Solea solea (common sole): 131475383
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Entry
131475383 CDS
T10853
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04137
Mitophagy - animal
ssoe04144
Endocytosis
ssoe04145
Phagosome
ssoe04148
Efferocytosis
ssoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131475383 (rab5b)
04145 Phagosome
131475383 (rab5b)
04137 Mitophagy - animal
131475383 (rab5b)
04148 Efferocytosis
131475383 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131475383 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131475383 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssoe04147
]
131475383 (rab5b)
04031 GTP-binding proteins [BR:
ssoe04031
]
131475383 (rab5b)
Membrane trafficking [BR:
ssoe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
131475383 (rab5b)
Endosome - Lysosome transport
131475383 (rab5b)
Exosome [BR:
ssoe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131475383 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
131475383 (rab5b)
Exosomal proteins of colorectal cancer cells
131475383 (rab5b)
Exosomal proteins of melanoma cells
131475383 (rab5b)
GTP-binding proteins [BR:
ssoe04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
131475383 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
131475383
NCBI-ProteinID:
XP_058509451
LinkDB
All DBs
Position
2:38509792..38517396
Genome browser
AA seq
223 aa
AA seq
DB search
MSSRGSGGRTNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGGSSSSGGN
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagcggaggccgcaccaacggctcgctgccacagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaagggacagtttgacgagttccaggagacgaccataggagctgctttcttggct
cagtccgtgtgtctggatgacacgacagtgaagtttgagatctgggacaccgcgggtcag
gagcgataccacagcctcgctcccatgtattaccggggcgctcaggccgccatcgtcgtc
tttgacatcaccaagccggagacatttgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgtcatcgctctagccggaaacaaggccgacctggctgag
aagagactagtcgaatacgaggaagctcagacgtacgccgaagacaccggactgctcttc
atggagacgtccgcaaagacggccatgaacgtcaacgagctcttcctggccatcgcaaaa
aagatgccaaaaacagacacccagaacccgacacacgcagcgcggcatcggggagtcaac
ctgcaggacccggacgctcactccacccgagcctgctgcggcggcggcagcagcagcagc
ggcggcaactag
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