Solea solea (common sole): 131473967
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Entry
131473967 CDS
T10853
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
131473967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssoe04040
]
131473967
Ion channels [BR:
ssoe04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
131473967
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
131473967
NCBI-ProteinID:
XP_058507607
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All DBs
Position
15:25164651..25332950
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AA seq
1330 aa
AA seq
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MLAEAGGSVPHGSMRSSSDINRDSSSSSSSSNNPDSSIFFSKMEDVVIPFSSEVPCDNNG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKPKEAQKVINPANNQAADKT
GKGPDEKEEAVPVSEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSS
DPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFV
SVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHL
VENSGDPWENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMF
ASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEI
VFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDA
EDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIA
QSCLAQGLSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICE
LCYVKLKLLLIAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFYY
CKACHDDITDPKRIKKCGCKRLMDNIRPSFKKRSVNSASACSTNHFLDPPLSPPRNSANV
PLVNNRKGSLLPLTGPQPTAANASWLRLSLSGPGDPAAAAASRSLWAESRLSRARSLPVK
YRYHPSNAVLLSHSRNFEDEHPSALSPKKKQRNGGMRNSPNCSPKMMSRHDPLQIPGNEN
MENMDMNVKRYDSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLR
NLVMPLRASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNIN
LCDMCVILSANQNNIEDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSS
PDSSPVHGFVRQASVTTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAF
AVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRC
RVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSSPSQCTKRYVIT
NPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPPSNRQNRS
SKTRETRDKHNATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLI
PPIREVEDEC
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcgggcggctccgttccccatggctctatgaggagcagcagcgacatc
aaccgcgacagcagcagcagcagcagcagcagcaacaacccggactcgtcgatcttcttc
tccaagatggaagacgtggtcatcccgttctcgtcggaggttccctgcgacaacaatggc
cagcgcatgtggtgggctttcctcgcctcgtccatggtgacgttcttcgggggtctcttc
atcatcctgctgtggaggacactcaagtatctgtggactgtctgctgccactgcaacatc
aagcccaaggaggctcagaaggtgatcaaccccgccaacaatcaggcagcagacaagacg
ggaaagggtcctgatgagaaggaggaggcagttccagtcagcgaggtgggatggatgact
tcggtcaaagactgggccggcgtcatgatctcggctcagacgctcactggcagagttctg
gtggtcttagtctttgctctcagcatcggggccctcggaatatacttcatcgactcctca
gatcctatagaatcctgtcagaacttctacaaagatttcacgttacagatcgacatggcc
ttcaacgtattcttcctcctctactttggcctgcggtttatagcagccaacgataagctg
tggttctggctggaggtcaactctgtggtcgacttcttcaccgttcctcccgtgtttgtg
tccgtctacttaaacagaagctggctcggtctcaggttcttgagagcgctcagattgata
cagttctcggaaatcttgcagtttctgaatatcttgaaaacaagcaattccataaagctg
gtaaacctgtgttccatcttcatcagcacatggctcacagctgctggattcatacatttg
gtggaaaactcaggggatccttgggaaaacttccaaaattcccagtccctttcctactgg
gagtgtgtgtacttactgatggtgaccatgtccacagtgggatacggggacgtctatgca
aaaaccaccctgggtcgactcttcatggtcttcttcatcctcggcggtttggccatgttt
gccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcc
tatagtgcggttaatgggagaaagcatattgtggtctgtggtcatattaccctcgaaagt
gtctccaacttcctcaaagacttcctacacaaggacagggatgatgtcaatgtagaaatt
gtgtttctccataatatttcccctaatcttgagctggaagccttgttcaaacgccacttt
acacaagtggagttctaccagggatctgttctcaaccctcacgatctggccagggtgaag
atcgagtcagcagatgcctgtttaatcctcgccaataaatactgtgcagatcctgacgct
gaagacgcctccaacatcatgagggtcatttcgatcaagaactaccatcccaagatcaga
ataatcacgcagatgctccagtatcacaacaaggcccatctgctgaacattccgagctgg
aactggaaggagggtgacgatgctatctgcctggctgagctgaaggcaggcttcattgcc
cagagctgcctggctcagggcctgtccaccatgctggccaacctcttctccatgaggtcc
ttcatcgagattgaggaggacacatggcagaagtattatcttgaaggagtggctaatgag
atgtacacagagtatttgtccagtgcctttgtgggcctctccttccccacgatctgtgag
ttgtgctacgtgaagctgaagctgctgctcattgccatcgagtacaagtctgagcagaga
gagagcagaagccgaaagcgcatcctcatcaaccccggcaaccacgtcaagatgcaggag
ggaacgctgggattctttatcgcaagcgacgccaaagaagtcaagagagctttttactac
tgcaaagcttgtcacgatgacatcacagaccctaagaggatcaagaagtgtggctgcaaa
agactcatggacaacattagaccttcgttcaaaaagcgatcagtaaactccgcctccgcc
tgctccacgaaccatttcctggaccccccgctcagcccgccgagaaactctgccaacgtc
cccctcgttaataaccgtaaaggaagtctcctccccctcacggggccacagcccaccgcc
gccaacgcttcgtggctccgcctcagtctgtccggccccggagaccccgctgccgccgcc
gcgtccaggtccctgtgggccgagagtcgactgagccgggcccgcagtctgccggtgaaa
taccgctaccaccccagtaatgccgtgctgctcagtcacagtaggaacttcgaggacgag
cacccgtcggcgctgtcgcccaagaagaagcagcgcaacggagggatgcggaactcgccc
aactgctcgcccaagatgatgagtcgacacgacccacttcaaattcctgggaacgaaaat
atggagaacatggacatgaacgtgaagaggtatgattcgacaggaatgtttcactggtgc
ccgtcaaaggacatcgaaaaggtcatcctgactcggagtgaggcgtccatgacggtgctg
agcggccatgtggtggtctgtatatttggggatgtcacgtccgctttagtggggctgcga
aacctggtgatgcctttaagagccagtaacttccattaccacgagctgaagcccatagtg
tttgtgggctcgctggactatctgcggagagagtgggaaactttacacaactttcctaag
gtctccatcttacccggtacgccattaagtcgggcagatttaagggctgtcaacatcaac
ctctgtgacatgtgtgtaatactgtcggccaatcagaacaatatcgaagatacctcgctg
caggataaggaatgcatcttggcatcactcaacatcaaatctatgcagtttgatgacagc
atcggggtcttgcaggctaattcccaaggtttcacgcctcctggaatggacaggtcatct
ccagacagcagtccagtacatggcttcgtgcgccaggcgtccgtcaccaccggctccaac
atccccatcatcacagaactagtgaacgactcaaacgttcagttcctggaccaagacgat
gatgacgatccggacactgagctgtacctcactcaacccttcgcctgcggcaccgccttc
gctgtcagtgtcctcgactcattgatgagtgcgacgtatttcaacgacaacattctcaca
ctgattcggacgctggtcacaggaggagccacgccagagctggaggccctgctggcggag
gagaacgcgctgagaggaggttacagtacaccgcagacactggccaacagagacaggtgt
cgtgtggcacagctcgccctctacgatgggcctttcgctgacttgggggatggcggctgc
tacggggacttattctgtaaagctctgaagacgtacaacatgttgtgctttggaatctac
agattaagagatgctcatctcagttctccgagccagtgtacaaaacgatatgtgatcaca
aacccaccgtacgagttcgagctagtgcccacagacctgatcttctgcctcatgcagttt
gaccacaacgcaggccaatcgcggacaagcctgtcccactcttcccactcctcccattcc
tccagcaaaaagagctcctccgtccactccatcccgccctccaaccggcagaaccgcagc
agtaagacccgggagacccgtgataaacacaatgcaacaaggatgaatagaatgggccaa
gaaaagaaatggtttacagatgaaccagaaaatgcctatccacggaacattcagatcaag
cccatgagcactcacatggccaaccaagtcaaccaatacaaatccaccagtagtttgatt
cccccaatcagagaagttgaggacgaatgctga
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