Solea solea (common sole): 131475948
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Entry
131475948 CDS
T10853
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03440
Homologous recombination
ssoe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131475948 (top3a)
03460 Fanconi anemia pathway
131475948 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoe03032
]
131475948 (top3a)
03400 DNA repair and recombination proteins [BR:
ssoe03400
]
131475948 (top3a)
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
131475948 (top3a)
DNA replication proteins [BR:
ssoe03032
]
Eukaryotic type
DNA Topoisomerases
131475948 (top3a)
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
131475948 (top3a)
FA (Fanconi anemia) pathway
131475948 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
HypA
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
131475948
NCBI-ProteinID:
XP_058510330
LinkDB
All DBs
Position
16:20695127..20709094
Genome browser
AA seq
1036 aa
AA seq
DB search
MQIVHSLGRSLLRPGLQLLGVQRRCLCAAQSSSSLTLTDTPQQADMIRSRAQIRRVLCVA
EKNDAAKGISEIMSSGRAIRREGLSKFNKLYEYDYHLFGQDVKVTMTSVSGHLLALEFEA
AFQKWHSCNPVLLFDAEVEKYCPDNMVQIKRTLEKEARQCQALVIWTDCDREGENIGFEV
INVCKAVKPNLQVFRAKFSEITPNSIRRACETLTEPDVNISDAVDARQELDLRIGASFTR
FQTLRLQKIFPEALANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEEN
VEFSWKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLASRKL
RISAKETMKIAEKLYTQGFISYPRTETNIFPANLALGPLVEQQTHSPVWGTFAQRVLDQP
GGPNPRQGKKSDQAHPPIHPTKYSSTLQGNEGRVYEFIVRHFLACVSQDALGQETVVDID
IAQEKFSASGLMIIARNYLDVYPYDRWSTKVIPVYEHGSQFQPSAIEMVDGQTSPPQLLT
EADLISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEM
SKPNLRSEFEADLKLVSEGRKDKRSVLLHHIQKYKAVFIESAKKAKKLDEALSTYLGAAH
EITEEEQLDMEIPLPVRKCPHCGRDMVLKKKREVNSKYLSCSGFPACKTAVWFPDTVLEV
SRDDSICPTCQPHPVHMLNFKFRRGSLPPMMSLEFVGCIGGCDETLREVLDLKYLRAGGG
GGGMGGGGGRGDPRPPAPRPRRQEQPRPRSNPRPSLPPVPSWNPQPRSPPGGGQRSVDPN
SDAIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPNQPGAPQSQGLPRPL
PAPVQTPRPSLGFSNTFGGGQGPEGGDGGHAGQTMCNCNETAVTRTVQKDGPNKGRIFHT
CGKPREQQCGFFQWADENVPPPGGFGGGFNGGRDEGKRGRKTTGGSAPNKPPAAKKARTC
GICHMPGHTRVTCPQR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagtgcattccctcggaagatccttgcttcgaccgggactacagcttctcggg
gtccagcggaggtgtctctgtgcagcacagagcagcagctctctgacactcactgacaca
ccacagcaggcggacatgatccggagccgggctcagatcaggcgggtgctctgcgtagcc
gagaagaacgatgcagcgaaaggcatctcagagatcatgtccagcggcagagccattagg
agggaaggactgtcaaagtttaacaaactctatgagtatgactatcacctctttggtcag
gatgtcaaagtaacaatgacatcggtttcaggtcatttactagccctggaatttgaagca
gctttccaaaaatggcacagttgcaatcctgtactgctatttgatgctgaggtggagaag
tattgtccggataacatggtacaaatcaagcggacactagagaaagaggcaaggcagtgc
caagctttagtcatctggactgattgtgacagagaaggagagaacattggttttgaagtc
ataaatgtctgcaaagcagtaaaacccaatttacaagttttccgggctaagttttctgaa
attacccccaattccattcggagagcttgtgaaactctgactgagccagatgttaacatc
agtgatgctgttgatgcacgtcaggagcttgacctgcggataggtgcatccttcactcga
ttccagacacttcgcctgcagaagatctttccagaggctctggccaatcagctgatctcg
tatggcagctgtcagtttcctactctgggatttgtggtggagcgtttcaaagccatccag
gcctttatacctgagactttctataagataaaggtgctgcatgaggtcgaagaggaaaat
gtagagtttagctggaaaagaaaccgtctcttcaaccacacggcctgcctggtgctctac
cagatctgcatggaggatcccatagcaacagtcacctcagtaaccagcaaacccaagagc
aagtggagaccgctgcctttggacactgtggaaatggagaaactggcatctcggaagcta
agaataagtgccaaagagactatgaaaattgcagaaaaactctatactcaagggttcatc
agctacccccgcactgagacaaacattttccctgcaaacctggctctcggccctctggtg
gagcagcagactcacagcccagtctgggggacgtttgcacagcgggtgctcgatcagcct
gggggccccaacccacgacagggcaagaagtctgaccaagcccatccccccatacacccc
acaaagtacagcagcacactgcagggaaatgaaggacgtgtttatgagttcattgttagg
cacttcctggcctgcgtatcccaggatgctttggggcaggagacggtggtggacatagac
attgctcaggagaagttctccgcctcaggacttatgatcattgcaaggaactatctggat
gtttacccatatgacagatggagtaccaaggtgattccggtgtatgaacacggctcccag
tttcagccttctgccatcgagatggtggatggacagacgagtcctcctcagctgctcact
gaagctgatctcatatcactgatggagaagcacggcattggcacagatgcgactcacgcg
gagcacattgagacgatcaagagtcgcatgtatgtcggcttgacggcggaccagagattt
ctccctggagagcttggaatggggctggtggagggttacaactccatgggttatgagatg
tccaaaccaaacctacgttctgaatttgaggcagacctgaagctggtgtctgagggcagg
aaggacaaacggagcgtgttgcttcaccacatccagaaatacaaagctgtcttcatcgag
tctgccaagaaggcaaagaagttagacgaagcgctgtcaacatatttgggtgccgctcat
gagatcactgaagaagagcagctggacatggagatcccactgccggtcaggaaatgtcca
cactgtggtcgggacatggtgctgaagaagaagagggaggttaacagtaagtacctgtcc
tgctcgggtttcccagcctgtaagacggcagtgtggttccctgacacagtgctggaggtc
agcagggatgacagcatttgtcccacctgtcagccacatcctgttcacatgttgaacttt
aagttccgcaggggcagcctccctccaatgatgtctttagaatttgttggctgcattgga
ggttgtgacgagacgctccgagaggtgctggacctgaaatatctcagagcaggaggagga
gggggtggaatgggaggaggtggaggaagaggtgaccctcggccaccagcaccgaggccc
cgccggcaagagcagcccagaccacgatccaatcctcgaccgtcccttccacctgtcccc
tcctggaatcctcagcctcgatctcccccaggcggaggccagagaagtgttgaccccaac
agtgatgctattgtgtgcaactgtggtcaggacgcacttctcctcactgtgcgaaaagac
ggtcctaatcaggggcgtcagttctacaagtgcaacgcagggagctgcaacttcttcctg
tgggcggatcaaccaaatcaacccggagcaccacagagtcaagggcttccacgtccactg
cccgcgcctgtgcagactccaaggccttcactggggttcagcaacacatttggaggcggt
caggggccagaagggggtgatggaggacatgctggacagacgatgtgtaactgtaatgag
acagcagtgacacgcacggtgcagaaggatggtccaaacaagggccggatattccacacc
tgtgggaaaccgagagaacagcagtgtggcttcttccaatgggctgatgagaatgtacct
ccaccaggtggttttggtggaggctttaatggcggcagagacgaagggaagagggggaga
aagacaacgggagggtccgcccctaacaaacctccagctgctaagaaagcccgtacctgc
ggcatctgccacatgcctggacacactcgtgtcacctgtccgcagcggtga
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