccgaaacactcctaccagagaactc
aacctggctcgccgtgagggcagcccactggacctgcacaatgacatgtgccagcctccg
cccatgttcaactatgccacccggctggggagacgcagcaagagtccgcagaccatggcc
agccacggccacacctccaggcccgggagtcggctgaagcagccgattgagcagatcccc
ctggagacggggcctcctgtggggctgtccattgaggaagtggagcgactgaatactcca
cgcccacgaaaccccagcatctgcagcgccgaccacgggcgctccagctctgaggaggac
tgtcgcaggccactgtcaagggtccgcaaccctgcagacggcatcccggcaccagagtcc
tcttcagaaagtgactctcatgactccttcacctgctcggagatggagtacgaccgggac
aaaccggtttcttacacctcccgggttcccaagctctcacaagtcaacgagtcagacgct
gacgatgaggactacagtgggaggctaaagcagaggcgctactcaagtcggagggcagaa
ggagggcctggtgtttcccaaatgcccccaagtgagcagcactacaccctgccccataaa
ctaggccagcaagctgggggcttcaactgggacaatctcttgaactggggccccggcttt
ggacattatgtggacgtattcaaggacttagccttgcttcctgagaacgcggcggcaaaa
gacattgaaatgaacagtggcgatggttcagtgaccattctaaacgaaggagaagctgag
caatatgtatga |