Solea solea (common sole): 131475190
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Entry
131475190 CDS
T10853
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04120
Ubiquitin mediated proteolysis
ssoe04137
Mitophagy - animal
ssoe04144
Endocytosis
ssoe04340
Hedgehog signaling pathway
ssoe04350
TGF-beta signaling pathway
ssoe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131475190 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
131475190 (smurf1)
04350 TGF-beta signaling pathway
131475190 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131475190 (smurf1)
04137 Mitophagy - animal
131475190 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
131475190 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131475190 (smurf1)
04121 Ubiquitin system [BR:
ssoe04121
]
131475190 (smurf1)
03029 Mitochondrial biogenesis [BR:
ssoe03029
]
131475190 (smurf1)
Enzymes [BR:
ssoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131475190 (smurf1)
Membrane trafficking [BR:
ssoe04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
131475190 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
131475190 (smurf1)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
HECT type E3
131475190 (smurf1)
Mitochondrial biogenesis [BR:
ssoe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131475190 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
131475190
NCBI-ProteinID:
XP_058509099
LinkDB
All DBs
Position
16:20465710..20481667
Genome browser
AA seq
732 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQESRLQTQRIRGQDSRSHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKESSQTPQMDMGGEDGGGGGVGGGSGGGEGDVAARYERDLVHKLKLL
RHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAR
EWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHY
INGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKF
SQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDH
KELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGST
RVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLL
TAVEETCGFAVE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactaggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaaccttgcaaagaaagacttctttcgtctgccagatccatttgccaaagtt
gtggtggacggatcaggtcaatgccactcgacagacacagtcaaaagcacactggatccc
aaatggaatcagcactatgacctctacattggaaagacagactccatcaccataagtata
tggaaccacaaaaagattcataaacgacagggggcaggcttcctgggctgtatacgactt
ctgtccaatgctataagcagactaaaagacacaggataccagcgtttagatctatgtaag
ctcaatccctcagacagcgatgcagtgcggggacagattgttgtgagtttacagacacga
gaccgtatcggtagcggaggccctgtggtggactgcagaggactgcttgaaaacgatggg
cctgtatttgagggatgtttcagtgaagagccactgccctactctgaccccactggtgcg
gcggggggcgggaactgccggctcgattcgcccagtcaggagagccgtcttcagactcag
cgaatcagagggcaggactccagaagtcatggccacacccctcagaacagacctcacggt
catcaaccgcctgacctaccagagggatacgagcaacgaacaacagtccagggccaggtg
tacttccttcatacacagacgggcgtcagtacctggcacgatcctcggataccacgagac
ctggccagtgtcagctgtgaggagcttggtccgttgccagtgggctgggaggtccgaagc
actgtgtcaggtcggatctactttgtggatcacaacaaccgaaccacacagttcacagac
ccacgcctacacacaattatcagccagcaatcccaagcaaaggaatcctcccaaaccccc
caaatggatatggggggtgaggatgggggaggtggaggagtgggtggtggtagtggagga
ggagaaggagacgtggcagcgcgctacgaaagagacctggtccataagttgaagctcctg
cggcacgagctgtctttgcagcagcctcaagcaggacattgtcgcatagaagtgtccaga
gaggagatcttcgaggagtcgtatcgacaaataatgaagatgaggcccaaagacctgaag
aagcgtcttatggtaaagttcagaggagaggagggcctggattatggtggggtggccagg
gagtggctgtacctgctgtgtcatgagatgttgaacccatattatggcctgttccagtac
tccacggacaatatctacacactacagatcaaccctgactcctccatcaaccctgaccac
ctgtcgtattttcattttgtgggtcgtgtgatgggccttgcagttttccacggtcactac
atcaacgggagcttcacgttgcccttttacaaacagttgttaggcaaacccattcagctc
aacgacctggagaccacagacccggagttgcacaagagcctcgtctggatattagagaac
gacatcacatcagtccttgaccatacattctgcgtggagcacaatgcctttggaaagttt
tcacaacatgaactcaaacctaatgggcgtaatattcccgttactgaggagaacaagaaa
gaatatgtaagactttatgtgaactggagatttatgcgaggaattgaagcccagtttctg
gctttacagaagggattcagtgagctcatcccccagcacctcctcaaaccttttgaccat
aaagaactcgagttgatcatcggagggttggggaagattgaccttgcggactggaagacg
aacacccgcttaaaacactgcaccagtgaaagcaacgtggtgcggtggttctggcaggca
gtggaggccttcagtgaggagagaagaggacgtctgctgcagtttgtcacaggctccacc
agagtcccattacaggggtttaaagcactgcagggttctacaggttctgcaggaccaagg
ctctttaccatccacttgatagatgccaacacagataatctacccaaggctcacacatgt
tttaacaggatagacatcccaccctacgagtcttatgagaaactttatgagaaactgctg
acggctgtggaggagacctgcggctttgctgtggagtga
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