Solea solea (common sole): 131475104
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Entry
131475104 CDS
T10853
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04010
MAPK signaling pathway
ssoe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131475104 (cacna1ha)
04020 Calcium signaling pathway
131475104 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssoe04040
]
131475104 (cacna1ha)
Ion channels [BR:
ssoe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
131475104 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
131475104
NCBI-ProteinID:
XP_058508951
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All DBs
Position
16:18970828..19012938
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AA seq
1861 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVACQSEWCRILLALDDCIFAFFAMEMVIKMVALGIFGPNCY
LGDKWNQLDFVIVMAGMMEYSVDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLGENIITMYNLSLNSYYMSEEGEDS
PFICSAARENGMLRCHDVPPYSEGGAECSLEAPHQSSSPLIGSLPVVGGASVNGCVNWNQ
YYNVCQPGSLNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILL
IIVGSFFMINLCLVVIATQFSETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLR
YISHLYRKFTRRVQRIYSGWHSKRRKKVNPNGSGGGSNGGGNGHGHGSSRGCGGSGPNSA
FWLRPIHNLLQHHQHQHCRLSNGSQHAISVEGTEDMDREGGIGGGGGGGEELEMKSLSAQ
RGSTNENNSGSGGAGNSSVVTHGVGVLLGRLNGGMNYPTILPSFVCSYSSKTPPPHSQQC
RPSPEQHPPSHTASDHTETLNKLYQLMGQHSRQRLLYQLAGVVPSPLLLELLSCPLCARS
LETLELELGDLEGGRGEADGLHDFPQVGHLRGGRGRGRRQGVVDYKNGVVRAWVGFREKL
KRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEELTDVLEISNIVFTSMFVLEMGFMLLA
FGLFGYIRNPYNIFDSIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPALRRQLV
VLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSIQMKNGDTIPDRKNFDSLLWAIVT
VFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANR
SESDDEKKSDNFEEDEKVEQLRDTELKMYSLMMTANGHVDPHSSMAPPIIMRTAATPMPT
PKSSLGPESFLGDELVRGEVGFSETICGHAESRRGSSASMDPLAYDQHSLCLSSPGRRSP
LPPRGSGSSWGSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGGEEEDGGEDTLEPAGNN
RLRPGSLEVLQASTLMPSIIAEYGDCNGRTRTYDPNMNSTDSKDDSLPEDDIDDDSSFCL
WIKKELLNLKPRWCKEHEDWGLYLFSPENQFRVWCQAVISHRLFDHIVLVFIFLNCITIA
LERPNIQPHSTERVFLSVSNYVFTVIFFAEMAIKVSALGFCFGKQSYLQSSWNVLDGLLV
FVSLVDILVSMASSGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGN
IVLICCAFFIVFGILGVQLFKGKFYHCEGLDTKNVTNKSDCLQANYRWIRRKYNFDNLVQ
ALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVG
VVVENFHKCRQDQEEEEARLREEKRLKMIEKKRRSKENGGAEAKQRPYYADYSPLRLSIH
TLCTSHYLDLFITFIICINVVTMSIEHYNQPQYLEEVLKYCNYVFTIIFVIEALLKLVAF
GIHRFFKDRWNQLDIAIVALSIMGITLEELKMSAALPINPTIIRIMRVLRIARVLKLLKM
ATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCDDNNPCEGLSRHATF
KNFGMAFLTLFRVSTGDNWNGIMKDTLRECPPDDDRCLTYLPLVSPMYFVTFVLMAQFVL
VNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMAMERERKLSITSNSSSVDGAYVGPCPQ
SPGQEEEVQYKDQDLLSSRKMSVSRMHSLPNDSYMFRPVRPASAPYPLEEVDPQQQHSVR
I
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgtgtgactctggggatgttccagccctgcgaggacgtc
gcctgccagtcggagtggtgccgcatcctgctggcactggacgactgcatctttgctttc
tttgctatggaaatggtcatcaagatggtggccttgggaattttcggccccaactgttac
cttggtgacaagtggaaccagcttgactttgtcattgtcatggcagggatgatggagtac
tctgtggatggccataatgccagtctgtcagccatccgtaccgtccgtgtgctcaggcca
ctgcgagccatcaacagagttccaagtatgcggatcttggtaacactgctgttggacacc
ctgcccatgttaggaaatgtcctcctcctctgcttctttgtctttttcatctttggcatc
gtgggagtccagctgtgggcaggacttctgcgcaaccgctgcttcctgggagagaatatc
ataacaatgtacaacttgtccctgaattcttactacatgtctgaggagggtgaagacagt
ccattcatctgctcagccgcccgcgagaatgggatgctgcgctgccacgacgtgccgccc
tactccgagggcggcgccgagtgttcactggaagcgccgcatcaaagctcttcgcctcta
attggatcgctccccgtggtgggaggagccagcgtaaatggctgcgttaactggaaccag
tactataatgtgtgtcaacctggaagcctcaaccctcacaaaggagctgttaactttgac
aatattggctacgcctggatagccatattccaggtcatcacactggaaggatgggtcgat
atcatgtactatgtcatggatgcacactccttctacaattttatatattttatactgctc
attattgtgggctctttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttc
tcggagacaaagcagcgggaaaatgccctgatgagggagcagcgtgcgcgctacatgtcc
aacgactcaacgctcgccagttacagcgaaccgggttcctgctatgaagagatgctacgc
tacatcagtcacctttatcgcaagtttacacgcagggtgcagaggatatactctgggtgg
cacagtaaacgacgtaaaaaggtgaatcccaatggcagtggtggaggcagtaatggtggg
ggtaacggacatggccacggctccagcaggggctgtggaggatcaggcccaaatagtgca
ttttggctgaggccgatccataacctactgcagcaccatcagcaccagcactgtcgcctc
agcaacggcagccagcacgccattagtgtggaaggtactgaggacatggacagagaggga
ggcattggaggaggaggaggaggaggagaggagctggagatgaagtcactttctgcccag
agaggaagtacaaatgagaataacagcggtagcgggggagccggcaactcatctgttgtt
acccatggcgtgggtgtactgctcgggcggctgaatggggggatgaactacccgaccatc
ctgccatcgtttgtgtgcagctacagcagcaagacgccaccacctcactcgcagcagtgc
agacccagtccagagcagcacccaccgagtcacacagcgtctgaccacacagagacgctg
aacaagctctaccagctcatgggacagcacagtcgccagcggctgctgtaccagctggcc
ggcgtggtgcccagccctctgctcctggagctgctcagctgccctctatgtgcgcgcagc
cttgagaccttagagctggagctgggagaccttgagggtggcagaggagaggcggacgga
ctgcacgacttcccccaggtgggacatctgagaggtggaagaggtcgaggccgtcggcaa
ggggtggtggattataaaaacggagtggtccgcgcctgggtagggttcagggaaaaactg
aagaggattgtggagagcaaatactttaaccgggggatcatgatcgctatcctcgtcaat
actctcagcatggggatagagtaccacgagcagcctgaggagctgactgacgtgttggag
atcagtaacatcgtcttcaccagcatgtttgtcttggagatgggcttcatgctgctggct
ttcggcttgtttggatacatcaggaacccatacaacatttttgatagcatcattgttatc
atcagtgtgtgggagatcattggccagtcagacggcgggctctcagtgctgcggacgttt
cgtctgctgcgggttctgaagctggttcgctttctgcccgcgctgaggagacagttggtg
gtgctgatgaagaccatggacaacgtggccaccttctgcatgctgctcatgcttttcatc
ttcaccttcagtatactgggcatgcatctgtttggctgtaaattcagcatccaaatgaag
aatggagacacaattcctgaccgcaagaactttgactctttactctgggccattgttact
gtgtttcagattctgacccaggaggactggaacgtagtgctgtataacggcatggcttct
acctctccgtgggcagcgctctactttgttgctctcatgacgtttggcaactatgtgctt
ttcaatttacttgtggccatcttggtcgagggcttccaggccgagggtgatgccaatcgg
tcggagtcggacgatgagaagaaatcagacaactttgaggaggacgaaaaggtggaacag
ctcagagacaccgagctaaagatgtactctctaatgatgacagccaacggtcacgtagac
ccacacagctccatggctcctcctataatcatgcggacggcagcgacgcccatgcccact
cctaagagctccctgggccccgagtcgttccttggggacgagcttgtcagaggcgaggtg
ggcttttcggagacaatatgtggtcacgcggagtctcgccgtggaagttccgcctccatg
gatcctttagcctacgaccagcactctttgtgtctctcaagtccaggccggcgctcccct
cttcctccccgtggctccggcagctcctggggaagtcgccgctcgagttggaacagcctg
ggaagagcgccaagcctgaaaaggcgcgacaccagcggagagagggagagccttctgtcc
ggggagggaggggaagaggaagatggtggggaggatacactggagcctgctggaaacaac
agattgcggcctgggtccttggaggtgctacaggcgtccactctcatgccttccataata
gctgagtatggcgactgtaacgggaggaccaggacttacgaccccaacatgaactcgaca
gatagcaaggacgactcattgcccgaagatgacatagacgatgatagctccttttgcctc
tggatcaagaaggagctccttaacctgaagccccgctggtgcaaagagcatgaagactgg
gggctgtatttgttctccccagaaaaccaattccgtgtttggtgccaagctgtaatctcc
cacagactgtttgaccacatagttcttgttttcatcttcctcaactgcatcaccatcgct
ctggaaagaccaaacatccagccgcacagcacggagcgagtctttctgagtgtgtccaac
tacgttttcactgtgatcttctttgcagaaatggccattaaggtttctgctctcggcttc
tgctttgggaagcagagctacctccagtccagctggaatgttctggacggtttgttggtc
tttgtgtctctggtggatattctggtctctatggcctctagtggaggaaacaggatcctg
ggcatcctcagagtcctgcgcctgctacgaacactacgcccactcagggttattagtcga
gcccctgggttgaagctggttgtggaaactctcattacttctctcagacctatcgggaac
atcgttcttatctgctgcgccttcttcattgtctttggcatcctgggggttcagctattc
aaaggcaagttctaccattgtgaaggtctggacacgaaaaacgtcacaaacaagtccgac
tgtctgcaggcaaattaccgctggatacgaaggaagtacaactttgacaacctggtccag
gcgctgatgtccctgtttgtgctgtcgtgtaaggatggctgggtgaacatcatgtatgat
gggctggatgcagtgggagtggaccagcagcctgtgagaaaccacaatccctggatgctg
ctctacttcatctccttcctgctcattgtcagcttcttcgtcctgaacatgttcgtcggc
gtcgtggtggagaacttccacaagtgccggcaggaccaggaagaggaggaggctcgctta
cgggaggagaagaggctcaaaatgatagagaaaaagcgcaggagtaaggagaatggaggg
gctgaggccaagcagagaccttactatgcagactactctcccctgcgactgtccatacac
acactgtgtaccagccactacctggacctcttcatcaccttcatcatctgcatcaacgtc
gtcaccatgagcatcgagcactacaaccagccgcagtatttagaggaggttctgaagtac
tgtaactacgtgtttaccatcatcttcgtcatcgaggccctgctcaaacttgtggccttt
ggcatacacaggttcttcaaagacaggtggaatcagctggatatagcgatcgtggccttg
tccatcatgggcatcacactggaggagctgaaaatgagtgcagccctgcccataaacccg
accatcatcaggattatgagagtactccgaatagccagagtgctgaaacttcttaagatg
gccacggggatgagagctctgctggatactgtcatgcaagcgctgccacaggtgggaaac
cttggtctcctcttcatgctgctcttcttcatctatgctgcgctgggagtggagctcttt
ggcaaactggattgcgatgacaacaacccgtgtgagggcctgagtcgccatgcaacgttt
aagaattttgggatggccttcctcacgctgttccgagtgtccaccggagacaactggaat
gggattatgaaagatactttaagggagtgtcctccggatgacgaccgctgtctcacctac
ctgcccctggtctctccgatgtactttgtcacctttgttctcatggcccagtttgtgctg
gtcaacgtggtggtggctgttttgatgaaacatctggaggaaagcaacaaggaggctaaa
gaggatgcagagatggatgcagagattgccttggaaatggctatggagagggaacgcaaa
ttaagcatcacctctaacagcagctcggtggatggagcctatgttggaccatgtccacag
tcacctggacaggaggaggaagtccaatacaaggaccaagacctgctgtcatcaaggaag
atgtctgtatccaggatgcactcactgcccaatgacagctacatgttccgacctgtgcga
cccgccagcgctccctaccctttggaggaggttgatccccagcagcagcattcagtcaga
atctaa
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