Solea solea (common sole): 131474002
Help
Entry
131474002 CDS
T10853
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
ssoe Solea solea (common sole)
Brite
Enzymes [BR:
ssoe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
131474002 (tarbp1)
Transfer RNA biogenesis [BR:
ssoe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
131474002 (tarbp1)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131474002 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131474002
NCBI-ProteinID:
XP_058507684
LinkDB
All DBs
Position
15:complement(16916835..16929365)
Genome browser
AA seq
1623 aa
AA seq
DB search
MYSVLIDAVLSSSPDCERLLESLCWPAQTWPETERVEALTAFIQGLAPLLTASDKTPFTA
AQRRRIQDKIESVIWTQCLPLFASISAEPGEVVRCRESTAAACRLVSACVPLCDEAVPGR
VALSILPSLQLSDEESLSVEVSSEVMAALIPALSADEQLTLRTMSSALSCMKTLPVALVS
KVTVRLLLTLLKCCGGATLNSILRLVLDDLCSWHCAQRTPAVTERALLCLTVISDHLLTP
HSLSSSSSTTTCEPNPRLSLQFWRMVQDGLTHRDSVSRKRALYLLKRCVALSEEEQVECP
LSPSGEGETLFKWAPTRSKLLREFWEDYVLVMETLEENQVHVVRPVLNRIDTLIQTTVND
SQASGQGLFHPSWLLCVYQRMFHSENKSLMREGVCHLLELQVLQQPDFALAFSQFIVGPF
MDVLSETSLFYRSAEQSVGYSPELGAKLQVFLAVFFTSLPAEHRGCVLLELIQQLASKHW
CAVPLLFLSQALSKLPPSPLLGLDGLAALREVLRCTMITHQVLLRGAAQCFLLKSALCLT
DVSAVSLDDFFSFLMHFHADESLCRGTQVWNQLCVWLSDNEGRFKPRTVDGDHTSAATKK
ETIKGYVQDEIHAFLRVPASTGQTERLPDPKEAEKLARAILLCVDMEQCQLGTAMTNILE
LLLSPLLDTLSRVSTNIYLPLRKSDKSLQLVLQLFQLGQTPGCQSIGGELGDIVNVTLEK
QIFKLIDPIQDFILRRLCGELQELFDVERAELYLSVLSQLLASYSSTPHLHIKVQQNHFP
KLIKHNLTVLQESSQQIPSMTHQVARAVAMASLAKVCSLVEQEVIATRSETTFALKALND
YFYSSVPSVSQSQSSLGNFNKRLLKPQTGDLSCDLAVQGTLVKDWGRIAANFMRDQWICL
SFLIKTIGIPEISRSPETLKAALSCSVEALALLPSDLVLPVLTFMETLLPQLLITEEALC
VEAVTLSWDLVQTLSSNGQAFWPALKGFISMAFHRQLLELSHTQAVTFVATLKQIAADLI
ELSQAKSGVLGVLLQHCCQTWLPTDRSGGEKADGAFSSVFSHINILTEACVYGPVLRKDQ
RLLQDVQTYVEQLGDECTVKVIVASENRDEQFPRTCVLAFLSRLDSSNSEHETLMEAVVM
ALLKKDNDISKSKVRKNINALQHRITNRVWQTLLLLLPKLREEFVATLLNHVFEAGFCSN
QASVKYLIEWMMILILIRYPQQMDSFWACFNMDQEKTKTSICTFLSVLVHFDVIIPNLNN
KAAQLRKALNSILQWCFNHNFSVRLYALLALKRVWSLAEVHAEEGADGWGGLSSVIKACL
NQAEAMQSTGNANKNWIRIQEHFFFGAFHPIRDYSVETIFFTFPSLSELTDDEWIPPWKF
EKLSCFSESPSFPLKNPAPDLSQLQPGDWIQQDKGQQDQEERWAEVQKKITPWRLGIQEQ
EPELHLVPSQRAARLGKQHGALLVVASLIDKPTNLGGLCRTCEIFGASSLVLDSLRHIND
KLFQSLSVSSELWLPLLEVKPVELTDFLQEKKSEGYCIVGVEQTANSQSLQDYQFPEKTL
LLLGNEREGIPANLLQMLDVCVEIPQQGVIRSLNVHVSAALLIWEYTRQHLASGSAKVDA
KCS
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgtattctgttttaattgacgcagtcttatccagctctccggactgtgagcgcctgttg
gagtctctgtgctggcccgctcagacgtggccggagacggagcgggtggaggcgctgacg
gctttcatccagggactggcaccacttctgacagcctcggacaagactccgtttaccgct
gcgcaaagacgacgtattcaagataaaatagagtcggttatttggacgcagtgtctgcct
ctcttcgccagtatatcagcagaaccgggtgaagtcgtgcgctgcagggagagcacagcc
gccgcctgccgcctcgtgagcgcctgtgtcccgttgtgtgatgaggctgtgccggggcgc
gtggctctgtccatcctgccgtcactgcagctgtcagatgaagagtcactcagcgtggag
gtctccagcgaagtcatggccgctctcatacctgctctgtcagcagacgagcagctcaca
ctcaggaccatgtcttctgccttgtcctgcatgaaaacactccctgttgctctggtctcc
aaagtcacagtcagactcctcttgactcttctgaagtgctgcggtggtgccactttaaac
agcatcctcaggctggtcctggacgatctgtgcagctggcactgcgctcagcgcacacct
gcggtcacggagagggctctgctgtgtttgacagtcatctctgatcacctgctgacacct
cacagcctctcctcctcctcctccaccaccacctgtgagcccaaccctcgcctgtctctc
cagttctggaggatggttcaggatggattgacgcacagagacagcgtgtcacgtaagagg
gcgctctacctgctgaaaaggtgtgtggccctgtcagaggaggagcaggtggagtgtccc
ctctctccttcaggcgaaggtgagaccttgttcaaatgggctcccaccaggagcaagttg
ctcagagagttctgggaggattacgtgctggtgatggagaccctggaggaaaaccaggtt
catgttgtccggccggttctcaacaggatagacaccttgatccaaacaacagtgaatgat
agtcaagcttcaggtcaaggcctcttccacccatcctggctgctgtgtgtataccagcgg
atgttccacagtgaaaataaatccttaatgcgagagggtgtctgtcatctgcttgagctg
caggtcctccagcagccggacttcgctttggctttttctcagtttattgttggtcctttc
atggatgtgctgtctgaaacttcgctcttttacaggtcagctgagcagagtgtaggatat
tctcctgagctgggggccaaactccaagtcttcctggccgttttcttcactagcctacca
gcagaacacagaggttgtgttttgctagagctgattcaacagctggcctctaagcactgg
tgtgcggtgcctcttctcttcctctcccaggctctgtccaaactcccccccagccccctg
ctggggttggatggacttgcagctctaagggaggtgctgcgctgcaccatgatcacacat
caggtgttgttaagaggcgctgcccagtgcttcttactcaagagtgccctctgtctcaca
gacgtgagtgcagtgagcctagatgatttctttagtttcctgatgcatttccatgcagat
gagtcactgtgtagagggacacaggtctggaatcagttgtgtgtctggctgtcggacaat
gaaggccgtttcaagcccaggactgtggatggtgatcacaccagtgctgccacaaagaaa
gaaactatcaaaggctatgttcaggacgagatacacgcctttctccgagttccagctagt
acaggccagactgagaggttacctgaccccaaagaggctgagaagttggccagggcaatt
ctgctgtgtgtggatatggagcagtgtcaacttggcacagctatgactaacattctagag
ctgttactctctcctctgctggacaccctgagcagagtcagcacaaatatttacctgcct
ctgcgcaagagtgacaagagcctgcagcttgtgctacaactcttccagcttggacaaaca
ccaggttgtcagagtattggaggagagctgggtgacattgtgaatgttacattggagaaa
cagatttttaaacttatagatccaatccaggactttatcttgaggcgtctatgtggggag
cttcaggagttattcgatgttgagcgggcagagttgtacctgagtgtgctgagccagctg
ttggcctcgtacagttctacaccacatctccatattaaagttcagcagaatcatttccct
aaactcatcaaacacaacctcacagtcctccaggaatcaagccagcagatcccttccatg
acacaccaggtggctcgagcggttgctatggcatccctcgccaaggtttgcagtcttgtg
gagcaagaagtgattgccacaagatcagagaccacttttgctctgaaagcactgaatgac
tacttctacagctcagtgccgtctgtctcacaaagtcagtcgtcactgggaaacttcaac
aaacgtttgctaaaaccacagacgggagacctttcatgtgatttagcagtgcagggcaca
ctggtgaaggactggggacgtattgctgccaattttatgcgcgaccagtggatttgcctg
agcttcctgattaagacgattgggattcctgagatttccagatcgccagagactctgaaa
gctgctctgagctgcagtgtggaggctctggcactgctgcccagtgacctggtgctgcct
gtgctcacctttatggagacattactgccacaattgctaattactgaagaggcactctgt
gtggaggctgtgacgctgagctgggatctggtgcaaacactgagctccaatggccaagcc
ttctggccggccctgaaaggcttcatctctatggccttccatcgtcaactgctcgagctg
tcacacactcaggctgtgacgtttgtggccaccttgaaacagatcgccgccgacttgatt
gagctctctcaggcaaagagcggagtattgggagtgctgcttcaacactgttgtcaaacg
tggctgcccacagaccgaagtggaggcgaaaaggccgacggcgcgttttcaagtgttttc
agccacatcaacatcctgactgaggcctgtgtctatggacccgtactcagaaaggaccaa
cgactcctccaggatgtacaaacgtacgttgagcaactcggtgatgagtgtactgttaaa
gtcatagttgcaagtgaaaacagagatgagcagtttccccgcacatgtgtattggctttc
ctcagccgccttgattcttctaattcagagcacgaaacactgatggaggctgtagttatg
gctttgttgaaaaaggataatgacatatcaaagtcaaaagtgcgcaaaaatatcaacgcc
ctgcaacatcgcatcacaaacagagtttggcaaacactgctgctgttgctgcccaaactc
agagaggagtttgtcgccactttgctgaaccacgtgtttgaagctggattctgcagtaac
caggcttcagtcaaatacctgatcgaatggatgatgattctgatcctcattcgctatcca
caacaaatggacagcttctgggcctgcttcaacatggatcaagaaaagaccaagaccagc
atctgtactttcctgtcagtcctggtacattttgatgtgatcattcctaatctgaacaat
aaggcagcacagttgcgtaaagcactgaacagcatcctgcagtggtgtttcaatcataac
tttagcgtgcgtctgtatgccttgctggccctgaagagggtgtggagcctggctgaagtc
cacgcagaggaaggagccgatggttggggaggtttgtcctctgtgatcaaagcctgtttg
aaccaggctgaggccatgcagagcactggaaatgccaacaaaaattggataagaatccag
gagcacttcttctttggtgcctttcatcctatcagggattacagtgttgagaccatattc
tttacctttcccagtctgtcagagttgactgatgatgagtggattcctccatggaagttt
gagaaactgtcatgtttctctgaaagtccatctttccctttgaaaaatcctgcaccagat
cttagccagctccagcctggagactggatccaacaagacaaaggtcaacaggatcaggag
gaacgctgggctgaggtgcagaagaagatcactccctggaggttggggatccaggagcag
gagcccgagcttcacttggttccgtcgcaaagggctgctcgtctgggcaaacagcacggt
gctctgctagtggtcgcctcactgatagataaacccaccaatttaggaggtctgtgcagg
acatgtgagatatttggtgccagttctctagttctggatagccttcgccacatcaacgac
aaactctttcagtccctgagtgtctcatctgagctctggcttcctctgttggaggtgaag
cctgtggagctcaccgacttcctgcaggagaaaaagagtgaaggctactgtattgtcggg
gtggagcagaccgccaacagtcagagtctccaggattatcagtttcctgaaaagactctt
ttacttctgggcaatgaacgggaaggtattcccgccaacttgctgcagatgttggacgtc
tgtgtcgagatccctcaacaaggagtgatccgctccctcaatgtgcacgtgagcgctgct
ctgctgatttgggaatatacgcggcaacatctggcctccggttcagctaaagtcgacgca
aagtgcagctaa
DBGET
integrated database retrieval system
