Solea solea (common sole): 131475080
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Entry
131475080 CDS
T10853
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131475080 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoe03021
]
131475080 (smarca4a)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131475080 (smarca4a)
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131475080 (smarca4a)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
131475080 (smarca4a)
Chromatin remodeling factors
BAF complex
131475080 (smarca4a)
PBAF complex
131475080 (smarca4a)
GBAF(ncBAF) complex
131475080 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
131475080
NCBI-ProteinID:
XP_058508907
LinkDB
All DBs
Position
16:complement(22271884..22289862)
Genome browser
AA seq
1663 aa
AA seq
DB search
MSTPDPPMVGTPRPGPSPGPGPSPGGIMGPSPGPSPGSAHSMMGPSPGPPGTVHPHPPQG
PSAYPQENMHQMHKPMEAMHEKGMMPDDPRYAQMKGMGMRPGGHSGMGPPPSPMDQHSQG
YPSPLGGSEHAPSPVPANGPPSGPMIPGGPPGPGAGPMEGSGDPNQGMGQPNRGGPPPVG
PVGGPGAAGGPTPFNQNQLHQLRAQIMAYKMLTRSQPLPEHLQMAVQGKRPMPGMQQQPV
PNMPPSAGPVGGPGPGPGPGPAPANYNRPPHGMVGPNMAPPGPAGVPPGMQGQPNNGPPK
SWPEGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPM
MLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKANIE
LKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIE
QERKRRQKHQEYLNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIE
KERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKK
KKKKKPAPPEDGAAVLGPDGEPLDETSQMSDLPVKVIHVDSGNILTGVEAPKAGQLETWL
EMNPGYEVAPRSDSEESGSEEEDDEEEEEEQPPSTSTPAAATAAAAAAAAAAAAAAEEKK
KIPDPDTEEVSEVDVQHIIEHAKQDVDDEYGNASFNRGLQSYYAVAHAVTERVDKQSSLL
INGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMENKRINGPFLII
VPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPILRSGKFNVLLTTYEYIIKDKQV
LAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLL
PTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLP
EKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP
YMFQHIEESFSEHLGYTGGVVSGAELYRSSGKFELLDRILPKLRVTKHKVLLFCQMTTLM
TIMEDYFGFRNFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFVFLLSTRAGGLGLNLQSAD
TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI
QAGMFDQKSSGCERRAFLQAILEHEEQDEVGARGGCRSRGAWEEDEVPDDETVNQMIARS
EEEFELFMRMDLDRRREDARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGR
GSRQRKEVDYSDSLTEKQWLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGPATPSSSS
GRGRDKDEEVKKAKKRGRPPAEKLSPNPASLTKKMKKTVDAVIKYKDGNGRQLSEVFIQL
PSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYE
DSIVLQSVFTSVRQKIEKDDESEGEESEEEEEELDEGSESECEFEKSRSVKVKIKLSRKE
KGDRGGKGQRRRGRGARAKPVVSDDDSEDEQEEERSASGSDED
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgacccgccgatggtagggacacctcggcctggaccctccccaggccca
gggccatctccaggaggcattatgggaccaagcccgggaccctcaccaggctcagcccac
agtatgatggggcccagcccaggacctcctggaactgtacaccctcatcctccacaggga
ccctcagcatatcctcaggagaacatgcaccagatgcacaaacccatggaagccatgcat
gagaagggaatgatgcctgatgaccctcgctatgcacagatgaagggcatgggcatgaga
ccagggggacacagtggtatgggacctcctccaagccccatggaccaacattcccaaggt
tacccttcaccattgggtgggtcagagcatgcacctagccctgtcccagccaatggccct
ccctctggccccatgatacctgggggtccgcctggtcccggggcaggacctatggagggc
agtggtgatcccaatcagggcatgggtcagcctaaccgtggtggtccccctccagttgga
ccagtaggtggacctggtgctgcaggtggacccactcctttcaaccagaaccagttgcac
caactcagggcccagataatggcttacaaaatgctgacacgcagtcagcctctaccagag
cacttgcagatggctgtgcaagggaagaggcccatgccagggatgcagcagcagccggtg
cctaacatgccaccttctgcaggacctgtaggtgggcccgggcccgggcctgggccggga
ccagctccagccaactacaacagaccaccacatggcatggtaggccccaacatggcacct
cctggacctgcaggcgttccccctggtatgcaaggccagcccaacaatggacctcctaaa
tcatggcccgaaggacctatggtgaatgctgctgctccatcaaacccacctcagaagctg
attccacctcaacccactggcagaccgtcccctgcgcctccctccgtgcctcctgctgcc
tccccagtcatgccccctcagacacagtccccaggccagcctgcccagcctccccctatg
atgctccaccagaagcaaaaccgcataaccccaattcaaaaaccccgtgggctggaccca
gtggagatccttcaggagagggaatacaggttgcaggcccgcattgctcatcgaatccag
gagctggagaacctgcccggctctttagctggtgacctgcgtactaaggccaacatagag
ctcaaggccctgaggctgcttaacttccagagacagctgcgtcaggaggtggtggtttgc
atgcggcgtgacactgctttggaaactgcccttaacgcaaaggcctacaaacgcagcaaa
cgtcagtctctacgtgaggcccgcatcacagagaagcttgaaaaacaacagaagatcgaa
caggagaggaaacgtcgtcagaaacaccaggaatacctcaacagcatcctgcagcacgcc
aaggactttaaggagtaccatcgctccattacagcaaagctccagaaggccaccaaagct
gtcgccacctatcatgccaacaccgagcgcgaacagaagaaagagaacgagcgcattgaa
aaagagagaatgcggaggcttatggctgaagatgaagaaggttatcgtaaactcattgac
cagaagaaagacaagcgtctggcctacttgctgcagcagacagacgagtacgtggccaat
ctcactgagctggtgcgtgcccataaagccgtacaagctctcaaagagaagaaaaagaag
aagaaaaagaagaagccagcgcctcccgaggatggtgctgctgttctgggacctgatgga
gagcccttagatgagaccagtcaaatgagcgacctaccagtgaaggtcatccatgtggac
agtggaaatatcttgactggggtagaagcacctaaggctggtcagctagagacttggctt
gaaatgaacccaggatatgaagtagcgccgcgttcggacagtgaagaaagtggctcggaa
gaggaagatgatgaggaggaggaagaggagcagcctccctccacttcaactccagccgca
gcaacagcagcagcagcagcagctgcagcagcagcagcagcagcagcagaggagaagaag
aagattccagaccctgacactgaagaagtatctgaagtggatgtccagcacatcatcgaa
catgccaagcaggatgtagatgacgagtacggtaatgcaagcttcaacagaggcctgcag
tcctactacgctgtggcccatgcggtcaccgagagagtggataaacagtcctcactgttg
atcaatggccagctcaagcaataccagatcaaaggtctggagtggctggtgtccctgtac
aacaacaacttgaatggcatcctcgctgatgagatgggtcttggaaaaaccatccagacc
attgccctcatcacttacctcatggagaacaagcgcatcaatggacccttcctcatcatt
gtacctctctcaactctttcaaactgggtttatgagtttgataagtgggcgccatctgtg
gtcaaggtctcgtacaaggggtctccagctgctcggcgtgcatttgttccaatcctgcgc
agtggcaagttcaatgtgctcctgaccacttacgagtacattatcaaagataaacaagtg
ctagcaaagctgcgttggaaatacatgatcgtggacgagggccaccgcatgaagaaccac
cactgcaagctgactcaggtgttgaacacgcactacttggcccctcggcgtgtgctcctc
accggtacaccgctgcagaacaagctacccgagctctgggccctgctcaacttcctcctg
cccaccatcttcaagagctgcagcacattcgaacagtggtttaacgcccccttcgccatg
actggagagaaggttgacctaaatgaagaagagaccattctgattattcgtcgtctacac
aaagttctccgacctttcttgctgcgccgactcaagaaggaagtggaggcccagctgcct
gagaaggtggagtatgtgataaagtgcgacatgtcagccctacagagggttttgtacaga
cacatgcaggctaagggtgtgctgctcacagatgggtcagaaaaagacaagaagggtaaa
ggaggcacgaagaccttgatgaacactatcatgcagctgagaaagatttgcaaccatccc
tacatgttccagcacattgaggagtctttctctgagcatcttgggtatactgggggagta
gtctctggagccgaactgtatcgctcctctgggaagtttgagctacttgatcgtatcctg
cccaagctgagggtcaccaaacacaaagtgctgctcttctgtcagatgacaacactcatg
accatcatggaggactactttggattccgcaacttcaagtacctgcgtctggatggaacc
actaaggcagaggaccgtggcatgctgctcaagacattcaatgaaccaggctctgagtac
tttgtattcttgcttagtaccagggctggaggcctgggcctcaacctgcagtctgctgac
acagtcatcatctttgacagcgactggaacccacatcaggacttgcaggcacaggacaga
gcccacagaatcggtcagcagaacgaggtgcgcgtcctccgcctctgcacggtcaacagt
gtggaggagaagatcctggcagcagccaagtacaaattgaacgtggaccagaaggtcatc
caggctggcatgttcgaccagaagtcctccggctgtgagcgccgcgccttcttgcaggcc
attctggagcacgaggaacaggacgaggtcggggctcgaggaggctgccgcagtaggggg
gcgtgggaggaggacgaggttcccgatgatgagactgtcaatcagatgattgccagaagt
gaagaagagtttgaactattcatgcgcatggatctagaccgacgccgcgaggacgctcga
aacccgaagaggaagcctcgtctgatggaagaagatgatatgcccagctggattttgaaa
gacgatgccgaggttgagaggcttacgtgtgaggaagaggaggagaagatgttcggcaga
ggatcccgccaacggaaggaggtggactacagtgactctctcactgagaaacagtggctc
aaggccatagaagaaggcaatctagaagacatcgaagaggaggtgcgtcacaaaaagaca
actaggaagcgcaagagagaccgcgaccacgacggcccggccacgcccagctccagcagc
ggacgagggcgggacaaggacgaggaggtgaagaaggcaaagaaacgcggtcgcccgcct
gccgagaaactctctcccaacccggcttccctcactaagaagatgaagaagactgttgat
gctgtcatcaaatataaggatggtaacgggcgacagctcagtgaagtcttcatccaactg
ccctctcgcaaggagctgcccgagtactacgagctcatccgaaaacctgtggacttcaga
aagattaaggagaggattaggagccataagtatcgcagcctcaacgacctggagaaggac
gtgatgctgctctgtcaaaatgcccagactttcaacctggaggggtcgctgatctacgag
gactccatcgtgctgcagtctgttttcaccagcgtgagacagaagatcgagaaggacgac
gagagcgaaggagaagagagtgaggaagaagaggaggagctagacgaaggctcggagtct
gaatgtgagtttgagaaatctcgctcagtaaaggtgaagattaagctgagccggaaagaa
aagggcgatcgtggaggaaaaggacagcggcgaaggggccgcggcgcccgcgctaaacct
gtggtgagcgacgatgacagtgaggacgaacaggaagaggagcgttcagccagcggcagc
gacgaggactga
DBGET
integrated database retrieval system
