KEGG   Solea solea (common sole): 131475383
Entry
131475383         CDS       T10853                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe04137  Mitophagy - animal
ssoe04144  Endocytosis
ssoe04145  Phagosome
ssoe04148  Efferocytosis
ssoe05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    131475383 (rab5b)
   04145 Phagosome
    131475383 (rab5b)
   04137 Mitophagy - animal
    131475383 (rab5b)
   04148 Efferocytosis
    131475383 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    131475383 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssoe04131]
    131475383 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssoe04147]
    131475383 (rab5b)
   04031 GTP-binding proteins [BR:ssoe04031]
    131475383 (rab5b)
Membrane trafficking [BR:ssoe04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    131475383 (rab5b)
 Endosome - Lysosome transport
    131475383 (rab5b)
Exosome [BR:ssoe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   131475383 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   131475383 (rab5b)
  Exosomal proteins of colorectal cancer cells
   131475383 (rab5b)
  Exosomal proteins of melanoma cells
   131475383 (rab5b)
GTP-binding proteins [BR:ssoe04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    131475383 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 131475383
NCBI-ProteinID: XP_058509451
LinkDB
Position
2:38509792..38517396
AA seq 223 aa
MSSRGSGGRTNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGGSSSSGGN
NT seq 672 nt   +upstreamnt  +downstreamnt
atgagctccagagggagcggaggccgcaccaacggctcgctgccacagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaagggacagtttgacgagttccaggagacgaccataggagctgctttcttggct
cagtccgtgtgtctggatgacacgacagtgaagtttgagatctgggacaccgcgggtcag
gagcgataccacagcctcgctcccatgtattaccggggcgctcaggccgccatcgtcgtc
tttgacatcaccaagccggagacatttgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgtcatcgctctagccggaaacaaggccgacctggctgag
aagagactagtcgaatacgaggaagctcagacgtacgccgaagacaccggactgctcttc
atggagacgtccgcaaagacggccatgaacgtcaacgagctcttcctggccatcgcaaaa
aagatgccaaaaacagacacccagaacccgacacacgcagcgcggcatcggggagtcaac
ctgcaggacccggacgctcactccacccgagcctgctgcggcggcggcagcagcagcagc
ggcggcaactag

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