Solea solea (common sole): 131474892
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Entry
131474892 CDS
T10853
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssoe01001
]
131474892 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssoe04054
]
131474892 (ciita)
Enzymes [BR:
ssoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
131474892 (ciita)
Protein kinases [BR:
ssoe01001
]
Serine/threonine kinases: Other
TAF1 family
131474892 (ciita)
Pattern recognition receptors [BR:
ssoe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
131474892 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
NPHP3_N
AAA_16
nSTAND3
AAA_22
AAA
LRR_At5g56370
NB-ARC
AAA-ATPase_like
Arf
TsaE
YopH_N
DUF815
RsgA_GTPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
131474892
NCBI-ProteinID:
XP_058508581
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All DBs
Position
16:19354591..19370821
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AA seq
1200 aa
AA seq
DB search
MHEVDQDPFDFGELPDDISEFMNDDYLLGTDIFFGDLWMNSEESSNFSDVAMPTDLPCPG
NHQQRQRHELSEQKIHRRKRQRVARSQQCTDTNTPSRPKRRRAAVFADKPQTKEVQDKAV
FNQMTDAGPEPCPAETTCLTTTPPRIVHLHPSLQLITIPDAPGCRVIQTLRFPPPVISLP
LPNTSPPPTYILVPSASPLYKRQLQPLSPVDDAVAPVQMSSSPPGSLSDSTSRSMSPHRI
LPLDPKIETSPCKESPFPQSPIVHDVPQAVKDYIQDVKDHMSHSCLDIEDGLNLTSHYVD
VQVSQREFLRSGKNTNRNLDKELIIMGDADRQKSLLGHRQIFRDVNGDNSKRYILLLGNA
GMGKTTLIKKLCLDWSSDCVPQFDFVFLLDGKALSLTRPIYSLQTLLLSLSSFVPSCMDP
DAVYAEILAASKRVLIIFDGFDELRNYESLLQTQDKELITSMQKDSKVETYTVRQLYSAI
LQRVLLPGCTLLLTTRPRGTANQLLRRVDSFLEVCGFTPADVETYLSQYFTDPALAASAL
DCLKNSSYLHFLCSNPGLCRFVCLVLEQSKTMTDLSKTLTGLCHQVVLSKIKRAHGENSE
AKTPTSLQSGEETQVQNSINGPLKKSHKQTRGRNGTHSRSLRSRGKRKLEQEVNKVDQEE
CVGRETGGTEQTELLLQLSSLAWEGVKANTPILPTGKTSSEKLQAFGLKSRLFLSYPLRR
MPVISHTNIDGEEREDKGKDRGRTDNEQTTDHIMYWANPFLQSYLAGVHLSLSRNVSDRT
FLQTLPFQSGSKGRRRPQREELELTQRFAVGLLFHNRTALQTLHSHTETSFRDMLVSKQA
VVAKHLQGLSLGDLSPSQVLEACHYVYEASFTCGDGFSDTCNTQLVSHLAANLPEVLSFR
GVPLKPPDVFIVQNILGKGETEGRSFCLDLEDSGIQVSGLRTLVGLNNINTYRACISDVI
TLWEQLVQCGEEGLLRGAVSKFKIHPLKVTQVCQVQHLAKLVDIHMHKRLQGSCNQSDSI
LAEGVPAVKELHKLEFELGPEKGPLGLPKLWELLPGLHNLRHLDLENSKIGDKGSEKLAA
ALTSLCSLEILNLSQNCIGDQGVTKLSNTVKCLPKLHRLSLYSNVISDEGAESLAAVLPH
MSSLADLDVKYNKLTDVGAQSLGASLRNCQKIKTLRMWNQCIPYGVFERLQQQDSRILLH
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtagatcaggacccctttgattttggggagctacccgatgacatatctgaa
ttcatgaacgatgattacctattgggcacagacattttctttggtgatttgtggatgaat
agtgaggagtccagcaacttcagtgacgtcgctatgccaacagatctgccatgcccaggc
aaccaccagcagaggcagaggcacgaactaagtgaacaaaaaatccacaggagaaaaaga
cagagggttgcccggtcacagcagtgcactgacactaacactccgtccagaccgaaaaga
cgcagagcagcagtttttgcagataaaccacaaacaaaggaggtgcaggataaagctgtt
ttcaaccaaatgactgatgcaggaccagagccatgtcctgcagagacgacatgccttaca
accactccaccaagaattgttcacctccatccctcccttcagctcatcaccatcccagat
gctccgggatgtcgggtcattcagacgctgaggttcccccctcctgttattagtcttcca
ctgcccaatacatctcctccacctacatacatattagtcccttctgcctcaccactctac
aaacgccaattgcagccactctccccagtggatgatgcggtagcaccagtccaaatgagt
tcatcgccaccaggatctctgtcagactccaccagcagatcaatgtctccccatcgtatt
ttaccactcgaccccaaaattgagacgtccccatgtaaagaatccccgtttcctcagtct
cccattgtccatgatgttccacaggctgtaaaagactacattcaagacgtcaaagaccac
atgagtcactcctgcctggatatagaggatggccttaatctgacctctcattatgtggac
gtgcaagtgagccagagagagtttcttcgctctgggaaaaacacaaacagaaacctggac
aaagagctaatcatcatgggagatgcagatcggcaaaaaagcttgttgggacatcgacag
atcttcagagacgtaaatggagataactccaagcgctacatactgctgcttggcaatgca
ggcatgggaaagaccacactcatcaagaaactgtgccttgactggtcctcagactgcgtc
cctcagtttgactttgtcttcttattagatggcaaagctctctctttaacgaggccaatc
tatagtctccagacccttcttttaagtctctcctcctttgttccttcttgcatggaccca
gacgccgtctatgctgaaatccttgcagcctctaagcgtgtgctcatcatttttgatggg
tttgatgagttgcggaactatgaatccctgctccagactcaagacaaagagttgataaca
tcgatgcagaaggacagtaaagtagaaacctatactgtaaggcagctgtactctgccatc
cttcaaagggtccttcttcctggatgcactcttctgcttacaacacggccaagaggaact
gccaatcagctcctacgccgcgtggatagctttctggaggtctgtggcttcactcccgca
gatgtcgagacttatttgtcccagtacttcacagatcctgccctcgcagcatctgctttg
gactgcttgaagaactccagctatctacatttcctctgctccaaccctggactatgtcgg
tttgtttgcttggtgttggaacagtccaaaactatgaccgacctatcaaaaactttgaca
gggctctgccatcaagtggttctctcaaaaataaaaagggcccatggggaaaactcagaa
gctaaaacaccaacatccctgcaatctggagaagaaacccaggtacaaaactcaattaat
ggcccattgaaaaagagccacaaacagactcgtggtcgcaatggcactcactctcgcagc
ctaagatcaagagggaagagaaagctggagcaagaagtgaataaagtggatcaagaagag
tgtgttggaagggagactggtggaactgagcagacagagttgctcttgcagcttagctct
ctggcctgggagggggtcaaagccaatacgcctatccttcccacaggaaagacctcatct
gaaaaactccaggcttttggcctcaagtcaaggcttttcctttcttaccctctgaggagg
atgccagttatatcacacactaatattgatggggaagaaagagaggacaagggaaaggac
agaggaaggacagacaatgaacagacgactgaccacatcatgtattgggccaaccccttt
ctccagagttacctggcaggtgtacatctatctctgtccaggaatgtgtcggaccgcacc
ttcctccagaccctgcctttccagtcaggctccaagggacgtcggcgaccacaaagggag
gaactagaactcactcagcgatttgcagttggcctcctgtttcacaacagaacagcgctg
cagacacttcactcacacacagagacgtccttcagggacatgttggtcagcaagcaggct
gtcgtggcaaaacacctgcaaggtctttcacttggtgacctgagtccttcgcaggtcctg
gaggcctgtcactatgtgtatgaagcgagtttcacatgcggcgatggattcagtgacact
tgcaacacacaactggtttctcacctcgcggcaaatcttccagaggttttgtcatttcgt
ggggttccgctgaaaccgccagacgtgttcattgtgcagaacatactagggaagggtgaa
acggaaggtcgaagtttctgtttggatctggaagattctgggattcaggtttctggactg
aggactctggtggggctcaacaacatcaacacatacagggcgtgtatttccgatgtaatt
accctgtgggagcagcttgtgcagtgtggtgaggaggggctcctacgaggggcggtgtcc
aagttcaagatccaccctctcaaagtcacacaggtgtgtcaggtgcagcacctggcaaag
ctggtggacattcatatgcacaagaggctgcagggcagttgcaaccaatcagattccatc
ctggcagaaggggtaccagccgtcaaggaactacacaagctggagtttgagcttggccca
gagaaaggtccactgggtcttcccaagctgtgggagctcctgccaggtctacataacctg
cggcacctagatcttgagaatagtaagataggggacaaaggatcagagaaattggctgct
gctttaacgtcactttgttccttggaaatactgaatctatctcagaattgtataggagac
caaggggtgacaaaactgtcaaacacagtgaagtgtctgcccaaactgcaccgtttaagt
ctttacagtaatgtgatttctgatgaaggggctgaaagtctggcagctgttctcccacac
atgtcttctctcgctgacctggatgtgaagtacaacaagctgacagatgttggagcacag
agtctcggagccagtctgagaaactgtcaaaagataaaaactttaagaatgtggaaccag
tgtattccatacggagtgtttgagcgtctccagcagcaagacagccgcatcctcttgcat
taa
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